@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : DMPK_HUMAN: (2015-10-06 )
MSAEVRLRRLQQLVLDPGFLGLEPLLDLLLGVHQELGASELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIREGAPLGVHLPFVGYSYSCMALRDSEVPGPTPMELEAEQLLEPHVQAPSLEPSVSPQDETAEVAVPAAVPAAEAEAEVTLRELQEALEEEVLTRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQAEGATAVTGVPSPRATDPPSHLDGPPAVAVGQCPLVGPGPMHRRHLLLPARVPRPGLSEALSLLLFAVVLSRAAALGCIGLVAHAGQLTAVWRRPGAARAP

Atome Classification :

(53 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2EA_C_3(2F7E)
KAPCA_BOVIN
[Raw transfer]




2PY_C_3(2OH0)
KAPCA_BOVIN
[Raw transfer]




L20_E_3(2UZU)
KAPCA_BOVIN
[Raw transfer]




M77_E_5(2F2U)
ROCK2_BOVIN
[Raw transfer]




4KK_A_3(4YVE)
ROCK1_HUMAN
[Raw transfer]




SS4_E_3(2UZW)
KAPCA_BOVIN
[Raw transfer]




SS3_A_3(2UZT)
KAPCA_BOVIN
[Raw transfer]




4EA_C_3(2F7X)
KAPCA_BOVIN
[Raw transfer]




ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]




4KK_B_4(4YVE)
ROCK1_HUMAN
[Raw transfer]




ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]




6EA_C_3(2F7Z)
KAPCA_BOVIN
[Raw transfer]




SS5_A_3(2UZV)
KAPCA_BOVIN
[Raw transfer]




ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




4KH_B_4(4YVC)
ROCK1_HUMAN
[Raw transfer]




4PY_C_3(2OJF)
KAPCA_BOVIN
[Raw transfer]




HFS_D_4(2ETK)
ROCK1_HUMAN
[Raw transfer]




M77_C_3(2ESM)
ROCK1_HUMAN
[Raw transfer]




M77_D_4(2ESM)
ROCK1_HUMAN
[Raw transfer]




4KH_A_3(4YVC)
ROCK1_HUMAN
[Raw transfer]




M77_G_7(2F2U)
ROCK2_BOVIN
[Raw transfer]




07U_A_2(3TXO)

[Raw transfer]




M77_A_3(3TKU)
MRCKB_HUMAN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




4TW_B_4(5BML)
ROCK1_HUMAN
[Raw transfer]




H52_B_4(3D9V)
ROCK1_HUMAN
[Raw transfer]




ADP_A_2(4UAK)
MRCKB_HUMAN
[Raw transfer]




M77_B_6(3TKU)
MRCKB_HUMAN
[Raw transfer]




H52_A_3(3D9V)
ROCK1_HUMAN
[Raw transfer]




3FV_A_2(4UAL)
MRCKB_HUMAN
[Raw transfer]




MMG_A_2(3HDM)
SGK1_HUMAN
[Raw transfer]




Y27_C_3(2ETR)
ROCK1_HUMAN
[Raw transfer]




HFS_C_3(2ETK)
ROCK1_HUMAN
[Raw transfer]




4TW_A_3(5BML)
ROCK1_HUMAN
[Raw transfer]




583_A_2(5D9L)
?
[Raw transfer]




5FI_A_2(4L43)
KS6B1_HUMAN
[Raw transfer]




ANP_A_5(2V55)
ROCK1_HUMAN
[Raw transfer]




2NS_A_2(4NW6)
KS6A3_HUMAN
[Raw transfer]




Y27_C_3(2H9V)
ROCK2_BOVIN
[Raw transfer]




Y27_D_4(2ETR)
ROCK1_HUMAN
[Raw transfer]




FS9_A_3(3WF7)
KS6B1_HUMAN
[Raw transfer]




2NK_A_2(4NUS)
KS6A3_HUMAN
[Raw transfer]




GMG_A_2(3HDN)
SGK1_HUMAN
[Raw transfer]




1WU_B_4(4L6Q)
ROCK2_HUMAN
[Raw transfer]




1WU_A_3(4L6Q)
ROCK2_HUMAN
[Raw transfer]




NM7_B_5(3QFV)
MRCKB_HUMAN
[Raw transfer]




NM7_A_3(3QFV)
MRCKB_HUMAN
[Raw transfer]




2NR_A_2(4NW5)
KS6A3_HUMAN
[Raw transfer]




5FI_A_5(4L44)
KS6B1_HUMAN
[Raw transfer]




EDO_A_5(4AW2)
MRCKA_RAT
[Raw transfer]




EDO_A_5(4AW2)
MRCKA_RAT
[Raw transfer]




ADE_A_3(4DC2)
KPCI_MOUSE
[Raw transfer]




SL0_A_2(3UBD)
KS6A3_MOUSE
[Raw transfer]




EDO_B_8(3TKU)
MRCKB_HUMAN
[Raw transfer]




EDO_A_5(4UAL)
MRCKB_HUMAN
[Raw transfer]




EDO_A_7(4UAK)
MRCKB_HUMAN
[Raw transfer]




EDO_B_10(3QFV)
MRCKB_HUMAN
[Raw transfer]




