@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : DAPK1_HUMAN: (2015-10-06 )
MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFAARKKWKQSVRLISLCQRLSRSFLSRSNMSVARSDDTLDEEDSFVMKAIIHAINDDNVPGLQHLLGSLSNYDVNQPNKHGTPPLLIAAGCGNIQILQLLIKRGSRIDVQDKGGSNAVYWAARHGHVDTLKFLSENKCPLDVKDKSGEMALHVAARYGHADVAQLLCSFGSNPNIQDKEEETPLHCAAWHGYYSVAKALCEAGCNVNIKNREGETPLLTASARGYHDIVECLAEHGADLNACDKDGHIALHLAVRRCQMEVIKTLLSQGCFVDYQDRHGNTPLHVACKDGNMPIVVALCEANCNLDISNKYGRTPLHLAANNGILDVVRYLCLMGASVEALTTDGKTAEDLARSEQHEHVAGLLARLRKDTHRGLFIQQLRPTQNLQPRIKLKLFGHSGSGKTTLVESLKCGLLRSFFRRRRPRLSSTNSSRFPPSPLASKPTVSVSINNLYPGCENVSVRSRSMMFEPGLTKGMLEVFVAPTHHPHCSADDQSTKAIDIQNAYLNGVGDFSVWEFSGNPVYFCCYDYFAANDPTSIHVVVFSLEEPYEIQLNQVIFWLSFLKSLVPVEEPIAFGGKLKNPLQVVLVATHADIMNVPRPAGGEFGYDKDTSLLKEIRNRFGNDLHISNKLFVLDAGASGSKDMKVLRNHLQEIRSQIVSVCPPMTHLCEKIISTLPSWRKLNGPNQLMSLQQFVYDVQDQLNPLASEEDLRRIAQQLHSTGEINIMQSETVQDVLLLDPRWLCTNVLGKLLSVETPRALHHYRGRYTVEDIQRLVPDSDVEELLQILDAMDICARDLSSGTMVDVPALIKTDNLHRSWADEEDEVMVYGGVRIVPVEHLTPFPCGIFHKVQVNLCRWIHQQSTEGDADIRLWVNGCKLANRGAELLVLLVNHGQGIEVQVRGLETEKIKCCLLLDSVCSTIENVMATTLPGLLTVKHYLSPQQLREHHEPVMIYQPRDFFRAQTLKETSLTNTMGGYKESFSSIMCFGCHDVYSQASLGMDIHASDLNLLTRRKLSRLLDPPDPLGKDWCLLAMNLGLPDLVAKYNTSNGAPKDFLPSPLHALLREWTTYPESTVGTLMSKLRELGRRDAADFLLKASSVFKINLDGNGQEAYASSCNSGTSYNSISSVVSR

Atome Classification :

(54 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(3F5U)
DAPK1_HUMAN
[Raw transfer]




ANP_A_2(1JKL)
DAPK1_HUMAN
[Raw transfer]




ANP_A_3(3GU5)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2W4J)
DAPK1_HUMAN
[Raw transfer]




ANP_A_3(1IG1)
DAPK1_HUMAN
[Raw transfer]




ANP_A_2(3EHA)
DAPK1_HUMAN
[Raw transfer]




ANP_A_2(3GU4)
DAPK1_HUMAN
[Raw transfer]




ANP_B_2(3DFC)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(3EH9)
DAPK1_HUMAN
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ANP_A_3(1JKK)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(3GU7)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2W4K)
DAPK1_HUMAN
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ADP_A_2(3GU6)
DAPK1_HUMAN
[Raw transfer]




ACP_A_5(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ACP_C_12(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ACP_D_13(3ZXT)
DAPK1_HUMAN
[Raw transfer]




3GU_A_2(3GU8)
DAPK1_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




38G_A_2(4TXC)
DAPK1_HUMAN
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




GUB_A_2(3GUB)
DAPK1_HUMAN
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




STU_B_2(1WVY)
DAPK1_HUMAN
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




IQU_B_6(2CKE)
DAPK2_HUMAN
[Raw transfer]




4FT_A_8(4YO4)
DAPK1_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




EBD_A_2(3LM0)
ST17B_HUMAN
[Raw transfer]




DRG_A_2(1P4F)
DAPK1_HUMAN
[Raw transfer]




QPP_A_3(2JC6)
KCC1D_HUMAN
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




QPP_C_4(2JC6)
KCC1D_HUMAN
[Raw transfer]




DKG_A_4(4YPD)
DAPK1_HUMAN
[Raw transfer]




1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




OSV_A_2(2YAK)
DAPK1_HUMAN
[Raw transfer]




PGE_A_2(4UV0)
?
[Raw transfer]




QUE_A_2(3LM5)
ST17B_HUMAN
[Raw transfer]




16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]




