@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EPHA3_HUMAN: (2015-10-07 )
MDCQLSILLLLSCSVLDSFGELIPQPSNEVNLLDSKTIQGELGWISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFTLRDCNSIPLVLGTCKETFNLYYMESDDDHGVKFREHQFTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDSQSLVEVRGSCVNNSKEEDPPRMYCSTEGEWLVPIGKCSCNAGYEERGFMCQACRPGFYKALDGNMKCAKCPPHSSTQEDGSMNCRCENNYFRADKDPPSMACTRPPSSPRNVISNINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNIKQCEPCSPNVRFLPRQFGLTNTTVTVTDLLAHTNYTFEIDAVNGVSELSSPPRQFAAVSITTNQAAPSPVLTIKKDRTSRNSISLSWQEPEHPNGIILDYEVKYYEKQEQETSYTILRARGTNVTISSLKPDTIYVFQIRARTAAGYGTNSRKFEFETSPDSFSISGESSQVVMIAISAAVAIILLTVVIYVLIGRFCGYKSKHGADEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVDITTFRTTGDWLNGVWTAHCKEIFTGVEYSSCDTIAKISTDDMKKVGVTVVGPQKKIISSIKALETQSKNGPVPV

Atome Classification :

(80 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AS6_A_2(2XVD)

[Raw transfer]




C07_A_2(4G2F)

[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




7X6_A_2(2VWZ)

[Raw transfer]




7X4_A_2(2VWX)

[Raw transfer]




L1G_A_3(2C0I)
HCK_HUMAN
[Raw transfer]




VRZ_B_8(3VRZ)
HCK_HUMAN
[Raw transfer]




ANP_A_4(2QO7)

[Raw transfer]




ADP_D_12(2HEN)

[Raw transfer]




L3G_A_3(2C0T)
HCK_HUMAN
[Raw transfer]




L2G_A_3(2C0O)
HCK_HUMAN
[Raw transfer]




STI_A_2(4CSV)
?
[Raw transfer]




7X5_A_2(2VWY)

[Raw transfer]




IFC_A_2(3DZQ)

[Raw transfer]




X9F_A_2(2X9F)

[Raw transfer]




7X8_A_2(2VX1)

[Raw transfer]




25Q_A_2(4P4C)

[Raw transfer]




L1G_B_5(2C0I)
HCK_HUMAN
[Raw transfer]




ANP_A_4(3FXX)

[Raw transfer]




1N1_A_2(2Y6O)

[Raw transfer]




GOL_A_3(2Y6M)

[Raw transfer]




B96_A_2(4TWN)

[Raw transfer]




ADP_C_11(2HEN)
EPHB2_MOUSE
[Raw transfer]




37W_A_2(4TWO)

[Raw transfer]




VRZ_A_5(3VRZ)
HCK_HUMAN
[Raw transfer]




ANP_A_3(2QOQ)

[Raw transfer]




IHZ_A_2(3DKO)

[Raw transfer]




ANP_A_3(2QO9)

[Raw transfer]




L3G_B_6(2C0T)
HCK_HUMAN
[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




ANP_B_2(2SRC)
SRC_HUMAN
[Raw transfer]




ADP_B_10(2HEN)
EPHB2_MOUSE
[Raw transfer]




ANP_A_2(4FL3)
KSYK_HUMAN
[Raw transfer]




VSA_A_5(3VS1)
HCK_HUMAN
[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




ANP_A_3(2OZO)
ZAP70_HUMAN
[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




Q9G_A_8(2XYU)

[Raw transfer]




32W_A_2(4BB4)

[Raw transfer]




VSA_B_8(3VS1)
HCK_HUMAN
[Raw transfer]




7X7_A_2(2VX0)

[Raw transfer]




VSG_A_3(3VS5)
HCK_HUMAN
[Raw transfer]




VSF_A_5(3VS4)
HCK_HUMAN
[Raw transfer]




VSE_B_10(4LUE)
HCK_HUMAN
[Raw transfer]




1BM_A_2(2HK5)
HCK_HUMAN
[Raw transfer]




L2G_B_5(2C0O)
HCK_HUMAN
[Raw transfer]




ADP_A_9(2HEN)
EPHB2_MOUSE
[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




VSF_B_8(3VS4)
HCK_HUMAN
[Raw transfer]




VS0_A_5(3VS0)
HCK_HUMAN
[Raw transfer]




VS0_B_8(3VS0)
HCK_HUMAN
[Raw transfer]




B43_A_3(3VRY)
HCK_HUMAN
[Raw transfer]




VSB_A_3(3VS2)
HCK_HUMAN
[Raw transfer]




VSG_B_6(3VS5)
HCK_HUMAN
[Raw transfer]




VSH_B_10(3VS6)
HCK_HUMAN
[Raw transfer]




STU_A_3(2YN8)
EPHB4_HUMAN
[Raw transfer]




VSH_A_6(3VS6)
HCK_HUMAN
[Raw transfer]




