@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EPHA8_HUMAN: (2015-10-07 )
MAPARGRLPPALWVVTAAAAAATCVSAARGEVNLLDTSTIHGDWGWLTYPAHGWDSINEVDESFQPIHTYQVCNVMSPNQNNWLRTSWVPRDGARRVYAEIKFTLRDCNSMPGVLGTCKETFNLYYLESDRDLGASTQESQFLKIDTIAADESFTGADLGVRRLKLNTEVRSVGPLSKRGFYLAFQDIGACLAILSLRIYYKKCPAMVRNLAAFSEAVTGADSSSLVEVRGQCVRHSEERDTPKMYCSAEGEWLVPIGKCVCSAGYEERRDACVACELGFYKSAPGDQLCARCPPHSHSAAPAAQACHCDLSYYRAALDPPSSACTRPPSAPVNLISSVNGTSVTLEWAPPLDPGGRSDITYNAVCRRCPWALSRCEACGSGTRFVPQQTSLVQASLLVANLLAHMNYSFWIEAVNGVSDLSPEPRRAAVVNITTNQAAPSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPRPRYDTRTIVWICLTLITGLVVLLLLLICKKRHCGYSKAFQDSDEEKMHYQNGQAPPPVFLPLHHPPGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATATVSRCPPPAFVRSCFDLRGGSGGGGGLTVGDWLDSIRMGRYRDHFAAGGYSSLGMVLRMNAQDVRALGITLMGHQKKILGSIQTMRAQLTSTQGPRRHL

Atome Classification :

(69 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AS6_A_2(2XVD)

[Raw transfer]



1N1_A_2(2Y6O)

[Raw transfer]



GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]



7X6_A_2(2VWZ)

[Raw transfer]



GOL_A_3(2Y6M)

[Raw transfer]



7X4_A_2(2VWX)

[Raw transfer]



C07_A_2(4G2F)

[Raw transfer]



STI_A_2(4CSV)
?
[Raw transfer]



X9F_A_2(2X9F)

[Raw transfer]



7X8_A_2(2VX1)

[Raw transfer]



ANP_D_4(1MQB)

[Raw transfer]



32W_A_2(4BB4)

[Raw transfer]



7X5_A_2(2VWY)

[Raw transfer]



B96_A_2(4TWN)

[Raw transfer]



Q9G_A_8(2XYU)

[Raw transfer]



ATP_A_4(2IJM)
FAK1_HUMAN
[Raw transfer]



IFC_A_2(3DZQ)

[Raw transfer]



IHZ_A_2(3DKO)

[Raw transfer]



ANP_A_4(2QO7)

[Raw transfer]



ADP_D_12(2HEN)

[Raw transfer]



7X7_A_2(2VX0)

[Raw transfer]



ADP_B_10(2HEN)
EPHB2_MOUSE
[Raw transfer]



ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]



37W_A_2(4TWO)

[Raw transfer]



25Q_A_2(4P4C)

[Raw transfer]



ADP_C_11(2HEN)
EPHB2_MOUSE
[Raw transfer]



ANP_A_3(2QOQ)

[Raw transfer]



ANP_A_5(2QOC)

[Raw transfer]



ADP_A_9(2HEN)
EPHB2_MOUSE
[Raw transfer]



KAO_B_5(4KAO)

[Raw transfer]



ADP_B_2(1MP8)

[Raw transfer]



ANP_A_4(3FXX)

[Raw transfer]



1BQ_A_2(4I4E)

[Raw transfer]



STU_A_3(2YN8)
EPHB4_HUMAN
[Raw transfer]



K9Y_A_2(4K9Y)

[Raw transfer]



ANP_A_3(2QO9)

[Raw transfer]



STU_B_4(2YN8)

[Raw transfer]



10N_A_3(4GU6)
FAK1_HUMAN
[Raw transfer]



30K_A_2(4AW5)

[Raw transfer]



7PY_C_3(2ETM)
FAK1_HUMAN
[Raw transfer]



10N_B_4(4GU6)

[Raw transfer]



PXK_A_3(3PXK)
FAK1_HUMAN
[Raw transfer]



ADP_B_3(2IJM)

[Raw transfer]



7PY_D_4(2ETM)

