@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EPHB1_HUMAN: (2015-10-07 )
MALDYLLLLLLASAVAAMEETLMDTRTATAELGWTANPASGWEEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNVPGSCKETFNLYYYETDSVIATKKSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEVRSFGPLTRNGFYLAFQDYGACMSLLSVRVFFKKCPSIVQNFAVFPETMTGAESTSLVIARGTCIPNAEEVDVPIKLYCNGDGEWMVPIGRCTCKPGYEPENSVACKACPAGTFKASQEAEGCSHCPSNSRSPAEASPICTCRTGYYRADFDPPEVACTSVPSGPRNVISIVNETSIILEWHPPRETGGRDDVTYNIICKKCRADRRSCSRCDDNVEFVPRQLGLTECRVSISSLWAHTPYTFDIQAINGVSSKSPFPPQHVSVNITTNQAAPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDDDYKSELREQLPLIAGSAAAGVVFVVSLVAISIVCSRKRAYSKEAVYSDKLQHYSTGRGSPGMKIYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPMDCPAALHQLMLDCWQKDRNSRPRFAEIVNTLDKMIRNPASLKTVATITAVPSQPLLDRSIPDFTAFTTVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGITLAGHQKKILNSIHSMRVQISQSPTAMA

Atome Classification :

(72 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AS6_A_2(2XVD)

[Raw transfer]




7X6_A_2(2VWZ)

[Raw transfer]




C07_A_2(4G2F)

[Raw transfer]




STI_A_3(3MS9)
ABL1_MOUSE
[Raw transfer]




7X5_A_2(2VWY)

[Raw transfer]




STI_B_7(3K5V)
ABL1_MOUSE
[Raw transfer]




X9F_A_2(2X9F)

[Raw transfer]




7X8_A_2(2VX1)

[Raw transfer]




7X4_A_2(2VWX)

[Raw transfer]




PRC_D_4(1FPU)
ABL1_MOUSE
[Raw transfer]




STI_B_9(3MS9)
ABL1_MOUSE
[Raw transfer]




STI_A_9(1IEP)
ABL1_MOUSE
[Raw transfer]




STI_A_7(1OPJ)
ABL1_MOUSE
[Raw transfer]




STI_A_4(3K5V)
ABL1_MOUSE
[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




STI_B_8(1OPJ)
ABL1_MOUSE
[Raw transfer]




32W_A_2(4BB4)

[Raw transfer]




ATP_A_4(2IJM)
FAK1_HUMAN
[Raw transfer]




STI_B_10(1IEP)
ABL1_MOUSE
[Raw transfer]




7X7_A_2(2VX0)

[Raw transfer]




GOL_A_3(2Y6M)

[Raw transfer]




Q9G_A_8(2XYU)

[Raw transfer]




STI_A_2(4CSV)
?
[Raw transfer]




IHZ_A_2(3DKO)

[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




IFC_A_2(3DZQ)

[Raw transfer]




ANP_A_4(2QO7)

[Raw transfer]




ADP_D_12(2HEN)

[Raw transfer]




1N1_A_2(2Y6O)

[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




B96_A_2(4TWN)

[Raw transfer]




ADP_C_11(2HEN)
EPHB2_MOUSE
[Raw transfer]




STU_A_3(2YN8)
EPHB4_HUMAN
[Raw transfer]




KIN_A_2(2HZN)
ABL1_MOUSE
[Raw transfer]




KAO_B_5(4KAO)

[Raw transfer]




ADP_B_10(2HEN)
EPHB2_MOUSE
[Raw transfer]




PRC_C_3(1FPU)
ABL1_MOUSE
[Raw transfer]




ANP_A_4(3FXX)

[Raw transfer]




STU_B_4(2YN8)

[Raw transfer]




ADP_A_9(2HEN)
EPHB2_MOUSE
[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




30K_A_2(4AW5)

[Raw transfer]




K9Y_A_2(4K9Y)

[Raw transfer]




ANP_A_3(2QOQ)

[Raw transfer]




ANP_A_3(2QO9)

[Raw transfer]




25Q_A_2(4P4C)

[Raw transfer]




10N_A_3(4GU6)
FAK1_HUMAN
[Raw transfer]




37W_A_2(4TWO)

[Raw transfer]




ADP_B_3(2IJM)

[Raw transfer]




P17_A_5(1M52)
ABL1_MOUSE
[Raw transfer]




