@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EPHB3_HUMAN: (2015-10-07 )
MARARPPPPPSPPPGLLPLLPPLLLLPLLLLPAGCRALEETLMDTKWVTSELAWTSHPESGWEEVSGYDEAMNPIRTYQVCNVRESSQNNWLRTGFIWRRDVQRVYVELKFTVRDCNSIPNIPGSCKETFNLFYYEADSDVASASSPFWMENPYVKVDTIAPDESFSRLDAGRVNTKVRSFGPLSKAGFYLAFQDQGACMSLISVRAFYKKCASTTAGFALFPETLTGAEPTSLVIAPGTCIPNAVEVSVPLKLYCNGDGEWMVPVGACTCATGHEPAAKESQCRPCPPGSYKAKQGEGPCLPCPPNSRTTSPAASICTCHNNFYRADSDSADSACTTVPSPPRGVISNVNETSLILEWSEPRDLGGRDDLLYNVICKKCHGAGGASACSRCDDNVEFVPRQLGLTERRVHISHLLAHTRYTFEVQAVNGVSGKSPLPPRYAAVNITTNQAAPSEVPTLRLHSSSGSSLTLSWAPPERPNGVILDYEMKYFEKSEGIASTVTSQMNSVQLDGLRPDARYVVQVRARTVAGYGQYSRPAEFETTSERGSGAQQLQEQLPLIVGSATAGLVFVVAVVVIAIVCLRKQRHGSDSEYTEKLQQYIAPGMKVYIDPFTYEDPNEAVREFAKEIDVSCVKIEEVIGAGEFGEVCRGRLKQPGRREVFVAIKTLKVGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMILTEFMENCALDSFLRLNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDPSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAVEQDYRLPPPMDCPTALHQLMLDCWVRDRNLRPKFSQIVNTLDKLIRNAASLKVIASAQSGMSQPLLDRTVPDYTTFTTVGDWLDAIKMGRYKESFVSAGFASFDLVAQMTAEDLLRIGVTLAGHQKKILSSIQDMRLQMNQTLPVQV

Atome Classification :

(73 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

7X6_A_2(2VWZ)

[Raw transfer]




AS6_A_2(2XVD)

[Raw transfer]




C07_A_2(4G2F)

[Raw transfer]




L1G_A_3(2C0I)
HCK_HUMAN
[Raw transfer]




L3G_A_3(2C0T)
HCK_HUMAN
[Raw transfer]




7X8_A_2(2VX1)

[Raw transfer]




7X5_A_2(2VWY)

[Raw transfer]




32W_A_2(4BB4)

[Raw transfer]




VRZ_B_8(3VRZ)
HCK_HUMAN
[Raw transfer]




7X4_A_2(2VWX)

[Raw transfer]




X9F_A_2(2X9F)

[Raw transfer]




GOL_A_3(2Y6M)

[Raw transfer]




L2G_A_3(2C0O)
HCK_HUMAN
[Raw transfer]




STI_A_2(4CSV)
?
[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




7X7_A_2(2VX0)

[Raw transfer]




L1G_B_5(2C0I)
HCK_HUMAN
[Raw transfer]




VSA_A_5(3VS1)
HCK_HUMAN
[Raw transfer]




Q9G_A_8(2XYU)

[Raw transfer]




ATP_A_4(2IJM)
FAK1_HUMAN
[Raw transfer]




IHZ_A_2(3DKO)

[Raw transfer]




L3G_B_6(2C0T)
HCK_HUMAN
[Raw transfer]




1BM_A_2(2HK5)
HCK_HUMAN
[Raw transfer]




VRZ_A_5(3VRZ)
HCK_HUMAN
[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




VSF_A_5(3VS4)
HCK_HUMAN
[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




VSA_B_8(3VS1)
HCK_HUMAN
[Raw transfer]




VSF_B_8(3VS4)
HCK_HUMAN
[Raw transfer]




1N1_A_2(2Y6O)

[Raw transfer]




ANP_A_4(2QO7)

[Raw transfer]




IFC_A_2(3DZQ)

[Raw transfer]




B96_A_2(4TWN)

[Raw transfer]




ADP_C_11(2HEN)
EPHB2_MOUSE
[Raw transfer]




B43_B_7(3VRY)
HCK_HUMAN
[Raw transfer]




VSE_B_10(4LUE)
HCK_HUMAN
[Raw transfer]




STU_A_3(2YN8)
EPHB4_HUMAN
[Raw transfer]




VSH_A_6(3VS6)
HCK_HUMAN
[Raw transfer]




30K_A_2(4AW5)

[Raw transfer]




VSE_A_3(3VS3)
HCK_HUMAN
[Raw transfer]




KS1_B_6(3VS7)
HCK_HUMAN
[Raw transfer]




ADP_A_9(2HEN)
EPHB2_MOUSE
[Raw transfer]




ADP_D_12(2HEN)

