@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : DCLK2_HUMAN: (2015-10-06 )
MASTRSIELEHFEERDKRPRPGSRRGAPSSSGGSSSSGPKGNGLIPSPAHSAHCSFYRTRTLQALSSEKKAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLIELTRSLSDNVNLPQGVRTIYTIDGSRKVTSLDELLEGESYVCASNEPFRKVDYTKNINPNWSVNIKGGTSRALAAASSVKSEVKESKDFIKPKLVTVIRSGVKPRKAVRILLNKKTAHSFEQVLTDITEAIKLDSGVVKRLCTLDGKQVTCLQDFFGDDDVFIACGPEKFRYAQDDFVLDHSECRVLKSSYSRSSAVKYSGSKSPGPSRRSKSPASVNGTPSSQLSTPKSTKSSSSSPTSPGSFRGLKQISAHGRSSSNVNGGPELDRCISPEGVNGNRCSESSTLLEKYKIGKVIGDGNFAVVKECIDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLVEEMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHGLSIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVVEGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQVNVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPKQNSTTTGVSVIMNTALDKEGQIFCSKHCQDSGRPGMEPISPVPPSVEEIPVPGEAVPAPTPPESPTPHPPPAAPGGERAGTWRRHRD

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_B_2(1QL6)
PHKG1_RABIT
[Raw transfer]




ACP_A_5(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ATP_A_4(1PHK)
PHKG1_RABIT
[Raw transfer]




ADP_A_2(2W4J)
DAPK1_HUMAN
[Raw transfer]




ACP_C_12(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ATP_A_5(2PHK)
PHKG1_RABIT
[Raw transfer]




ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




ADP_A_2(2W4K)
DAPK1_HUMAN
[Raw transfer]




ACP_B_10(3ZXT)
DAPK1_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




38G_A_2(4TXC)
DAPK1_HUMAN
[Raw transfer]




ACP_D_13(3ZXT)
DAPK1_HUMAN
[Raw transfer]




STU_B_2(1WVY)
DAPK1_HUMAN
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




0JH_A_2(4D9U)

[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




0JG_A_2(4D9T)

[Raw transfer]




B49_A_5(2Y7J)
PHKG2_HUMAN
[Raw transfer]




QPP_A_3(2JC6)
KCC1D_HUMAN
[Raw transfer]




QPP_C_4(2JC6)
KCC1D_HUMAN
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




OSV_A_2(2YAK)
DAPK1_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]




PGE_A_2(4UV0)
?
[Raw transfer]




CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_B_12(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_B_10(4CZU)
CIPKN_ARATH
[Raw transfer]




