@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EPHA5_HUMAN: (2015-10-07 )
MRGSGPRGAGRRRPPSGGGDTPITPASLAGCYSAPRRAPLWTCLLLCAALRTLLASPSNEVNLLDSRTVMGDLGWIAFPKNGWEEIGEVDENYAPIHTYQVCKVMEQNQNNWLLTSWISNEGASRIFIELKFTLRDCNSLPGGLGTCKETFNMYYFESDDQNGRNIKENQYIKIDTIAADESFTELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCPSVVRHLAVFPDTITGADSSQLLEVSGSCVNHSVTDEPPKMHCSAEGEWLVPIGKCMCKAGYEEKNGTCQVCRPGFFKASPHIQSCGKCPPHSYTHEEASTSCVCEKDYFRRESDPPTMACTRPPSAPRNAISNVNETSVFLEWIPPADTGGRKDVSYYIACKKCNSHAGVCEECGGHVRYLPRQSGLKNTSVMMVDLLAHTNYTFEIEAVNGVSDLSPGARQYVSVNVTTNQAAPSPVTNVKKGKIAKNSISLSWQEPDRPNGIILEYEIKYFEKDQETSYTIIKSKETTITAEGLKPASVYVFQIRARTAAGYGVFSRRFEFETTPVFAASSDQSQIPVIAVSVTVGVILLAVVIGVLLSGSCCECGCGRASSLCAVAHPSLIWRCGYSKAKQDPEEEKMHFHNGHIKLPGVRTYIDPHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRNPSSLKTLVNASCRVSNLLAEHSPLGSGAYRSVGEWLEAIKMGRYTEIFMENGYSSMDAVAQVTLEDLRRLGVTLVGHQKKIMNSLQEMKVQLVNGMVPL

Atome Classification :

(77 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AS6_A_2(2XVD)

[Raw transfer]




C07_A_2(4G2F)

[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




7X6_A_2(2VWZ)

[Raw transfer]




X9F_A_2(2X9F)

[Raw transfer]




7X4_A_2(2VWX)

[Raw transfer]




L1G_A_3(2C0I)
HCK_HUMAN
[Raw transfer]




STI_A_2(4CSV)
?
[Raw transfer]




1N1_A_2(2Y6O)

[Raw transfer]




VRZ_B_8(3VRZ)
HCK_HUMAN
[Raw transfer]




7X8_A_2(2VX1)

[Raw transfer]




ANP_A_4(2QO7)

[Raw transfer]




ADP_D_12(2HEN)

[Raw transfer]




L1G_B_5(2C0I)
HCK_HUMAN
[Raw transfer]




GOL_A_3(2Y6M)

[Raw transfer]




Q9G_A_8(2XYU)

[Raw transfer]




ADP_C_11(2HEN)
EPHB2_MOUSE
[Raw transfer]




7X5_A_2(2VWY)

[Raw transfer]




IHZ_A_2(3DKO)

[Raw transfer]




L3G_A_3(2C0T)
HCK_HUMAN
[Raw transfer]




ADP_B_10(2HEN)
EPHB2_MOUSE
[Raw transfer]




IFC_A_2(3DZQ)

[Raw transfer]




L3G_B_6(2C0T)
HCK_HUMAN
[Raw transfer]




B96_A_2(4TWN)

[Raw transfer]




7X7_A_2(2VX0)

[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




37W_A_2(4TWO)

[Raw transfer]




L2G_A_3(2C0O)
HCK_HUMAN
[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




ANP_A_3(2QO9)

[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




VRZ_A_5(3VRZ)
HCK_HUMAN
[Raw transfer]




32W_A_2(4BB4)

[Raw transfer]




ANP_A_3(2OZO)
ZAP70_HUMAN
[Raw transfer]




1BM_A_2(2HK5)
HCK_HUMAN
[Raw transfer]




VSA_A_5(3VS1)
HCK_HUMAN
[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




ANP_A_4(3FXX)

[Raw transfer]




ADP_A_9(2HEN)
EPHB2_MOUSE
[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




ANP_A_3(2QOQ)

[Raw transfer]




25Q_A_2(4P4C)

[Raw transfer]




VSE_B_10(4LUE)
HCK_HUMAN
[Raw transfer]




VSA_B_8(3VS1)
HCK_HUMAN
[Raw transfer]




L2G_B_5(2C0O)
HCK_HUMAN
[Raw transfer]




VSF_B_8(3VS4)
HCK_HUMAN
[Raw transfer]




GOL_B_12(4LUD)
HCK_HUMAN
[Raw transfer]




VSF_A_5(3VS4)
HCK_HUMAN
[Raw transfer]




VSE_A_4(4LUE)
HCK_HUMAN
[Raw transfer]




VSG_B_6(3VS5)
HCK_HUMAN
[Raw transfer]




VSG_A_3(3VS5)
HCK_HUMAN
[Raw transfer]