5 PsiBlast_PDB 80.6159%-124 - C2 -4UAK 5.1 MRCKB_HUMAN
6 PsiBlast_PDB 80.1459%-120 - C2 -4UAL 6.9 MRCKB_HUMAN
3 PsiBlast_PDB 79.8059%-119 - C2 -3QFV 3.9 MRCKB_HUMAN
88 HHSearch 79.3162%-120 - C2 -4AW2 2.3 MRCKA_RAT
2 PsiBlast_PDB 78.9659%-116 - C2 -4AW2 2.3 MRCKA_RAT
22 PsiBlast_CBE 77.4259%-115 - C2 -3QFV 5.0 MRCKB_HUMAN
23 PsiBlast_CBE 77.1959%-115 - C2 -3TKU 5.2 MRCKB_HUMAN
4 PsiBlast_PDB 76.7559%-113 - C2 -3TKU 4.8 MRCKB_HUMAN
13 PsiBlast_PDB 73.3244%-119 - C2 -4YVC 4.8 ROCK1_HUMAN
54 PsiBlast_CBE 73.2243%-117 - C2 -2F2U 5.1 ROCK2_BOVIN
55 PsiBlast_CBE 72.8643%-120 - C2 -2F2U 4.7 ROCK2_BOVIN
26 PsiBlast_CBE 72.6844%-117 - C2 -4YVC 5.1 ROCK1_HUMAN
33 PsiBlast_CBE 72.2144%-114 - C2 -2ETK 4.4 ROCK1_HUMAN
14 PsiBlast_PDB 72.0644%-120 - C2 -4YVE 5.3 ROCK1_HUMAN
15 PsiBlast_PDB 71.8944%-120 - C2 -5BML 6.1 ROCK1_HUMAN
34 PsiBlast_CBE 71.8344%-114 - C2 -2ESM 4.7 ROCK1_HUMAN
24 PsiBlast_CBE 71.8244%-117 - C2 -5BML 6.4 ROCK1_HUMAN
31 PsiBlast_CBE 71.7344%-116 - C2 -3D9V 5.6 ROCK1_HUMAN
9 PsiBlast_PDB 71.7144%-116 - C2 -2ETR 4.5 ROCK1_HUMAN
32 PsiBlast_CBE 71.6544%-115 - C2 -2ETR 4.6 ROCK1_HUMAN
48 PsiBlast_CBE 71.0643%-121 - C2 -4L6Q 5.2 ROCK2_HUMAN
10 PsiBlast_PDB 71.0544%-118 - C2 -3D9V 5.5 ROCK1_HUMAN
25 PsiBlast_CBE 70.9844%-119 - C2 -4YVE 5.1 ROCK1_HUMAN
47 PsiBlast_CBE 70.8443%-116 - C2 -4L6Q 4.5 ROCK2_HUMAN
7 PsiBlast_PDB 70.7144%-115 - C2 -2ESM 4.8 ROCK1_HUMAN
53 PsiBlast_CBE 70.5643%-109 - C2 -2H9V 5.1 ROCK2_BOVIN
8 PsiBlast_PDB 70.1144%-118 - C2 -2ETK 4.2 ROCK1_HUMAN
20 PsiBlast_PDB 69.1144%-113 - C2 -2V55 4.0 ROCK1_HUMAN
91 HHSearch 61.8840%-115 * C2 *4GV1 6.2 AKT1_HUMAN
94 HHSearch 61.6437%-111 - C2 -1RDQ 7.3 KAPCA_MOUSE
104 HHSearch 60.1638%-108 - C2 -3WF7 6.9 KS6B1_HUMAN
60 PsiBlast_CBE 59.0135%-103 - C2 -2F7X 5.8 KAPCA_BOVIN
61 PsiBlast_CBE 58.7035%-106 - C2 -2F7E 5.9 KAPCA_BOVIN
57 PsiBlast_CBE 58.6435%-107 - C2 -2OJF 5.8 KAPCA_BOVIN
69 PsiBlast_CBE 58.3636%-115 - C2 -2UZT 6.7 KAPCA_BOVIN
93 HHSearch 58.1540%-109 - C2 -3TXO 6.6
76 PsiBlast_CBE 57.9234%-102 - C2 -4L43 5.5 KS6B1_HUMAN
58 PsiBlast_CBE 57.2035%-105 - C2 -2OH0 6.8 KAPCA_BOVIN
59 PsiBlast_CBE 56.6635%-110 - C2 -2F7Z 5.6 KAPCA_BOVIN
68 PsiBlast_CBE 56.6536%-113 - C2 -2UZU 5.3 KAPCA_BOVIN
92 HHSearch 56.6339%-121 - C2 -2R5T 6.7 SGK1_HUMAN
67 PsiBlast_CBE 56.6136%-108 - C2 -2UZV 6.2 KAPCA_BOVIN
66 PsiBlast_CBE 55.8836%-113 - C2 -2UZW 4.3 KAPCA_BOVIN
75 PsiBlast_CBE 55.8434% -97 - C2 -4L44 4.0 KS6B1_HUMAN
71 PsiBlast_CBE 54.6436% -94 - C2 -5D9L 5.1 ?
72 PsiBlast_CBE 54.3736% -96 - C2 -4NW6 7.7 KS6A3_HUMAN
73 PsiBlast_CBE 53.5136% -98 - C2 -4NW5 7.1 KS6A3_HUMAN
110 HHSearch 53.3639%-113 - C2 -3UBD 6.0 KS6A3_MOUSE
64 PsiBlast_CBE 53.2236%-110 - C2 -3HDM 6.9 SGK1_HUMAN
98 HHSearch 53.0337%-104 - C2 -4DC2 3.1 KPCI_MOUSE
65 PsiBlast_CBE 52.3136%-112 - C2 -2R5T 6.6 SGK1_HUMAN
63 PsiBlast_CBE 50.5836%-106 - C2 -3HDN 7.4 SGK1_HUMAN
74 PsiBlast_CBE 50.1336% -96 - C2 -4NUS 7.9 KS6A3_HUMAN