[Raw transfer]



4ST_A_2(2J0J)
FAK1_CHICK
[Raw transfer]



4GU_A_3(4GU9)
FAK1_HUMAN
[Raw transfer]



KAO_A_3(4KAO)
FAK1_HUMAN
[Raw transfer]



4GU_B_4(4GU9)

[Raw transfer]



4ST_B_3(2J0M)
?
[Raw transfer]



YAM_A_2(3BZ3)

[Raw transfer]



BII_A_2(2JKM)

[Raw transfer]



STU_B_2(1BYG)
CSK_HUMAN
[Raw transfer]



BI9_B_6(4D58)
?
[Raw transfer]



4KA_A_3(4KAB)
FAK1_HUMAN
[Raw transfer]



ANP_D_4(1JPA)

[Raw transfer]



ACP_A_2(4UEU)
?
[Raw transfer]



PXK_B_5(3PXK)

[Raw transfer]



30G_A_2(4Q9S)

[Raw transfer]



K8A_A_3(4K8A)
FAK1_HUMAN
[Raw transfer]



9RM_A_3(4D5H)
FAK1_CHICK
[Raw transfer]



ANP_C_3(1JPA)
EPHB2_MOUSE
[Raw transfer]



1BR_A_3(4I4F)

[Raw transfer]



K8A_B_4(4K8A)

[Raw transfer]



4KA_B_4(4KAB)

[Raw transfer]



VG8_A_2(2JKQ)

[Raw transfer]



0PF_A_2(4EBW)

[Raw transfer]



KB8_B_10(4D4V)

[Raw transfer]



0O7_A_2(4EBV)

[Raw transfer]



IPA_A_3(4EBV)

[Raw transfer]



DMS_B_6(4D4V)