[Raw transfer]




ADP_B_10(2HEN)
EPHB2_MOUSE
[Raw transfer]




STU_B_4(2YN8)

[Raw transfer]




B43_A_3(3VRY)
HCK_HUMAN
[Raw transfer]




VSE_A_4(4LUE)
HCK_HUMAN
[Raw transfer]




VSE_B_7(3VS3)
HCK_HUMAN
[Raw transfer]




VS0_A_5(3VS0)
HCK_HUMAN
[Raw transfer]




L2G_B_5(2C0O)
HCK_HUMAN
[Raw transfer]




25Q_A_2(4P4C)

[Raw transfer]




ANP_A_3(2QO9)

[Raw transfer]




GOL_B_12(4LUD)
HCK_HUMAN
[Raw transfer]




GOL_A_6(4LUE)
HCK_HUMAN
[Raw transfer]




VS0_B_8(3VS0)
HCK_HUMAN
[Raw transfer]




ANP_A_4(3FXX)

[Raw transfer]




VSB_A_3(3VS2)
HCK_HUMAN
[Raw transfer]




VSH_B_10(3VS6)
HCK_HUMAN
[Raw transfer]




VSG_B_6(3VS5)
HCK_HUMAN
[Raw transfer]




VSG_A_3(3VS5)
HCK_HUMAN
[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




37W_A_2(4TWO)

[Raw transfer]




VSB_B_7(3VS2)
HCK_HUMAN
[Raw transfer]




ANP_A_3(2QOQ)

[Raw transfer]




PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]




STU_A_5(3CD3)

[Raw transfer]




ADP_B_3(2IJM)

[Raw transfer]




ANP_D_4(1JPA)

[Raw transfer]




SK8_B_8(4LUD)
HCK_HUMAN
[Raw transfer]




SK8_A_5(4LUD)
HCK_HUMAN
[Raw transfer]




PP2_B_4(3GEQ)
SRC_CHICK
[Raw transfer]




ANP_C_3(1JPA)
EPHB2_MOUSE
[Raw transfer]




ACP_A_2(4UEU)
?
[Raw transfer]




0PF_A_2(4EBW)

[Raw transfer]




0O7_A_2(4EBV)

[Raw transfer]




IPA_A_3(4EBV)

[Raw transfer]




