@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EPHB2_HUMAN: (2015-10-07 )
MALRRLGAALLLLPLLAAVEETLMDSTTATAELGWMVHPPSGWEEVSGYDENMNTIRTYQVCNVFESSQNNWLRTKFIRRRGAHRIHVEMKFSVRDCSSIPSVPGSCKETFNLYYYEADFDSATKTFPNWMENPWVKVDTIAADESFSQVDLGGRVMKINTEVRSFGPVSRSGFYLAFQDYGGCMSLIAVRVFYRKCPRIIQNGAIFQETLSGAESTSLVAARGSCIANAEEVDVPIKLYCNGDGEWLVPIGRCMCKAGFEAVENGTVCRGCPSGTFKANQGDEACTHCPINSRTTSEGATNCVCRNGYYRADLDPLDMPCTTIPSAPQAVISSVNETSLMLEWTPPRDSGGREDLVYNIICKSCGSGRGACTRCGDNVQYAPRQLGLTEPRIYISDLLAHTQYTFEIQAVNGVTDQSPFSPQFASVNITTNQAAPSAVSIMHQVSRTVDSITLSWSQPDQPNGVILDYELQYYEKELSEYNATAIKSPTNTVTVQGLKAGAIYVFQVRARTVAGYGRYSGKMYFQTMTEAEYQTSIQEKLPLIIGSSAAGLVFLIAVVVIAIVCNRRGFERADSEYTDKLQHYTSGHMTPGMKIYIDPFTYEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLSSGINLPLLDRTIPDYTSFNTVDEWLEAIKMGQYKESFANAGFTSFDVVSQMMMEDILRVGVTLAGHQKKILNSIQVMRAQMNQIQSVEGQPLARRPRATGRTKRCQPRDVTKKTCNSNDGKKKGMGKKKTDPGRGREIQGIFFKEDSHKESNDCSCGG

Atome Classification :

(70 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AS6_A_2(2XVD)

[Raw transfer]




7X6_A_2(2VWZ)

[Raw transfer]




7X4_A_2(2VWX)

[Raw transfer]




7X8_A_2(2VX1)

[Raw transfer]




7X5_A_2(2VWY)

[Raw transfer]




32W_A_2(4BB4)

[Raw transfer]




X9F_A_2(2X9F)

[Raw transfer]




L1G_A_3(2C0I)
HCK_HUMAN
[Raw transfer]




C07_A_2(4G2F)

[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




7X7_A_2(2VX0)

[Raw transfer]




L3G_A_3(2C0T)
HCK_HUMAN
[Raw transfer]




GOL_A_3(2Y6M)

[Raw transfer]




ANP_A_4(2QO7)

[Raw transfer]




STI_A_2(4CSV)
?
[Raw transfer]




1N1_A_2(2Y6O)

[Raw transfer]




ADP_C_11(2HEN)
EPHB2_MOUSE
[Raw transfer]




Q9G_A_8(2XYU)

[Raw transfer]




ADP_D_12(2HEN)

[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




IFC_A_2(3DZQ)

[Raw transfer]




VRZ_B_8(3VRZ)
HCK_HUMAN
[Raw transfer]




1BM_A_2(2HK5)
HCK_HUMAN
[Raw transfer]




L2G_A_3(2C0O)
HCK_HUMAN
[Raw transfer]




VSA_A_5(3VS1)
HCK_HUMAN
[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




ADP_B_10(2HEN)
EPHB2_MOUSE
[Raw transfer]




B96_A_2(4TWN)

[Raw transfer]




IHZ_A_2(3DKO)

[Raw transfer]




VRZ_A_5(3VRZ)
HCK_HUMAN
[Raw transfer]




L3G_B_6(2C0T)
HCK_HUMAN
[Raw transfer]




L1G_B_5(2C0I)
HCK_HUMAN
[Raw transfer]




ADP_A_9(2HEN)
EPHB2_MOUSE
[Raw transfer]




VSF_B_8(3VS4)
HCK_HUMAN
[Raw transfer]




STU_B_4(2YN8)

[Raw transfer]




STU_A_3(2YN8)
EPHB4_HUMAN
[Raw transfer]




ANP_A_4(3FXX)

[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




VSA_B_8(3VS1)
HCK_HUMAN
[Raw transfer]




ANP_A_3(2QO9)

[Raw transfer]




ANP_A_3(2QOQ)

[Raw transfer]




37W_A_2(4TWO)

[Raw transfer]




25Q_A_2(4P4C)

[Raw transfer]




30K_A_2(4AW5)

[Raw transfer]




VSF_A_5(3VS4)
HCK_HUMAN
[Raw transfer]