10N_B_4(4GU6)

[Raw transfer]




P17_B_6(1M52)
ABL1_MOUSE
[Raw transfer]




1N1_B_3(4XEY)
ABL1_HUMAN
[Raw transfer]




PXK_A_3(3PXK)
FAK1_HUMAN
[Raw transfer]




STU_A_5(3CD3)

[Raw transfer]




KAO_A_3(4KAO)
FAK1_HUMAN
[Raw transfer]




7PY_C_3(2ETM)
FAK1_HUMAN
[Raw transfer]




4GU_A_3(4GU9)
FAK1_HUMAN
[Raw transfer]




4GU_B_4(4GU9)

[Raw transfer]




1N1_A_4(4XEY)
ABL1_HUMAN
[Raw transfer]




4KA_A_3(4KAB)
FAK1_HUMAN
[Raw transfer]




7PY_D_4(2ETM)

[Raw transfer]




ANP_D_4(1JPA)

[Raw transfer]




ANP_C_3(1JPA)
EPHB2_MOUSE
[Raw transfer]




PXK_B_5(3PXK)

[Raw transfer]




ACP_A_2(4UEU)
?
[Raw transfer]




K8A_A_3(4K8A)
FAK1_HUMAN
[Raw transfer]




VG8_A_2(2JKQ)

[Raw transfer]




4KA_B_4(4KAB)

[Raw transfer]




K8A_B_4(4K8A)

[Raw transfer]




0O7_A_2(4EBV)

[Raw transfer]




0PF_A_2(4EBW)

[Raw transfer]




IPA_A_3(4EBV)

[Raw transfer]