13 PsiBlast_PDB 82.1339%-118 - C1 -2WEL 5.1 KCC2D_HUMAN
10 PsiBlast_PDB 81.8940%-107 - C1 -3BHH 5.9 KCC2B_HUMAN
25 PsiBlast_CBE 81.7740%-109 - C1 -3BHH 5.6 KCC2B_HUMAN
6 PsiBlast_PDB 81.0143%-116 - C1 -4FG7 4.4 KCC1A_HUMAN
21 PsiBlast_CBE 80.9342%-114 - C1 -4FG8 4.3 KCC1A_HUMAN
7 PsiBlast_PDB 79.3242%-102 - C1 -2JC6 3.8 KCC1D_HUMAN
3 PsiBlast_PDB 78.7342%-108 - C1 -4FG8 5.5 KCC1A_HUMAN
34 PsiBlast_CBE 78.1240%-117 - C1 -2Y7J 5.7 PHKG2_HUMAN
22 PsiBlast_CBE 78.0642%-101 - C1 -4FG9 5.8 KCC1A_HUMAN
9 PsiBlast_PDB 77.9737% -94 - C1 -2V7O 4.8 KCC2G_HUMAN
23 PsiBlast_CBE 77.7042%-103 - C1 -2JC6 4.0 KCC1D_HUMAN
65 PsiBlast_CBE 77.4038%-108 - C1 -2W4K 5.2 DAPK1_HUMAN
33 PsiBlast_CBE 77.3540%-117 - C1 -2Y7J 6.2 PHKG2_HUMAN
35 PsiBlast_CBE 77.2640%-117 - C1 -2Y7J 6.5 PHKG2_HUMAN
27 PsiBlast_CBE 77.2239%-102 - C1 -2VN9 5.3 KCC2D_HUMAN
53 PsiBlast_CBE 77.1338%-114 - C1 -1QL6 5.5 PHKG1_RABIT
77 PsiBlast_CBE 76.8639%-118 - C1 -2PHK 5.0 PHKG1_RABIT
67 PsiBlast_CBE 76.6736%-109 - C1 -2Y0A 2.3 DAPK1_HUMAN
14 PsiBlast_PDB 76.6439%-103 - C1 -2VN9 5.0 KCC2D_HUMAN
60 PsiBlast_CBE 76.6338%-117 - C1 -1PHK 5.1 PHKG1_RABIT
8 PsiBlast_PDB 76.5638%-100 - C1 -2JAM 4.4 KCC1G_HUMAN
4 PsiBlast_PDB 76.3942% -97 - C1 -4FG9 5.7 KCC1A_HUMAN
74 PsiBlast_CBE 75.8338%-109 - C1 -2YAK 6.6 DAPK1_HUMAN
49 PsiBlast_CBE 75.6137%-106 - C1 -2YAA 5.3 DAPK2_MOUSE
61 PsiBlast_CBE 75.5638%-107 - C1 -4B4L 1.9 DAPK1_HUMAN
50 PsiBlast_CBE 75.4637%-108 - C1 -2YAA 4.1 DAPK2_MOUSE
75 PsiBlast_CBE 75.3236%-110 - C1 -4TXC 6.6 DAPK1_HUMAN
78 PsiBlast_CBE 75.0737%-110 - C1 -1WVY 5.3 DAPK1_HUMAN
70 PsiBlast_CBE 74.9838%-118 - C1 -3ZXT 3.7 DAPK1_HUMAN
15 PsiBlast_PDB 74.8037% -97 - C1 -2W4O 4.7 KCC4_HUMAN
24 PsiBlast_CBE 74.7838% -99 - C1 -2JAM 4.7 KCC1G_HUMAN
80 PsiBlast_CBE 74.5437%-110 - C1 -2W4J 4.9 DAPK1_HUMAN
76 PsiBlast_CBE 74.4538%-109 - C1 -4UV0 2.2 ?
62 PsiBlast_CBE 72.8338%-108 - C1 -2XUU 5.2 DAPK1_HUMAN
42 PsiBlast_CBE 72.7438%-109 - C1 -4CZT 4.2 CIPKN_ARATH
46 PsiBlast_CBE 72.2238%-112 - C1 -4CZU 5.4 CIPKN_ARATH
40 PsiBlast_CBE 72.1338%-112 - C1 -4CZT - CIPKN_ARATH
41 PsiBlast_CBE 72.1038%-108 - C1 -4CZT 4.8 CIPKN_ARATH
44 PsiBlast_CBE 71.7438%-112 - C1 -4CZU - CIPKN_ARATH
19 PsiBlast_PDB 71.5639%-104 - C1 -2WEI 5.6 ?
45 PsiBlast_CBE 71.3938%-108 - C1 -4CZU 4.7 CIPKN_ARATH
39 PsiBlast_CBE 71.0538%-111 - C1 -4CZT - CIPKN_ARATH
71 PsiBlast_CBE 70.3138%-112 - C1 -3ZXT 4.1 DAPK1_HUMAN
72 PsiBlast_CBE 69.6338%-106 - C1 -3ZXT 7.2 DAPK1_HUMAN
73 PsiBlast_CBE 68.2738%-105 - C1 -3ZXT 4.6 DAPK1_HUMAN
37 PsiBlast_CBE 67.7638%-109 - C1 -4D9T 6.2
36 PsiBlast_CBE 67.4538%-111 - C1 -4D9U 6.5