B43_B_7(3VRY)
HCK_HUMAN
[Raw transfer]




VSE_A_4(4LUE)
HCK_HUMAN
[Raw transfer]




VSE_B_7(3VS3)
HCK_HUMAN
[Raw transfer]




GOL_B_12(4LUD)
HCK_HUMAN
[Raw transfer]




KS1_B_6(3VS7)
HCK_HUMAN
[Raw transfer]




STU_A_3(3CBL)

[Raw transfer]




STU_B_4(2YN8)

[Raw transfer]




VSE_A_3(3VS3)
HCK_HUMAN
[Raw transfer]




GOL_A_6(4LUE)
HCK_HUMAN
[Raw transfer]




30K_A_2(4AW5)

[Raw transfer]




STU_A_2(1U59)

[Raw transfer]




VSB_B_7(3VS2)
HCK_HUMAN
[Raw transfer]




PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]




MPZ_G_7(1Y57)
SRC_HUMAN
[Raw transfer]




03P_A_5(3POZ)

[Raw transfer]




SK8_A_5(4LUD)
HCK_HUMAN
[Raw transfer]




H8H_A_2(2H8H)
SRC_HUMAN
[Raw transfer]




DB8_A_2(4OTW)

[Raw transfer]




SK8_B_8(4LUD)
HCK_HUMAN
[Raw transfer]




PP2_B_4(3GEQ)
SRC_CHICK
[Raw transfer]




RXT_B_4(4U5J)
SRC_CHICK
[Raw transfer]




ANP_D_4(1JPA)

[Raw transfer]




ACP_A_2(4UEU)
?
[Raw transfer]




ANP_C_3(1JPA)
EPHB2_MOUSE
[Raw transfer]




