@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : E2AK2_HUMAN: (2015-10-06 )
MAGDLSAGFFMEELNTYRQKQGVVLKYQELPNSGPPHDRRFTFQVIIDGREFPEGEGRSKKEAKNAAAKLAVEILNKEKKAVSPLLLTTTNSSEGLSMGNYIGLINRIAQKKRLTVNYEQCASGVHGPEGFHYKCKMGQKEYSIGTGSTKQEAKQLAAKLAYLQILSEETSVKSDYLSSGSFATTCESQSNSLVTSTLASESSSEGDFSADTSEINSNSDSLNSSSLLMNGLRNNQRKAKRSLAPRFDLPDMKETKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHTC

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]



ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]



SAP_A_2(2W5B)
NEK2_HUMAN
[Raw transfer]



VGK_A_2(2WQO)
NEK2_HUMAN
[Raw transfer]



3Z2_A_2(4X7H)

[Raw transfer]



4VQ_A_2(2XKC)
NEK2_HUMAN
[Raw transfer]



OL2_A_2(2XK4)
NEK2_HUMAN
[Raw transfer]



XK3_A_2(2XK3)
NEK2_HUMAN
[Raw transfer]



3Z3_A_2(4X7K)

[Raw transfer]



3Z1_A_2(4X7J)

[Raw transfer]



5R1_A_2(2XK8)
NEK2_HUMAN
[Raw transfer]



3Z4_A_2(4X7L)

[Raw transfer]



T3M_A_2(2XKD)
NEK2_HUMAN
[Raw transfer]



30E_A_2(2XK7)
NEK2_HUMAN
[Raw transfer]



ATP_A_7(1ZYD)
GCN2_YEAST
[Raw transfer]



430_A_2(2XNN)
NEK2_HUMAN
[Raw transfer]



3Z5_A_2(4X7N)

[Raw transfer]



ANP_A_5(1ZY5)
GCN2_YEAST
[Raw transfer]



WCX_A_2(2XNP)
NEK2_HUMAN
[Raw transfer]



BX1_A_2(2XKF)
NEK2_HUMAN
[Raw transfer]



ATP_B_8(1ZYD)

[Raw transfer]



WI2_A_2(2XKE)
NEK2_HUMAN
[Raw transfer]



EQH_A_2(2XK6)
NEK2_HUMAN
[Raw transfer]



GOL_C_3(1ZY4)
GCN2_YEAST
[Raw transfer]



ED8_A_2(2XNO)
NEK2_HUMAN
[Raw transfer]



GOL_C_3(1ZY4)
GCN2_YEAST
[Raw transfer]



GOL_A_4(4X7K)

[Raw transfer]



GOL_D_4(1ZY4)

[Raw transfer]



0WH_A_3(4G31)

[Raw transfer]



WGZ_A_2(2XNM)
NEK2_HUMAN
[Raw transfer]



0WH_A_3(4G31)

[Raw transfer]



3Z6_A_2(4X7O)

[Raw transfer]



ANP_C_10(2A19)
E2AK2_HUMAN
[Raw transfer]



GOL_A_4(4X7L)

[Raw transfer]



27D_A_2(4M7I)

[Raw transfer]



ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]



GOL_A_14(2XNO)
NEK2_HUMAN
[Raw transfer]



5Z5_A_2(2JAV)
NEK2_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
51 HHSearch 79.3699% -91 - C2 -2A19 4.6 E2AK2_HUMAN
2 PsiBlast_PDB 78.3494% -91 - C2 -2A19 4.6 E2AK2_HUMAN
21 PsiBlast_CBE 73.7194% -99 - C2 -2A19 4.1 E2AK2_HUMAN
8 PsiBlast_PDB 66.9838% -91 - C2 -4X7N 11.6
6 PsiBlast_PDB 66.4238% -91 - C2 -4X7K 11.5
10 PsiBlast_PDB 66.1138% -94 - C2 -4X7H 9.4
13 PsiBlast_PDB 66.0938% -97 - C2 -4M7I 9.5
7 PsiBlast_PDB 65.9838% -89 - C2 -4X7L 11.2
5 PsiBlast_PDB 65.9738% -96 - C2 -4X7J 9.9
53 HHSearch 65.3543% -88 - C2 -4G31 10.4
12 PsiBlast_PDB 65.0338% -96 - C2 -4G31 10.4
9 PsiBlast_PDB 64.7838% -93 - C2 -4X7O 10.9
22 PsiBlast_CBE 61.8633% -93 - C2 -1ZY4 3.5
56 HHSearch 61.1233% -90 - C2 -2W5A 4.9 NEK2_HUMAN
14 PsiBlast_PDB 61.0433% -87 - C2 -1ZY4 2.0 GCN2_YEAST
31 PsiBlast_CBE 60.5231% -87 - C2 -2XKD 7.0 NEK2_HUMAN
26 PsiBlast_CBE 60.4931% -80 - C2 -2XNO 7.2 NEK2_HUMAN
30 PsiBlast_CBE 60.4031% -89 - C2 -2XKE 6.6 NEK2_HUMAN
33 PsiBlast_CBE 60.3431% -85 - C2 -2XK8 7.3 NEK2_HUMAN
15 PsiBlast_PDB 60.2933% -87 - C2 -1ZY5 4.5 GCN2_YEAST
24 PsiBlast_CBE 60.1231% -73 - C2 -2W5B 5.0 NEK2_HUMAN
20 PsiBlast_PDB 60.0831% -89 - C2 -2JAV 6.7 NEK2_HUMAN
23 PsiBlast_CBE 60.0332% -90 - C2 -1ZYD 5.3
54 HHSearch 59.9434% -76 - C2 -1ZY4 2.0 GCN2_YEAST
29 PsiBlast_CBE 59.6231% -83 - C2 -2XKF 6.5 NEK2_HUMAN
35 PsiBlast_CBE 59.4231% -84 - C2 -2XK6 6.5 NEK2_HUMAN
17 PsiBlast_PDB 59.3632% -86 - C2 -1ZYD 5.3 GCN2_YEAST
38 PsiBlast_CBE 58.7731% -82 - C2 -2WQO 8.2 NEK2_HUMAN
37 PsiBlast_CBE 58.7331% -79 - C2 -2XK3 6.4 NEK2_HUMAN
27 PsiBlast_CBE 58.6031% -77 - C2 -2XNN 6.2 NEK2_HUMAN
25 PsiBlast_CBE 58.5731% -79 - C2 -2XNP 9.1 NEK2_HUMAN
32 PsiBlast_CBE 58.5431% -77 - C2 -2XKC 7.5 NEK2_HUMAN
34 PsiBlast_CBE 58.4231% -84 - C2 -2XK7 6.7 NEK2_HUMAN
36 PsiBlast_CBE 58.1631% -80 - C2 -2XK4 7.2 NEK2_HUMAN
28 PsiBlast_CBE 57.6831% -82 - C2 -2XNM 8.2 NEK2_HUMAN