VSE_B_10(4LUE)
HCK_HUMAN
[Raw transfer]




VSH_A_6(3VS6)
HCK_HUMAN
[Raw transfer]




VSE_A_4(4LUE)
HCK_HUMAN
[Raw transfer]




B43_A_3(3VRY)
HCK_HUMAN
[Raw transfer]




VSE_B_7(3VS3)
HCK_HUMAN
[Raw transfer]




GOL_A_6(4LUE)
HCK_HUMAN
[Raw transfer]




L2G_B_5(2C0O)
HCK_HUMAN
[Raw transfer]




VS0_A_5(3VS0)
HCK_HUMAN
[Raw transfer]




KS1_B_6(3VS7)
HCK_HUMAN
[Raw transfer]




B43_B_7(3VRY)
HCK_HUMAN
[Raw transfer]




VSH_B_10(3VS6)
HCK_HUMAN
[Raw transfer]




VSG_A_3(3VS5)
HCK_HUMAN
[Raw transfer]




VSB_A_3(3VS2)
HCK_HUMAN
[Raw transfer]




VSE_A_3(3VS3)
HCK_HUMAN
[Raw transfer]




STU_A_5(3CD3)

[Raw transfer]




VS0_B_8(3VS0)
HCK_HUMAN
[Raw transfer]




VSG_B_6(3VS5)
HCK_HUMAN
[Raw transfer]




VSB_B_7(3VS2)
HCK_HUMAN
[Raw transfer]




SK8_B_8(4LUD)
HCK_HUMAN
[Raw transfer]




H8H_A_2(2H8H)
SRC_HUMAN
[Raw transfer]




SK8_A_5(4LUD)
HCK_HUMAN
[Raw transfer]




PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]




ANP_D_4(1JPA)

[Raw transfer]




ANP_C_3(1JPA)
EPHB2_MOUSE
[Raw transfer]




PP2_B_4(3GEQ)
SRC_CHICK
[Raw transfer]




GOL_B_13(4LUE)
HCK_HUMAN
[Raw transfer]




ACP_A_2(4UEU)
?
[Raw transfer]