16X_B_8(2X4F)
MYLK4_HUMAN
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




15 PsiBlast_PDB 88.92100% -75 - C1 -4TXC 8.5 DAPK1_HUMAN
8 PsiBlast_PDB 88.88100% -73 - C1 -2Y0A 2.8 DAPK1_HUMAN
7 PsiBlast_PDB 88.17100% -71 - C1 -2W4K 5.8 DAPK1_HUMAN
3 PsiBlast_PDB 87.8099% -69 - C1 -2XUU 5.9 DAPK1_HUMAN
5 PsiBlast_PDB 87.7699% -71 - C1 -4UV0 2.0 ?
10 PsiBlast_PDB 86.95100% -76 - C1 -2YAK 9.4 DAPK1_HUMAN
36 PsiBlast_CBE 86.84100% -78 - C1 -1WVY 8.1 DAPK1_HUMAN
29 PsiBlast_CBE 86.7697% -76 - C1 -3GUB 5.5 DAPK1_HUMAN
27 PsiBlast_CBE 86.4497% -73 - C1 -3EHA 7.4 DAPK1_HUMAN
31 PsiBlast_CBE 86.4297% -72 - C1 -3GU7 5.7 DAPK1_HUMAN
2 PsiBlast_PDB 86.2799% -68 - C1 -4B4L 2.5 DAPK1_HUMAN
16 PsiBlast_PDB 86.2397% -73 - C1 -1IG1 6.5 DAPK1_HUMAN
13 PsiBlast_PDB 85.9597% -75 - C1 -3DFC 7.3 DAPK1_HUMAN
20 PsiBlast_PDB 85.9397% -75 - C1 -1JKK 5.2 DAPK1_HUMAN
24 PsiBlast_CBE 85.7497% -71 - C1 -4YPD 2.8 DAPK1_HUMAN
30 PsiBlast_CBE 85.7297% -75 - C1 -3GU8 5.0 DAPK1_HUMAN
25 PsiBlast_CBE 85.6197% -71 - C1 -4YO4 4.0 DAPK1_HUMAN
17 PsiBlast_PDB 85.4697% -73 - C1 -1JKL 5.9 DAPK1_HUMAN
32 PsiBlast_CBE 85.2297% -73 - C1 -3GU6 4.9 DAPK1_HUMAN
34 PsiBlast_CBE 85.1697% -72 - C1 -3GU4 5.8 DAPK1_HUMAN
9 PsiBlast_PDB 85.0697% -69 - C1 -3F5U 6.3 DAPK1_HUMAN
38 PsiBlast_CBE 85.00100% -74 - C1 -2W4J 5.6 DAPK1_HUMAN
33 PsiBlast_CBE 84.5497% -71 - C1 -3GU5 5.3 DAPK1_HUMAN
22 PsiBlast_CBE 84.29100% -89 - C1 -3ZXT 4.0 DAPK1_HUMAN
28 PsiBlast_CBE 84.1497% -74 - C1 -3EH9 5.6 DAPK1_HUMAN
35 PsiBlast_CBE 83.6697% -72 - C1 -1P4F 5.2 DAPK1_HUMAN
23 PsiBlast_CBE 83.37100% -80 - C1 -3ZXT 4.1 DAPK1_HUMAN
12 PsiBlast_PDB 82.68100% -81 - C1 -3ZXT 4.1 DAPK1_HUMAN
46 PsiBlast_CBE 82.6473% -74 - C1 -2CKE 4.2 DAPK2_HUMAN
47 PsiBlast_CBE 82.2573% -72 - C1 -2CKE 4.1 DAPK2_HUMAN
45 PsiBlast_CBE 81.6873% -71 - C1 -2CKE 4.2 DAPK2_HUMAN
44 PsiBlast_CBE 81.6073% -70 - C1 -2CKE 4.3 DAPK2_HUMAN
40 PsiBlast_CBE 80.4872% -69 - C1 -2YAA 5.9 DAPK2_MOUSE
41 PsiBlast_CBE 79.6372% -70 - C1 -2YAA 5.2 DAPK2_MOUSE
60 PsiBlast_CBE 67.5249% -68 - C1 -3LM5 5.6 ST17B_HUMAN
61 PsiBlast_CBE 66.3449% -66 - C1 -3LM0 6.7 ST17B_HUMAN
73 PsiBlast_CBE 65.5839% -70 - C1 -4FG8 6.0 KCC1A_HUMAN
72 PsiBlast_CBE 65.5839% -68 - C1 -4FG8 4.7 KCC1A_HUMAN
68 PsiBlast_CBE 64.5636% -62 - C1 -2JC6 6.8 KCC1D_HUMAN
67 PsiBlast_CBE 63.7336% -61 - C1 -2JC6 6.9 KCC1D_HUMAN
63 PsiBlast_CBE 63.6044% -74 - C1 -2X4F 6.0 MYLK4_HUMAN
75 PsiBlast_CBE 63.3940% -80 - C1 -4FG7 4.4 KCC1A_HUMAN
76 PsiBlast_CBE 63.3738% -59 - C1 -2JAM 4.1 KCC1G_HUMAN
77 PsiBlast_CBE 62.6738% -58 - C1 -2JAM 4.5 KCC1G_HUMAN
79 PsiBlast_CBE 62.3134% -62 - C1 -2WEL 5.0 KCC2D_HUMAN
64 PsiBlast_CBE 61.9444% -69 - C1 -2X4F 6.4 MYLK4_HUMAN
81 PsiBlast_CBE 61.4934% -55 - C1 -2VN9 6.3 KCC2D_HUMAN
84 PsiBlast_CBE 61.1935% -60 - C1 -3MFS 4.2 CSKP_HUMAN
80 PsiBlast_CBE 61.1534% -54 - C1 -2VN9 6.6 KCC2D_HUMAN
69 PsiBlast_CBE 61.1238% -62 - C1 -2W4O 3.9 KCC4_HUMAN
85 PsiBlast_CBE 60.9635% -59 - C1 -3MFR 3.7 CSKP_HUMAN
83 PsiBlast_CBE 60.8535% -56 - C1 -3MFU 4.6 CSKP_HUMAN
71 PsiBlast_CBE 60.4838% -59 - C1 -4FG9 5.8 KCC1A_HUMAN
70 PsiBlast_CBE 60.0638% -60 - C1 -4FG9 5.7 KCC1A_HUMAN