[Raw transfer]
1 PsiBlast_PDB 83.15100%-112 - C3 -3KUL 3.1 EPHA8_HUMAN
33 PsiBlast_CBE 79.3673%-117 - C3 -2Y6O 5.0
34 PsiBlast_CBE 79.2273%-113 - C3 -2Y6M 2.7
24 PsiBlast_CBE 78.5562%-113 - C3 -2QOC 5.3
35 PsiBlast_CBE 78.5074%-117 - C3 -2XYU 7.4
12 PsiBlast_PDB 78.1758%-110 - C3 -3FXX 4.7
49 PsiBlast_CBE 77.3366%-108 - C3 -2X9F 6.3
32 PsiBlast_CBE 77.3262%-118 - C3 -3DZQ 10.6
31 PsiBlast_CBE 77.2962%-113 - C3 -4G2F 6.0
9 PsiBlast_PDB 77.1959%-111 - C3 -2QO9 4.6
48 PsiBlast_CBE 76.9166%-110 - C3 -2XVD 7.0
19 PsiBlast_PDB 76.8071%-104 - C3 -3DKO 8.4
47 PsiBlast_CBE 76.6366%-113 - C3 -4BB4 6.7
26 PsiBlast_CBE 76.3162%-114 - C3 -4TWN 12.0
53 PsiBlast_CBE 76.1466%-106 - C3 -2VWY 6.7
27 PsiBlast_CBE 76.0762%-115 - C3 -4P4C 6.1
50 PsiBlast_CBE 75.9366%-108 - C3 -2VX1 7.3
15 PsiBlast_PDB 75.8858%-108 - C3 -2QO7 5.0
52 PsiBlast_CBE 75.6866%-103 - C3 -2VWZ 7.5
54 PsiBlast_CBE 75.6166%-106 - C3 -2VWX 6.4
51 PsiBlast_CBE 75.6066%-106 - C3 -2VX0 7.3
55 PsiBlast_CBE 75.4868%-109 - C3 -4AW5 7.5
16 PsiBlast_PDB 75.4858%-110 - C3 -2QOQ 4.4
42 PsiBlast_CBE 75.2069%-107 - C3 -2HEN 5.1 EPHB2_MOUSE
43 PsiBlast_CBE 74.9169%-110 - C3 -2HEN 5.5 EPHB2_MOUSE
37 PsiBlast_CBE 74.8966%-107 - C3 -1JPA 4.2
25 PsiBlast_CBE 74.7062%-112 - C3 -4TWO 4.8
56 PsiBlast_CBE 74.5364%-109 - C3 -1MQB 4.5
44 PsiBlast_CBE 74.2269%-110 - C3 -2HEN 5.0 EPHB2_MOUSE
45 PsiBlast_CBE 74.0067%-111 - C3 -2YN8 8.9
38 PsiBlast_CBE 73.9166%-106 - C3 -1JPA 4.1 EPHB2_MOUSE
41 PsiBlast_CBE 73.7169%-110 - C3 -2HEN 5.6
46 PsiBlast_CBE 72.9667%-113 - C3 -2YN8 8.5 EPHB4_HUMAN
57 PsiBlast_CBE 71.6764%-107 - C3 -1MQB 4.0 EPHA2_HUMAN
94 PsiBlast_CBE 64.4941% -96 - C3 -4K8A 4.3
103 PsiBlast_CBE 63.4641%-100 - C3 -4I4E 5.7
117 PsiBlast_CBE 63.3641%-102 - C3 -4D4V - FAK1_CHICK
85 PsiBlast_CBE 63.1541%-101 * C3 *2IJM 4.8
97 PsiBlast_CBE 62.9341%-104 - C3 -4GU9 5.5 FAK1_HUMAN
89 PsiBlast_CBE 62.9041%-101 - C3 -4EBW 6.1
104 PsiBlast_CBE 62.8842%-102 - C3 -2JKM 7.0
90 PsiBlast_CBE 62.8641% -96 - C3 -4EBV 5.4
86 PsiBlast_CBE 62.7241% -99 - C3 -2IJM 4.9 FAK1_HUMAN
111 PsiBlast_CBE 62.6641%-104 - C3 -4D58 6.3 ?
96 PsiBlast_CBE 62.6641% -98 - C3 -4GU9 5.4
95 PsiBlast_CBE 62.6441%-102 - C3 -4K8A 4.2 FAK1_HUMAN
84 PsiBlast_CBE 62.6441%-100 - C3 -3PXK 4.7 FAK1_HUMAN
78 PsiBlast_CBE 62.5744%-103 - C3 -4CSV 10.3 ?
105 PsiBlast_CBE 62.3741% -96 - C3 -1MP8 6.1
100 PsiBlast_CBE 62.3242%-109 - C3 -2J0M 8.0 ?
98 PsiBlast_CBE 62.2141% -99 - C3 -3BZ3 6.0
102 PsiBlast_CBE 62.0941%-101 - C3 -4I4F 7.4
106 PsiBlast_CBE 62.0841% -97 - C3 -2J0J 8.3 FAK1_CHICK
116 PsiBlast_CBE 62.0441%-105 - C3 -4D4V 4.3
99 PsiBlast_CBE 62.0142% -98 - C3 -2JKQ 5.3
83 PsiBlast_CBE 61.9941% -97 - C3 -3PXK 5.3
87 PsiBlast_CBE 61.9041% -97 - C3 -2ETM 5.3
110 PsiBlast_CBE 61.6841%-102 - C3 -4D5H 5.3 FAK1_CHICK
101 PsiBlast_CBE 61.5541% -97 - C3 -4Q9S 5.1
79 PsiBlast_CBE 61.5441% -99 - C3 -4KAO 8.4
91 PsiBlast_CBE 61.3541% -99 - C3 -4KAB 2.8
81 PsiBlast_CBE 61.1741% -98 - C3 -4GU6 6.8
80 PsiBlast_CBE 61.1041%-100 - C3 -4KAO 8.4 FAK1_HUMAN
88 PsiBlast_CBE 60.7841% -97 - C3 -2ETM 5.4 FAK1_HUMAN
92 PsiBlast_CBE 60.7641%-103 - C3 -4KAB 3.0 FAK1_HUMAN
93 PsiBlast_CBE 60.1841% -93 - C3 -4K9Y 10.5
82 PsiBlast_CBE 59.9241% -92 - C3 -4GU6 5.8 FAK1_HUMAN
119 Fugue 59.6042%-100 - C3 -1BYG 8.1 CSK_HUMAN
77 PsiBlast_CBE 59.4344% -96 - C3 -4UEU 3.9 ?