@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : HUNK_HUMAN: (2015-10-08 )
MPAAAGDGLLGEPAAPGGGGGAEDAARPAAACEGSFLPAWVSGVPRERLRDFQHHKRVGNYLIGSRKLGEGSFAKVREGLHVLTGEKVAIKVIDKKRAKKDTYVTKNLRREGQIQQMIRHPNITQLLDILETENSYYLVMELCPGGNLMHKIYEKKRLEESEARRYIRQLISAVEHLHRAGVVHRDLKIENLLLDEDNNIKLIDFGLSNCAGILGYSDPFSTQCGSPAYAAPELLARKKYGPKIDVWSIGVNMYAMLTGTLPFTVEPFSLRALYQKMVDKEMNPLPTQLSTGAISFLRSLLEPDPVKRPNIQQALANRWLNENYTGKVPCNVTYPNRISLEDLSPSVVLHMTEKLGYKNSDVINTVLSNRACHILAIYFLLNKKLERYLSGKSDIQDSLCYKTRLYQIEKYRAPKESYEASLDTWTRDLEFHAVQDKKPKEQEKRGDFLHRPFSKKLDKNLPSHKQPSGSLMTQIQNTKALLKDRKASKSSFPDKDSFGCRNIFRKTSDSNCVASSSMEFIPVPPPRTPRIVKKPEPHQPGPGSTGIPHKEDPLMLDMVRSFESVDRDDHVEVLSPSHHYRILNSPVSLARRNSSERTLSPGLPSGSMSPLHTPLHPTLVSFAHEDKNSPPKEEGLCCPPPVPSNGPMQPLGSPNCVKSRGRFPMMGIGQMLRKRHQSLQPSADRPLEASLPPLQPLAPVNLAFDMADGVKTQC

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




M54_A_2(2R0U)
CHK1_HUMAN
[Raw transfer]




710_B_2(2HOG)
CHK1_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




631_A_2(4JXF)
PLK4_HUMAN
[Raw transfer]




9ZP_A_2(4B6L)
PLK3_HUMAN
[Raw transfer]




422_B_2(2HXL)
CHK1_HUMAN
[Raw transfer]




S25_A_3(3TKI)
CHK1_HUMAN
[Raw transfer]




373_B_2(2HXQ)
CHK1_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




4J7_A_2(4YUR)
PLK4_HUMAN
[Raw transfer]




S25_A_3(3TKI)
CHK1_HUMAN
[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




306_B_2(2HY0)
CHK1_HUMAN
[Raw transfer]




OT5_A_2(4CQG)
MELK_MOUSE
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




ANP_A_7(3COK)
PLK4_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




07S_A_3(3TKH)
CHK1_HUMAN
[Raw transfer]




CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




HAU_A_2(4BDI)
CHK2_HUMAN
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




CPS_B_12(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_B_10(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_C_16(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_3(4JXF)
PLK4_HUMAN
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




118 HHSearch 83.1337% -87 - C1 -4BKY 7.6 MELK_HUMAN
27 PsiBlast_CBE 77.1239% -78 - C1 -4CZU - CIPKN_ARATH
24 PsiBlast_CBE 76.4640% -79 - C1 -4CZT - CIPKN_ARATH
31 PsiBlast_CBE 75.3040% -83 - C1 -4CQG 8.6 MELK_MOUSE
10 PsiBlast_PDB 74.3440% -72 - C1 -4CZT 4.3 CIPKN_ARATH
26 PsiBlast_CBE 72.8840% -74 - C1 -4CZT 5.5 CIPKN_ARATH
25 PsiBlast_CBE 72.5240% -79 - C1 -4CZT - CIPKN_ARATH
29 PsiBlast_CBE 72.3439% -72 - C1 -4CZU 5.4 CIPKN_ARATH
30 PsiBlast_CBE 72.2939% -78 - C1 -3AQV 4.6 AAPK2_HUMAN
12 PsiBlast_PDB 71.9839% -76 - C1 -4CZU 5.7 CIPKN_ARATH
28 PsiBlast_CBE 71.8439% -79 - C1 -4CZU 4.7 CIPKN_ARATH
53 PsiBlast_CBE 71.6538% -95 - C1 -4FG7 4.9 KCC1A_HUMAN
56 PsiBlast_CBE 70.5538% -99 - C1 -4FG9 5.7 KCC1A_HUMAN
55 PsiBlast_CBE 69.3038%-100 - C1 -4FG8 5.7 KCC1A_HUMAN
134 HHSearch 69.2332% -74 - C1 -3HKO 5.4 ?
54 PsiBlast_CBE 69.0538% -95 - C1 -4FG8 4.8 KCC1A_HUMAN
57 PsiBlast_CBE 68.3138% -99 - C1 -4FG9 5.8 KCC1A_HUMAN
51 PsiBlast_CBE 67.1839% -88 - C1 -2JAM 2.0 KCC1G_HUMAN
96 PsiBlast_CBE 67.0936% -74 - C1 -3MA6 4.9 ?
52 PsiBlast_CBE 66.7639% -90 - C1 -2JAM 2.1 KCC1G_HUMAN
69 PsiBlast_CBE 66.7134% -73 - C1 -4B6L 7.5 PLK3_HUMAN
135 HHSearch 66.3334% -85 - C1 -2Y0A 2.8 DAPK1_HUMAN
95 PsiBlast_CBE 64.5936% -68 - C1 -3MA6 5.4 ?
97 PsiBlast_CBE 64.2937% -73 - C1 -2WEI 7.3 ?
139 HHSearch 63.6931% -73 - C1 -1XJD 8.1
129 HHSearch 63.3633% -79 - C1 -3TKI 6.9 CHK1_HUMAN
101 PsiBlast_CBE 63.1233% -76 - C1 -2R0U 7.4 CHK1_HUMAN
100 PsiBlast_CBE 62.1933% -81 - C1 -3TKH 5.8 CHK1_HUMAN
102 PsiBlast_CBE 62.0133% -77 - C1 -2HY0 8.3 CHK1_HUMAN
105 PsiBlast_CBE 61.6733% -77 - C1 -2HOG 7.9 CHK1_HUMAN
122 HHSearch 61.4233% -70 - C1 -2YEX 5.6 CHK1_HUMAN
107 PsiBlast_CBE 61.3434% -77 - C1 -4BDI 4.4 CHK2_HUMAN
103 PsiBlast_CBE 61.2933% -73 - C1 -2HXQ 7.0 CHK1_HUMAN
104 PsiBlast_CBE 60.8933% -77 - C1 -2HXL 6.7 CHK1_HUMAN
93 PsiBlast_CBE 60.5835% -80 - C1 -4YUR 4.5 PLK4_HUMAN
98 PsiBlast_CBE 59.0535% -86 - C1 -4JXF 9.0 PLK4_HUMAN
94 PsiBlast_CBE 58.8035% -84 - C1 -3COK 5.9 PLK4_HUMAN
130 HHSearch 58.5030% -75 - C1 -2W5A 4.4 NEK2_HUMAN