21 PsiBlast_CBE 83.1899%-111 - C3 -1JPA 4.2
1 PsiBlast_PDB 82.7599%-111 - C3 -1JPA 4.1 EPHB2_MOUSE
3 PsiBlast_PDB 81.4299%-112 - C3 -2HEN 4.7 EPHB2_MOUSE
24 PsiBlast_CBE 81.1599%-111 - C3 -2HEN 5.5 EPHB2_MOUSE
23 PsiBlast_CBE 81.0699%-108 - C3 -2HEN 5.1 EPHB2_MOUSE
22 PsiBlast_CBE 81.0199%-111 - C3 -2HEN 5.7
30 PsiBlast_CBE 80.1182%-111 - C3 -2X9F 6.6
54 PsiBlast_CBE 80.0983%-119 - C3 -2XYU 7.0
41 PsiBlast_CBE 79.9383%-114 - C3 -2Y6M 2.6
31 PsiBlast_CBE 79.7982%-111 - C3 -2VX1 7.3
28 PsiBlast_CBE 79.5382%-115 - C3 -4BB4 6.7
34 PsiBlast_CBE 79.5182%-108 - C3 -2VWY 6.8
33 PsiBlast_CBE 79.4982%-106 - C3 -2VWZ 7.5
40 PsiBlast_CBE 79.3483%-117 - C3 -2Y6O 7.4
42 PsiBlast_CBE 79.1684%-113 - C3 -4AW5 7.6
35 PsiBlast_CBE 79.1382%-108 - C3 -2VWX 6.3
32 PsiBlast_CBE 78.8182%-109 - C3 -2VX0 7.4
29 PsiBlast_CBE 78.6582%-109 - C3 -2XVD 7.1
14 PsiBlast_PDB 78.0569%-109 - C3 -3FXX 4.4
36 PsiBlast_CBE 77.9884%-117 - C3 -2YN8 8.7
38 PsiBlast_CBE 77.9582%-107 - C3 -3DKO 8.4
19 PsiBlast_PDB 77.4569%-108 - C3 -2QOQ 4.1
18 PsiBlast_PDB 77.1769%-108 - C3 -2QO7 4.8
43 PsiBlast_CBE 76.9070%-111 - C3 -2QOC 5.2
50 PsiBlast_CBE 76.4670%-111 - C3 -4G2F 5.7
37 PsiBlast_CBE 76.3584%-117 - C3 -2YN8 8.6 EPHB4_HUMAN
13 PsiBlast_PDB 76.2969%-110 - C3 -2QO9 4.5
46 PsiBlast_CBE 76.2270%-112 - C3 -4P4C 6.2
51 PsiBlast_CBE 76.2170%-115 - C3 -3DZQ 10.7
45 PsiBlast_CBE 75.5370%-113 - C3 -4TWN 12.0
44 PsiBlast_CBE 75.3470%-109 - C3 -4TWO 6.0
56 PsiBlast_CBE 74.7569%-110 - C3 -1MQB 4.5
57 PsiBlast_CBE 74.0269%-110 - C3 -1MQB 4.2 EPHA2_HUMAN
55 PsiBlast_CBE 71.8067%-109 - C3 -3KUL 3.0 EPHA8_HUMAN
119 Fugue 63.3832% -89 - C3 -3CD3 8.8
83 PsiBlast_CBE 62.5841% -98 - C3 -4LUD 6.2 HCK_HUMAN
66 PsiBlast_CBE 61.9745%-103 - C3 -4CSV 10.3 ?
100 PsiBlast_CBE 60.1241% -96 - C3 -3VRZ 9.4 HCK_HUMAN
82 PsiBlast_CBE 60.0941%-100 - C3 -4LUE 9.4 HCK_HUMAN
95 PsiBlast_CBE 59.7741% -99 - C3 -3VS2 8.8 HCK_HUMAN
92 PsiBlast_CBE 59.7241% -95 - C3 -3VS3 9.3 HCK_HUMAN
65 PsiBlast_CBE 59.6945% -95 - C3 -4UEU 3.6 ?
110 PsiBlast_CBE 59.6841% -92 - C3 -1QCF 6.5 HCK_HUMAN
104 PsiBlast_CBE 59.6741% -95 - C3 -2C0T 9.7 HCK_HUMAN
107 PsiBlast_CBE 59.5541% -96 - C3 -2C0O 10.6 HCK_HUMAN
108 PsiBlast_CBE 59.3341% -94 - C3 -2C0I 10.9 HCK_HUMAN
101 PsiBlast_CBE 59.2641% -95 - C3 -3VRZ 9.4 HCK_HUMAN
109 PsiBlast_CBE 59.2541% -94 - C3 -2C0I 11.0 HCK_HUMAN
88 PsiBlast_CBE 59.1941% -95 - C3 -3VS5 8.5 HCK_HUMAN
98 PsiBlast_CBE 59.0641% -92 - C3 -3VS0 7.9 HCK_HUMAN
105 PsiBlast_CBE 59.0441% -91 - C3 -2C0T 10.8 HCK_HUMAN
97 PsiBlast_CBE 59.0141% -88 - C3 -3VS1 8.0 HCK_HUMAN
103 PsiBlast_CBE 58.8841% -91 - C3 -3VRY 8.7 HCK_HUMAN
114 PsiBlast_CBE 58.8444% -93 - C3 -2HK5 8.4 HCK_HUMAN
89 PsiBlast_CBE 58.7041% -96 - C3 -3VS5 8.4 HCK_HUMAN
87 PsiBlast_CBE 58.6741% -97 - C3 -3VS6 8.2 HCK_HUMAN
91 PsiBlast_CBE 58.6041% -93 - C3 -3VS4 8.5 HCK_HUMAN
86 PsiBlast_CBE 58.5341% -95 - C3 -3VS6 8.1 HCK_HUMAN
84 PsiBlast_CBE 58.3041% -99 - C3 -4LUD 4.8 HCK_HUMAN
102 PsiBlast_CBE 58.2541% -95 - C3 -3VRY 8.5 HCK_HUMAN
90 PsiBlast_CBE 58.2341% -92 - C3 -3VS4 8.4 HCK_HUMAN
106 PsiBlast_CBE 58.0841% -96 - C3 -2C0O 10.5 HCK_HUMAN
116 PsiBlast_CBE 57.7345% -90 - C3 -2H8H 7.3 SRC_HUMAN
81 PsiBlast_CBE 57.6841%-101 - C3 -4LUE 8.9 HCK_HUMAN
93 PsiBlast_CBE 57.4341% -95 - C3 -3VS3 8.9 HCK_HUMAN
96 PsiBlast_CBE 57.2841% -97 - C3 -3VS1 8.7 HCK_HUMAN
94 PsiBlast_CBE 56.9441% -94 - C3 -3VS2 7.2 HCK_HUMAN
85 PsiBlast_CBE 56.8441% -93 - C3 -3VS7 6.6 HCK_HUMAN
99 PsiBlast_CBE 55.7541% -89 - C3 -3VS0 8.5 HCK_HUMAN
113 PsiBlast_CBE 55.6946% -84 * C3 *3GEQ 6.1 SRC_CHICK