@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : E2AK4_HUMAN: (2015-10-06 )
MAGGRGAPGRGRDEPPESYPQRQDHELQALEAIYGADFQDLRPDACGPVKEPPEINLVLYPQGLTGEEVYVKVDLRVKCPPTYPDVVPEIELKNAKGLSNESVNLLKSRLEELAKKHCGEVMIFELAYHVQSFLSEHNKPPPKSFHEEMLERRAQEEQQRLLEAKRKEEQEQREILHEIQRRKEEIKEEKKRKEMAKQERLEIASLSNQDHTSKKDPGGHRTAAILHGGSPDFVGNGKHRANSSGRSRRERQYSVCNSEDSPGSCEILYFNMGSPDQLMVHKGKCIGSDEQLGKLVYNALETATGGFVLLYEWVLQWQKKMGPFLTSQEKEKIDKCKKQIQGTETEFNSLVKLSHPNVVRYLAMNLKEQDDSIVVDILVEHISGVSLAAHLSHSGPIPVHQLRRYTAQLLSGLDYLHSNSVVHKVLSASNVLVDAEGTVKITDYSISKRLADICKEDVFEQTRVRFSDNALPYKTGKKGDVWRLGLLLLSLSQGQECGEYPVTIPSDLPADFQDFLKKCVCLDDKERWSPQQLLKHSFINPQPKMPLVEQSPEDSEGQDYVETVIPSNRLPSAAFFSETQRQFSRYFIEFEELQLLGKGAFGAVIKVQNKLDGCCYAVKRIPINPASRQFRRIKGEVTLLSRLHHENIVRYYNAWIERHERPAGPGTPPPDSGPLAKDDRAARGQPASDTDGLDSVEAAAPPPILSSSVEWSTSGERSASARFPATGPGSSDDEDDDEDEHGGVFSQSFLPASDSESDIIFDNEDENSKSQNQDEDCNEKNGCHESEPSVTTEAVHYLYIQMEYCEKSTLRDTIDQGLYRDTVRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFLDSDDHVKIGDFGLATDHLAFSADSKQDDQTGDLIKSDPSGHLTGMVGTALYVSPEVQGSTKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSPKFPEDFDDGEHAKQKSVISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLTNVDGKAYRTMMAQIFSQRISPAIDYTYDSDILKGNFSIRTAKMQQHVCETIIRIFKRHGAVQLCTPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRIPFARYVARNNILNLKRYCIERVFRPRKLDRFHPKELLECAFDIVTSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLLKAILLHCGIPEDKLSQVYIILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDLMPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLGIKLQVLINLGLVYKVQQHNGIIFQFVAFIKRRQRAVPEILAAGGRYDLLIPQFRGPQALGPVPTAIGVSIAIDKISAAVLNMEESVTISSCDLLVVSVGQMSMSRAINLTQKLWTAGITAEIMYDWSQSQEELQEYCRHHEITYVALVSDKEGSHVKVKSFEKERQTEKRVLETELVDHVLQKLRTKVTDERNGREASDNLAVQNLKGSFSNASGLFEIHGATVVPIVSVLAPEKLSASTRRRYETQVQTRLQTSLANLHQKSSEIEILAVDLPKETILQFLSLEWDADEQAFNTTVKQLLSRLPKQRYLKLVCDEIYNIKVEKKVSVLFLYSYRDDYYRILF

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3Z1_A_2(4X7J)

[Raw transfer]




3Z3_A_2(4X7K)

[Raw transfer]




3Z4_A_2(4X7L)

[Raw transfer]




ATP_A_3(5D9H)
?
[Raw transfer]




3Z5_A_2(4X7N)

[Raw transfer]




3Z2_A_2(4X7H)

[Raw transfer]




ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]




GOL_B_4(4FZA)
STK26_HUMAN
[Raw transfer]




GOL_A_4(4X7K)

[Raw transfer]




GOL_A_4(4X7L)

[Raw transfer]




GOL_B_3(4FZA)
STK26_HUMAN
[Raw transfer]




DKI_B_3(4FZF)
?
[Raw transfer]




ANP_C_10(2A19)
E2AK2_HUMAN
[Raw transfer]




3Z6_A_2(4X7O)

[Raw transfer]




J60_B_3(4NZW)
STK25_HUMAN
[Raw transfer]




ANP_C_9(3DAK)
OXSR1_HUMAN
[Raw transfer]




ANP_B_11(2VWI)
OXSR1_HUMAN
[Raw transfer]




ANP_B_7(3DAK)
OXSR1_HUMAN
[Raw transfer]




ANP_D_11(3DAK)
OXSR1_HUMAN
[Raw transfer]




ANP_A_5(3DAK)
OXSR1_HUMAN
[Raw transfer]




ANP_D_20(2VWI)
OXSR1_HUMAN
[Raw transfer]




6 PsiBlast_PDB 49.1836% -27 - C2 -4X7J 7.7
7 PsiBlast_PDB 47.8236% -25 - C2 -4X7K 8.7
11 PsiBlast_PDB 47.0636% -26 - C2 -4X7H 7.0
8 PsiBlast_PDB 46.9336% -26 - C2 -4X7L 8.0
9 PsiBlast_PDB 46.7136% -24 - C2 -4X7N 8.1
10 PsiBlast_PDB 45.9236% -33 - C2 -4X7O 7.8
13 PsiBlast_PDB 45.4934% -35 - C2 -2A19 4.0 E2AK2_HUMAN
22 PsiBlast_CBE 40.9433% -16 - C2 -2A19 3.7 E2AK2_HUMAN
78 PsiBlast_CBE 40.1331% -26 - C2 -4NZW 4.7 STK25_HUMAN
33 PsiBlast_CBE 36.9231% -29 - C2 -4FZF 5.3 ?
35 PsiBlast_CBE 36.1431% -23 - C2 -4FZA 2.3 STK26_HUMAN
32 PsiBlast_CBE 31.5733% -10 - C2 -3DAK 4.2 OXSR1_HUMAN
30 PsiBlast_CBE 31.3233% -3 - C2 -3DAK 4.7 OXSR1_HUMAN
31 PsiBlast_CBE 30.9033% -8 - C2 -3DAK 4.7 OXSR1_HUMAN
25 PsiBlast_CBE 29.7232% -10 - C2 -2VWI 4.1 OXSR1_HUMAN
29 PsiBlast_CBE 27.5533% -7 - C2 -3DAK 4.6 OXSR1_HUMAN
27 PsiBlast_CBE 26.0632% -5 - C2 -2VWI 4.4 OXSR1_HUMAN