@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : DYRK4_HUMAN: (2015-10-06 )
MPASELKASEIPFHPSIKTQDPKAEEKSPKKQKVTLTAAEALKLFKNQLSPYEQSEILGYAELWFLGLEAKKLDTAPEKFSKTSFDDEHGFYLKVLHDHIAYRYEVLETIGKGSFGQVAKCLDHKNNELVALKIIRNKKRFHQQALMELKILEALRKKDKDNTYNVVHMKDFFYFRNHFCITFELLGINLYELMKNNNFQGFSLSIVRRFTLSVLKCLQMLSVEKIIHCDLKPENIVLYQKGQASVKVIDFGSSCYEHQKVYTYIQSRFYRSPEVILGHPYDVAIDMWSLGCITAELYTGYPLFPGENEVEQLACIMEVLGLPPAGFIQTASRRQTFFDSKGFPKNITNNRGKKRYPDSKDLTMVLKTYDTSFLDFLRRCLVWEPSLRMTPDQALKHAWIHQSRNLKPQPRPQTLRKSNSFFPSETRKDKVQGCHHSSRKADEITKETTEKTKDSPTKHVQHSGDQQDCLQHGADTVQLPQLVDAPKKSEAAVGAEVSMTSPGQSKNFSLKNTNVLPPIV

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(3LLT)
?
[Raw transfer]




ANP_A_4(3LLT)
?
[Raw transfer]




ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]




ANP_A_3(4IIR)
PRP4B_HUMAN
[Raw transfer]




D15_A_4(2WO6)
DYR1A_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




NR9_B_5(3NR9)
CLK2_HUMAN
[Raw transfer]




NR9_A_4(3NR9)
CLK2_HUMAN
[Raw transfer]




ANP_A_7(1Q99)
SKY1_YEAST
[Raw transfer]




3RA_B_4(3RAW)
CLK3_HUMAN
[Raw transfer]




NR9_C_6(3NR9)
CLK2_HUMAN
[Raw transfer]




3RA_A_3(3RAW)
CLK3_HUMAN
[Raw transfer]




D15_B_5(2WO6)
DYR1A_HUMAN
[Raw transfer]




3RA_A_7(4AZE)
DYR1A_HUMAN
[Raw transfer]




ANP_B_8(1Q99)
SKY1_YEAST
[Raw transfer]




DBQ_A_2(1Z57)
CLK1_HUMAN
[Raw transfer]




DBQ_A_2(1Z57)
CLK1_HUMAN
[Raw transfer]




3RA_A_2(4AZF)
DYRK2_HUMAN
[Raw transfer]




IRB_A_2(3KVW)
DYRK2_HUMAN
[Raw transfer]




IRB_A_2(3KVW)
DYRK2_HUMAN
[Raw transfer]




V25_A_2(2VAG)
CLK1_HUMAN
[Raw transfer]




4E2_A_20(4YLK)
DYR1A_HUMAN
[Raw transfer]




V25_A_2(2WU7)
CLK3_HUMAN
[Raw transfer]




ADN_B_9(1Q97)
?
[Raw transfer]




DKI_A_2(2WU6)
CLK3_HUMAN
[Raw transfer]




ADE_B_13(1Q8Y)
?
[Raw transfer]




EDO_I_9(1HOW)
SKY1_YEAST
[Raw transfer]




73 HHSearch 89.6457%-111 * C1 *3KVW 7.2 DYRK2_HUMAN
2 PsiBlast_PDB 89.2954%-113 - C1 -4AZF 6.1 DYRK2_HUMAN
1 PsiBlast_PDB 88.1853%-112 - C1 -3KVW 7.2 DYRK2_HUMAN
32 PsiBlast_CBE 80.5644%-127 - C1 -2WO6 7.2 DYR1A_HUMAN
16 PsiBlast_PDB 77.4444%-128 - C1 -4AZE 6.7 DYR1A_HUMAN
8 PsiBlast_PDB 77.4044%-124 - C1 -2WO6 7.3 DYR1A_HUMAN
17 PsiBlast_PDB 69.3833%-105 - C1 -2WU6 6.4 CLK3_HUMAN
78 HHSearch 69.0033%-110 - C1 -4IIR 5.1 PRP4B_HUMAN
76 HHSearch 68.1435%-112 - C1 -1Z57 4.7 CLK1_HUMAN
51 PsiBlast_CBE 68.1431%-110 - C1 -3NR9 7.0 CLK2_HUMAN
18 PsiBlast_PDB 68.0533%-106 - C1 -2WU7 5.1 CLK3_HUMAN
47 PsiBlast_CBE 68.0033%-105 - C1 -3RAW 5.8 CLK3_HUMAN
52 PsiBlast_CBE 67.9733%-115 - C1 -1Z57 4.7 CLK1_HUMAN
50 PsiBlast_CBE 67.4231%-113 - C1 -3NR9 6.8 CLK2_HUMAN
19 PsiBlast_PDB 67.0033%-103 - C1 -3RAW 7.2 CLK3_HUMAN
49 PsiBlast_CBE 66.6731%-110 - C1 -3NR9 7.1 CLK2_HUMAN
53 PsiBlast_CBE 66.5433%-114 - C1 -2VAG 6.2 CLK1_HUMAN
54 PsiBlast_CBE 65.6931%-106 - C1 -3LLT 7.3 ?
60 PsiBlast_CBE 64.4731% -94 - C1 -1Q8Y 4.0 ?
86 HHSearch 64.2732%-123 - C1 -4BGQ 7.5 CDKL5_HUMAN
79 HHSearch 64.2632%-105 - C1 -3LLT 7.3 ?
57 PsiBlast_CBE 62.4231% -89 - C1 -1Q97 3.6 ?
55 PsiBlast_CBE 61.2431% -89 - C1 -1Q99 5.3 SKY1_YEAST
63 PsiBlast_CBE 60.7131% -93 - C1 -1HOW 2.6 SKY1_YEAST
56 PsiBlast_CBE 60.7031% -92 - C1 -1Q99 5.8 SKY1_YEAST
13 PsiBlast_PDB 60.4444% -84 - C1 -4YLK 6.4 DYR1A_HUMAN