VS0_A_5(3VS0)
HCK_HUMAN
[Raw transfer]




VSB_A_3(3VS2)
HCK_HUMAN
[Raw transfer]




VSH_A_6(3VS6)
HCK_HUMAN
[Raw transfer]




KS1_B_6(3VS7)
HCK_HUMAN
[Raw transfer]




GOL_A_6(4LUE)
HCK_HUMAN
[Raw transfer]




VSH_B_10(3VS6)
HCK_HUMAN
[Raw transfer]




B43_B_7(3VRY)
HCK_HUMAN
[Raw transfer]




B43_A_3(3VRY)
HCK_HUMAN
[Raw transfer]




STU_A_2(1U59)

[Raw transfer]




VSE_B_7(3VS3)
HCK_HUMAN
[Raw transfer]




VS0_B_8(3VS0)
HCK_HUMAN
[Raw transfer]




VSE_A_3(3VS3)
HCK_HUMAN
[Raw transfer]




STU_A_3(2YN8)
EPHB4_HUMAN
[Raw transfer]




STU_B_4(2YN8)

[Raw transfer]




VSB_B_7(3VS2)
HCK_HUMAN
[Raw transfer]




30K_A_2(4AW5)

[Raw transfer]




STU_A_3(3CBL)

[Raw transfer]




SK8_B_8(4LUD)
HCK_HUMAN
[Raw transfer]




PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]




03P_A_5(3POZ)

[Raw transfer]




DB8_A_2(4OTW)

[Raw transfer]




ANP_D_4(1JPA)

[Raw transfer]




STU_X_2(3A4O)
LYN_HUMAN
[Raw transfer]




SK8_A_5(4LUD)
HCK_HUMAN
[Raw transfer]




ANP_C_3(1JPA)
EPHB2_MOUSE
[Raw transfer]




4KA_A_3(4KAB)
FAK1_HUMAN
[Raw transfer]




ACP_A_2(4UEU)
?
[Raw transfer]




4KA_B_4(4KAB)

[Raw transfer]