21 PsiBlast_CBE 78.0987%-110 - C1 -1JPA 4.2
18 PsiBlast_PDB 77.9285%-113 - C1 -4BB4 6.8
11 PsiBlast_PDB 77.9085%-109 - C1 -2VWX 6.4
15 PsiBlast_PDB 77.8585%-111 - C1 -2VX1 7.3
16 PsiBlast_PDB 77.5985%-110 - C1 -2X9F 6.6
13 PsiBlast_PDB 77.4285%-106 - C1 -2VWZ 7.6
2 PsiBlast_PDB 77.3187%-109 - C1 -1JPA 4.1 EPHB2_MOUSE
12 PsiBlast_PDB 77.2285%-107 - C1 -2VWY 6.9
14 PsiBlast_PDB 77.1585%-108 - C1 -2VX0 7.3
17 PsiBlast_PDB 76.3885%-108 - C1 -2XVD 6.9
52 PsiBlast_CBE 76.2981%-113 - C1 -2Y6M 2.6
51 PsiBlast_CBE 75.9781%-116 - C1 -2Y6O 7.4
37 PsiBlast_CBE 75.7486%-110 - C1 -4AW5 7.5
53 PsiBlast_CBE 75.4880%-118 - C1 -2XYU 7.0
32 PsiBlast_CBE 75.3587%-108 - C1 -2HEN 5.0 EPHB2_MOUSE
48 PsiBlast_CBE 75.1179%-108 - C1 -3DKO 8.4
27 PsiBlast_CBE 75.0987%-115 - C1 -2YN8 8.4
34 PsiBlast_CBE 75.0787%-110 - C1 -2HEN 4.8 EPHB2_MOUSE
31 PsiBlast_CBE 75.0287%-110 - C1 -2HEN 5.6
26 PsiBlast_CBE 74.8568%-108 - C1 -3FXX 4.0
33 PsiBlast_CBE 74.3787%-109 - C1 -2HEN 5.3 EPHB2_MOUSE
28 PsiBlast_CBE 73.7787%-116 - C1 -2YN8 8.4 EPHB4_HUMAN
35 PsiBlast_CBE 73.6168%-107 - C1 -2QOQ 4.3
36 PsiBlast_CBE 72.8568%-107 - C1 -2QO7 4.7
20 PsiBlast_PDB 72.5868%-109 - C1 -2QO9 3.9
46 PsiBlast_CBE 72.5769%-112 - C1 -3DZQ 10.7
38 PsiBlast_CBE 72.4869%-110 - C1 -2QOC 4.5
45 PsiBlast_CBE 72.4169%-109 - C1 -4G2F 5.7
40 PsiBlast_CBE 71.9069%-111 - C1 -4TWN 12.0
39 PsiBlast_CBE 71.1069%-106 - C1 -4TWO 6.1
41 PsiBlast_CBE 70.8069%-109 - C1 -4P4C 6.1
54 PsiBlast_CBE 70.1767%-109 - C1 -3KUL 3.0 EPHA8_HUMAN
55 PsiBlast_CBE 69.9571%-110 - C1 -1MQB 4.2
56 PsiBlast_CBE 68.7471%-109 - C1 -1MQB 4.3 EPHA2_HUMAN
105 PsiBlast_CBE 59.0241% -97 - C1 -1M52 8.9 ABL1_MOUSE
83 PsiBlast_CBE 57.8742%-101 - C1 -4EBV 5.5
76 PsiBlast_CBE 57.8541% -99 - C1 -4XEY 7.4 ABL1_HUMAN
95 PsiBlast_CBE 57.6942%-102 - C1 -3PXK 5.3
97 PsiBlast_CBE 57.6041% -98 - C1 -3MS9 11.7 ABL1_MOUSE
92 PsiBlast_CBE 57.2242%-103 - C1 -4GU9 5.6 FAK1_HUMAN
104 PsiBlast_CBE 57.1741% -97 - C1 -1M52 9.3 ABL1_MOUSE
100 PsiBlast_CBE 57.0441% -98 - C1 -3K5V 11.6 ABL1_MOUSE
103 PsiBlast_CBE 57.0241% -96 - C1 -1OPJ 11.3 ABL1_MOUSE
102 PsiBlast_CBE 56.9341%-100 - C1 -1OPJ 11.5 ABL1_MOUSE
79 PsiBlast_CBE 56.6242%-100 - C1 -2IJM 5.2 FAK1_HUMAN
108 PsiBlast_CBE 56.4741% -93 - C1 -1FPU 7.3 ABL1_MOUSE
77 PsiBlast_CBE 56.3541%-100 - C1 -4XEY 7.7 ABL1_HUMAN
93 PsiBlast_CBE 56.2842%-100 - C1 -4GU6 5.6
89 PsiBlast_CBE 56.2742% -95 - C1 -4K8A 4.3
96 PsiBlast_CBE 56.2342%-104 - C1 -3PXK 4.8 FAK1_HUMAN
99 PsiBlast_CBE 55.9741%-100 - C1 -3K5V 11.6 ABL1_MOUSE
82 PsiBlast_CBE 55.8742%-102 - C1 -4EBW 6.1
87 PsiBlast_CBE 55.6942%-104 - C1 -4KAB 3.0 FAK1_HUMAN
107 PsiBlast_CBE 55.6541% -94 - C1 -1IEP 11.4 ABL1_MOUSE
98 PsiBlast_CBE 55.6141% -95 - C1 -3MS9 11.6 ABL1_MOUSE
80 PsiBlast_CBE 55.4542% -98 - C1 -2ETM 6.3
110 PsiBlast_CBE 55.3942% -98 * C1 *2JKQ 5.7
65 PsiBlast_CBE 55.3745%-102 - C1 -4CSV 10.3 ?
81 PsiBlast_CBE 55.3642% -98 - C1 -2ETM 5.4 FAK1_HUMAN
90 PsiBlast_CBE 55.2742%-100 - C1 -4K8A 4.2 FAK1_HUMAN
86 PsiBlast_CBE 55.2242%-100 - C1 -4KAB 2.8
94 PsiBlast_CBE 55.1142% -93 - C1 -4GU6 6.5 FAK1_HUMAN
106 PsiBlast_CBE 55.0041% -93 - C1 -1IEP 11.4 ABL1_MOUSE
84 PsiBlast_CBE 54.7642%-102 - C1 -4KAO 8.4
91 PsiBlast_CBE 54.5942% -97 - C1 -4GU9 5.5
88 PsiBlast_CBE 54.5642% -92 - C1 -4K9Y 10.8
78 PsiBlast_CBE 54.5342%-100 - C1 -2IJM 4.8
109 PsiBlast_CBE 53.7841% -94 - C1 -1FPU 9.2 ABL1_MOUSE
85 PsiBlast_CBE 53.5842%-102 - C1 -4KAO 8.4 FAK1_HUMAN
64 PsiBlast_CBE 52.8945% -94 - C1 -4UEU 3.6 ?
101 PsiBlast_CBE 52.5641% -93 - C1 -2HZN 6.7 ABL1_MOUSE
113 Fugue 51.9733% -74 - C1 -3CD3 8.8