21 PsiBlast_CBE 82.7886%-117 - C2 -1JPA 4.2
20 PsiBlast_PDB 81.5885%-118 - C2 -2X9F 6.6
19 PsiBlast_PDB 81.5585%-117 - C2 -2VX1 7.1
22 PsiBlast_CBE 81.3085%-120 - C2 -4BB4 6.9
15 PsiBlast_PDB 81.0985%-115 - C2 -2VWX 6.4
2 PsiBlast_PDB 80.8686%-115 - C2 -1JPA 4.1 EPHB2_MOUSE
17 PsiBlast_PDB 80.5085%-111 - C2 -2VWZ 7.5
16 PsiBlast_PDB 80.4685%-113 - C2 -2VWY 6.6
34 PsiBlast_CBE 80.2086%-116 - C2 -2HEN 4.6 EPHB2_MOUSE
23 PsiBlast_CBE 79.9185%-115 - C2 -2XVD 6.8
18 PsiBlast_PDB 79.7385%-115 - C2 -2VX0 7.3
44 PsiBlast_CBE 79.4786%-117 - C2 -4AW5 7.3
49 PsiBlast_CBE 78.9581%-118 - C2 -2Y6M 2.6
33 PsiBlast_CBE 78.8886%-115 - C2 -2HEN 5.4 EPHB2_MOUSE
24 PsiBlast_CBE 78.7687%-124 - C2 -2YN8 8.2
32 PsiBlast_CBE 78.6286%-112 - C2 -2HEN 5.1 EPHB2_MOUSE
25 PsiBlast_CBE 78.6087%-126 - C2 -2YN8 8.5 EPHB4_HUMAN
48 PsiBlast_CBE 78.5181%-121 - C2 -2Y6O 7.6
31 PsiBlast_CBE 78.3386%-115 - C2 -2HEN 5.7
5 PsiBlast_PDB 78.1972%-111 - C2 -3FXX 4.1
12 PsiBlast_PDB 77.7972%-112 - C2 -2QOQ 4.3
51 PsiBlast_CBE 77.3481%-125 - C2 -2XYU 7.1
46 PsiBlast_CBE 77.3279%-110 - C2 -3DKO 8.4
35 PsiBlast_CBE 76.6972%-113 - C2 -2QOC 4.6
8 PsiBlast_PDB 76.6772%-113 - C2 -2QO9 4.0
11 PsiBlast_PDB 76.6072%-112 - C2 -2QO7 4.7
43 PsiBlast_CBE 76.3072%-116 - C2 -3DZQ 10.7
37 PsiBlast_CBE 75.7472%-116 - C2 -4TWN 12.0
42 PsiBlast_CBE 75.0872%-113 - C2 -4G2F 5.8
52 PsiBlast_CBE 74.7369%-113 - C2 -3KUL 2.8 EPHA8_HUMAN
36 PsiBlast_CBE 74.5672%-111 - C2 -4TWO 6.1
53 PsiBlast_CBE 74.2971%-114 - C2 -1MQB 4.2
38 PsiBlast_CBE 74.2672%-114 - C2 -4P4C 6.1
54 PsiBlast_CBE 73.7371%-114 - C2 -1MQB 4.3 EPHA2_HUMAN
107 PsiBlast_CBE 63.3741%-107 - C2 -4EBV 5.5
109 PsiBlast_CBE 62.2941%-106 - C2 -2IJM 5.0 FAK1_HUMAN
63 PsiBlast_CBE 61.2743%-110 - C2 -4CSV 10.3 ?
106 PsiBlast_CBE 61.2641%-106 - C2 -4EBW 6.1
77 PsiBlast_CBE 60.9741%-112 - C2 -4LUD 6.4 HCK_HUMAN
108 PsiBlast_CBE 60.6041%-107 - C2 -2IJM 4.9
111 Fugue 60.3635% -93 - C2 -3CD3 8.9
76 PsiBlast_CBE 60.3341%-112 - C2 -4LUE 9.5 HCK_HUMAN
86 PsiBlast_CBE 59.9441%-105 - C2 -3VS3 9.4 HCK_HUMAN
74 PsiBlast_CBE 59.7342%-101 - C2 -2HK5 8.3 HCK_HUMAN
82 PsiBlast_CBE 59.3841%-107 - C2 -3VS5 8.7 HCK_HUMAN
92 PsiBlast_CBE 58.7441%-106 - C2 -3VS0 8.2 HCK_HUMAN
87 PsiBlast_CBE 58.7241%-106 - C2 -3VS3 9.2 HCK_HUMAN
80 PsiBlast_CBE 58.6141%-107 - C2 -3VS6 8.2 HCK_HUMAN
62 PsiBlast_CBE 58.5443%-103 - C2 -4UEU 3.5 ?
96 PsiBlast_CBE 58.5241%-104 - C2 -3VRY 8.7 HCK_HUMAN
78 PsiBlast_CBE 58.4941%-112 - C2 -4LUD 4.9 HCK_HUMAN
84 PsiBlast_CBE 58.3441%-106 - C2 -3VS4 8.5 HCK_HUMAN
98 PsiBlast_CBE 58.0241%-103 - C2 -2C0T 9.9 HCK_HUMAN
85 PsiBlast_CBE 57.9541%-105 - C2 -3VS4 8.7 HCK_HUMAN
94 PsiBlast_CBE 57.9241%-106 - C2 -3VRZ 9.7 HCK_HUMAN
97 PsiBlast_CBE 57.9141%-105 - C2 -3VRY 9.0 HCK_HUMAN
81 PsiBlast_CBE 57.8241%-109 - C2 -3VS6 8.5 HCK_HUMAN
103 PsiBlast_CBE 57.6241%-105 - C2 -2C0I 11.2 HCK_HUMAN
104 PsiBlast_CBE 57.5241%-101 - C2 -1QCF 6.6 HCK_HUMAN
89 PsiBlast_CBE 57.3241%-108 - C2 -3VS2 8.7 HCK_HUMAN
75 PsiBlast_CBE 57.1941%-112 - C2 -4LUE 9.0 HCK_HUMAN
95 PsiBlast_CBE 57.0841%-105 - C2 -3VRZ 9.4 HCK_HUMAN
99 PsiBlast_CBE 56.8641%-102 - C2 -2C0T 10.9 HCK_HUMAN
101 PsiBlast_CBE 56.8341%-106 - C2 -2C0O 10.9 HCK_HUMAN
83 PsiBlast_CBE 56.8341%-106 - C2 -3VS5 8.4 HCK_HUMAN
105 PsiBlast_CBE 56.6545% -96 * C2 *3GEQ 6.1 SRC_CHICK
102 PsiBlast_CBE 56.6441%-104 - C2 -2C0I 11.1 HCK_HUMAN
91 PsiBlast_CBE 56.0341% -99 - C2 -3VS1 8.1 HCK_HUMAN
88 PsiBlast_CBE 55.8641%-107 - C2 -3VS2 7.4 HCK_HUMAN
100 PsiBlast_CBE 55.6441%-104 - C2 -2C0O 10.8 HCK_HUMAN
79 PsiBlast_CBE 55.3141%-103 - C2 -3VS7 6.8 HCK_HUMAN
90 PsiBlast_CBE 55.0941%-110 - C2 -3VS1 8.8 HCK_HUMAN
93 PsiBlast_CBE 53.9041%-102 - C2 -3VS0 8.7 HCK_HUMAN