9 PsiBlast_PDB 78.1277%-107 - C3 -3FXX 4.3
33 PsiBlast_CBE 77.9788%-114 - C3 -2Y6O 7.6
15 PsiBlast_PDB 77.8577%-109 - C3 -2QOQ 4.3
19 PsiBlast_PDB 77.6878%-111 - C3 -3DZQ 10.8
8 PsiBlast_PDB 77.6877%-108 - C3 -2QO9 4.1
34 PsiBlast_CBE 77.5988%-110 - C3 -2Y6M 2.6
37 PsiBlast_CBE 77.4088%-114 - C3 -2XYU 7.1
20 PsiBlast_PDB 77.4078%-109 - C3 -4G2F 5.7
14 PsiBlast_PDB 76.9577%-107 - C3 -2QO7 4.7
26 PsiBlast_CBE 76.7878%-109 - C3 -4P4C 6.1
52 PsiBlast_CBE 76.6075%-104 - C3 -2VX1 7.3
18 PsiBlast_PDB 76.5278%-106 - C3 -2QOC 5.2
54 PsiBlast_CBE 76.1175%-100 - C3 -2VWZ 7.5
56 PsiBlast_CBE 76.0875%-103 - C3 -2VWX 6.4
51 PsiBlast_CBE 75.9275%-104 - C3 -2X9F 6.3
55 PsiBlast_CBE 75.8275%-102 - C3 -2VWY 6.7
35 PsiBlast_CBE 75.8179%-108 - C3 -1JPA 4.2
53 PsiBlast_CBE 75.5975%-103 - C3 -2VX0 7.4
25 PsiBlast_CBE 75.4378%-110 - C3 -4TWN 12.0
48 PsiBlast_CBE 75.2675%-108 - C3 -4BB4 6.6
24 PsiBlast_CBE 74.8278%-106 - C3 -4TWO 5.4
41 PsiBlast_CBE 74.8081%-104 - C3 -2HEN 5.0 EPHB2_MOUSE
31 PsiBlast_CBE 74.5781%-105 - C3 -3DKO 8.4
43 PsiBlast_CBE 74.3981%-105 - C3 -2HEN 4.7 EPHB2_MOUSE
36 PsiBlast_CBE 74.3779%-106 - C3 -1JPA 4.1 EPHB2_MOUSE
40 PsiBlast_CBE 73.6481%-104 - C3 -2HEN 5.6
42 PsiBlast_CBE 73.3481%-105 - C3 -2HEN 5.5 EPHB2_MOUSE
57 PsiBlast_CBE 73.3375%-106 - C3 -4AW5 7.5
44 PsiBlast_CBE 73.1674%-108 - C3 -1MQB 4.5
50 PsiBlast_CBE 72.7975%-102 - C3 -2XVD 7.0
46 PsiBlast_CBE 72.6675%-110 - C3 -2YN8 8.9
47 PsiBlast_CBE 71.9675%-111 - C3 -2YN8 8.5 EPHB4_HUMAN
131 HHSearch 71.7974%-104 - C3 -3KUL 2.9 EPHA8_HUMAN
39 PsiBlast_CBE 71.2871%-104 - C3 -3KUL 2.9 EPHA8_HUMAN
45 PsiBlast_CBE 70.3374%-105 - C3 -1MQB 4.0 EPHA2_HUMAN
133 HHSearch 69.7871%-105 - C3 -1MQB 4.0 EPHA2_HUMAN
144 HHSearch 63.1141%-104 - C3 -2OZO 5.6 ZAP70_HUMAN
139 HHSearch 62.1544% -98 - C3 -1QCF 6.6 HCK_HUMAN
81 PsiBlast_CBE 61.6143%-101 - C3 -4LUD 6.2 HCK_HUMAN
112 PsiBlast_CBE 60.9643%-102 - C3 -4KAB 3.0 FAK1_HUMAN
134 HHSearch 60.7241% -95 - C3 -3CBL 8.6
143 HHSearch 60.3240%-101 - C3 -1U59 5.8
78 PsiBlast_CBE 59.9045% -97 - C3 -4CSV 10.1 ?
140 HHSearch 59.5333% -93 - C3 -4OTW 6.6
135 HHSearch 59.4436%-100 - C3 -3POZ 10.6
102 PsiBlast_CBE 59.3743% -96 - C3 -2C0T 9.8 HCK_HUMAN
98 PsiBlast_CBE 59.2843% -97 - C3 -3VRZ 9.5 HCK_HUMAN
100 PsiBlast_CBE 59.1843% -97 - C3 -3VRY 8.5 HCK_HUMAN
111 PsiBlast_CBE 59.1243% -97 - C3 -4KAB 2.8
86 PsiBlast_CBE 59.0743% -98 - C3 -3VS5 8.6 HCK_HUMAN
109 PsiBlast_CBE 59.0443% -94 - C3 -2HK5 8.4 HCK_HUMAN
90 PsiBlast_CBE 58.9843% -97 - C3 -3VS3 9.4 HCK_HUMAN
80 PsiBlast_CBE 58.8443%-104 - C3 -4LUE 9.6 HCK_HUMAN
93 PsiBlast_CBE 58.1343%-100 - C3 -3VS2 8.6 HCK_HUMAN
96 PsiBlast_CBE 57.9643% -96 - C3 -3VS0 8.0 HCK_HUMAN
84 PsiBlast_CBE 57.9243% -98 - C3 -3VS6 8.1 HCK_HUMAN
107 PsiBlast_CBE 57.8843% -95 - C3 -2C0I 10.8 HCK_HUMAN
99 PsiBlast_CBE 57.7643% -95 - C3 -3VRZ 9.3 HCK_HUMAN
91 PsiBlast_CBE 57.6943% -98 - C3 -3VS3 9.0 HCK_HUMAN
103 PsiBlast_CBE 57.6743% -92 - C3 -2C0T 10.8 HCK_HUMAN
82 PsiBlast_CBE 57.6143%-100 - C3 -4LUD 4.8 HCK_HUMAN
79 PsiBlast_CBE 57.5443%-104 - C3 -4LUE 8.9 HCK_HUMAN
101 PsiBlast_CBE 57.5243% -96 - C3 -3VRY 8.6 HCK_HUMAN
106 PsiBlast_CBE 57.4443% -95 - C3 -2C0I 10.7 HCK_HUMAN
89 PsiBlast_CBE 57.4443% -96 - C3 -3VS4 8.6 HCK_HUMAN
87 PsiBlast_CBE 57.3943% -99 - C3 -3VS5 8.4 HCK_HUMAN
105 PsiBlast_CBE 57.1043% -96 - C3 -2C0O 10.4 HCK_HUMAN
77 PsiBlast_CBE 56.9745% -92 - C3 -4UEU 3.5 ?
88 PsiBlast_CBE 56.8943% -96 - C3 -3VS4 8.4 HCK_HUMAN
85 PsiBlast_CBE 56.8943%-100 - C3 -3VS6 8.1 HCK_HUMAN
95 PsiBlast_CBE 56.8443% -90 - C3 -3VS1 7.8 HCK_HUMAN
94 PsiBlast_CBE 56.8243%-100 - C3 -3VS1 8.7 HCK_HUMAN
92 PsiBlast_CBE 56.6043% -98 - C3 -3VS2 7.2 HCK_HUMAN
104 PsiBlast_CBE 56.5743% -97 - C3 -2C0O 10.6 HCK_HUMAN
83 PsiBlast_CBE 55.5243% -93 - C3 -3VS7 6.7 HCK_HUMAN
110 PsiBlast_CBE 53.2044% -87 - C3 -3A4O 7.1 LYN_HUMAN
97 PsiBlast_CBE 51.6743% -90 - C3 -3VS0 8.6 HCK_HUMAN