5 PsiBlast_PDB 84.8999%-112 - C3 -3FXX 4.6
11 PsiBlast_PDB 84.3599%-111 - C3 -2QOC 5.2
8 PsiBlast_PDB 83.6599%-110 - C3 -2QO7 4.9
9 PsiBlast_PDB 83.2499%-112 - C3 -2QOQ 4.3
13 PsiBlast_PDB 83.2399%-112 - C3 -4G2F 5.7
2 PsiBlast_PDB 83.1299%-112 - C3 -2QO9 4.3
12 PsiBlast_PDB 82.7799%-115 - C3 -3DZQ 10.7
19 PsiBlast_PDB 82.2299%-110 - C3 -4TWO 6.0
17 PsiBlast_PDB 81.7899%-113 - C3 -4P4C 6.0
18 PsiBlast_PDB 80.9699%-114 - C3 -4TWN 11.9
27 PsiBlast_CBE 79.0280%-105 - C3 -3DKO 8.3
45 PsiBlast_CBE 78.6073%-106 - C3 -2VX1 7.2
33 PsiBlast_CBE 78.5785%-114 - C3 -2XYU 6.9
49 PsiBlast_CBE 78.5173%-105 - C3 -2VWX 6.4
47 PsiBlast_CBE 78.3873%-102 - C3 -2VWZ 7.2
29 PsiBlast_CBE 78.3085%-113 - C3 -2Y6O 7.2
30 PsiBlast_CBE 78.2885%-109 - C3 -2Y6M 2.6
48 PsiBlast_CBE 78.1173%-104 - C3 -2VWY 6.7
46 PsiBlast_CBE 78.1173%-105 - C3 -2VX0 7.2
31 PsiBlast_CBE 77.3277%-107 - C3 -1JPA 4.1
44 PsiBlast_CBE 76.8973%-107 - C3 -2X9F 6.1
42 PsiBlast_CBE 76.8173%-110 - C3 -4BB4 6.5
32 PsiBlast_CBE 76.6077%-108 - C3 -1JPA 4.1 EPHB2_MOUSE
51 PsiBlast_CBE 75.8076%-108 - C3 -4AW5 7.3
40 PsiBlast_CBE 75.7379%-107 - C3 -2HEN 5.4 EPHB2_MOUSE
36 PsiBlast_CBE 75.6976%-112 - C3 -2YN8 8.5
52 PsiBlast_CBE 75.5272%-107 - C3 -1MQB 4.4
39 PsiBlast_CBE 75.3479%-105 - C3 -2HEN 4.9 EPHB2_MOUSE
41 PsiBlast_CBE 75.1079%-107 - C3 -2HEN 4.6 EPHB2_MOUSE
43 PsiBlast_CBE 74.7973%-103 - C3 -2XVD 6.8
37 PsiBlast_CBE 74.7276%-114 - C3 -2YN8 8.5 EPHB4_HUMAN
53 PsiBlast_CBE 73.0672%-106 - C3 -1MQB 4.1 EPHA2_HUMAN
132 HHSearch 72.8570%-106 - C3 -3KUL 2.9 EPHA8_HUMAN
35 PsiBlast_CBE 72.6969%-106 - C3 -3KUL 2.9 EPHA8_HUMAN
133 HHSearch 72.6870%-106 - C3 -1MQB 4.1 EPHA2_HUMAN
38 PsiBlast_CBE 70.4879%-106 - C3 -2HEN 5.6
144 HHSearch 65.9237% -99 * C3 *4FL3 5.9 KSYK_HUMAN
139 HHSearch 64.8241%-101 - C3 -2OZO 5.8 ZAP70_HUMAN
134 HHSearch 64.0342% -93 - C3 -3CBL 8.5
142 HHSearch 63.4440% -99 - C3 -1U59 8.6
78 PsiBlast_CBE 62.8242%-101 - C3 -4LUD 6.1 HCK_HUMAN
77 PsiBlast_CBE 61.6642%-104 - C3 -4LUE 9.3 HCK_HUMAN
87 PsiBlast_CBE 61.6542% -97 - C3 -3VS3 9.1 HCK_HUMAN
74 PsiBlast_CBE 61.4044% -98 - C3 -4CSV 10.2 ?
138 HHSearch 61.3944% -98 - C3 -1QCF 6.6 HCK_HUMAN
135 HHSearch 61.2638%-102 - C3 -3POZ 10.3
75 PsiBlast_CBE 61.1843% -95 - C3 -2HK5 8.2 HCK_HUMAN
95 PsiBlast_CBE 61.0642% -98 - C3 -3VRZ 9.3 HCK_HUMAN
76 PsiBlast_CBE 60.8942%-104 - C3 -4LUE 9.0 HCK_HUMAN
97 PsiBlast_CBE 60.8242% -97 - C3 -3VRY 8.4 HCK_HUMAN
83 PsiBlast_CBE 60.7042% -99 - C3 -3VS5 8.2 HCK_HUMAN
104 PsiBlast_CBE 60.6742% -98 - C3 -2C0I 10.7 HCK_HUMAN
81 PsiBlast_CBE 60.4442% -99 - C3 -3VS6 8.0 HCK_HUMAN
103 PsiBlast_CBE 60.3942% -97 - C3 -2C0I 10.5 HCK_HUMAN
102 PsiBlast_CBE 60.3742% -98 - C3 -2C0O 10.3 HCK_HUMAN
93 PsiBlast_CBE 60.3042% -98 - C3 -3VS0 7.9 HCK_HUMAN
90 PsiBlast_CBE 60.1242%-102 - C3 -3VS2 8.6 HCK_HUMAN
99 PsiBlast_CBE 59.9242% -96 - C3 -2C0T 9.9 HCK_HUMAN
143 HHSearch 59.8233% -97 - C3 -4OTW 6.9
79 PsiBlast_CBE 59.8042%-102 - C3 -4LUD 4.7 HCK_HUMAN
109 PsiBlast_CBE 59.7144% -86 - C3 -2H8H 7.3 SRC_HUMAN
73 PsiBlast_CBE 59.7044% -94 - C3 -4UEU 3.4 ?
88 PsiBlast_CBE 59.6542% -98 - C3 -3VS3 8.8 HCK_HUMAN
86 PsiBlast_CBE 59.6142% -97 - C3 -3VS4 8.4 HCK_HUMAN
100 PsiBlast_CBE 59.3742% -94 - C3 -2C0T 10.8 HCK_HUMAN
96 PsiBlast_CBE 59.2142% -98 - C3 -3VRZ 9.1 HCK_HUMAN
98 PsiBlast_CBE 59.0742% -96 - C3 -3VRY 8.5 HCK_HUMAN
84 PsiBlast_CBE 58.9642% -99 - C3 -3VS5 8.2 HCK_HUMAN
85 PsiBlast_CBE 58.8842% -97 - C3 -3VS4 8.3 HCK_HUMAN
92 PsiBlast_CBE 58.7942% -91 - C3 -3VS1 7.7 HCK_HUMAN
82 PsiBlast_CBE 58.6742%-100 - C3 -3VS6 8.3 HCK_HUMAN
101 PsiBlast_CBE 58.2542% -97 - C3 -2C0O 10.4 HCK_HUMAN
112 PsiBlast_CBE 57.7544% -88 - C3 -4U5J 5.4 SRC_CHICK
91 PsiBlast_CBE 57.7442%-100 - C3 -3VS1 8.5 HCK_HUMAN
89 PsiBlast_CBE 57.6942% -98 - C3 -3VS2 7.1 HCK_HUMAN
110 PsiBlast_CBE 57.5644% -85 - C3 -2SRC 5.2 SRC_HUMAN
80 PsiBlast_CBE 57.2542% -92 - C3 -3VS7 6.5 HCK_HUMAN
108 PsiBlast_CBE 56.8145% -86 - C3 -3GEQ 6.4 SRC_CHICK
111 PsiBlast_CBE 56.1044% -82 - C3 -1Y57 7.0 SRC_HUMAN
94 PsiBlast_CBE 55.1842% -92 - C3 -3VS0 8.5 HCK_HUMAN