@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KCC2A_HUMAN: (2015-10-10 )
MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSGGKSGGNKKSDGVKESSESTNTTIEDEDTKVRKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKWQIVHFHRSGAPSVLPH

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_B_2(1QL6)
PHKG1_RABIT
[Raw transfer]




ATP_A_4(1PHK)
PHKG1_RABIT
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




ATP_A_5(2PHK)
PHKG1_RABIT
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




QPP_C_4(2JC6)
KCC1D_HUMAN
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




QPP_A_3(2JC6)
KCC1D_HUMAN
[Raw transfer]




3AM_B_4(3C0G)
CSKP_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




AMP_B_4(3C0H)
CSKP_HUMAN
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




3AM_A_3(3C0G)
CSKP_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




AMP_A_3(3C0H)
CSKP_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




IQU_B_6(2CKE)
DAPK2_HUMAN
[Raw transfer]




B49_A_5(2Y7J)
PHKG2_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




139 HHSearch 86.0999%-102 - C1 -3SOA 4.7 KCC2A_HUMAN
1 PsiBlast_PDB 84.7993%-102 - C1 -3SOA 4.7 KCC2A_HUMAN
5 PsiBlast_PDB 77.5392%-116 - C1 -2VN9 7.1 KCC2D_HUMAN
23 PsiBlast_CBE 75.8090%-118 - C1 -3BHH 6.4 KCC2B_HUMAN
6 PsiBlast_PDB 75.7390%-118 - C1 -3BHH 6.1 KCC2B_HUMAN
4 PsiBlast_PDB 75.3489%-112 - C1 -2V7O 6.7 KCC2G_HUMAN
2 PsiBlast_PDB 75.1590%-125 - C1 -2WEL 6.0 KCC2D_HUMAN
22 PsiBlast_CBE 74.1192%-115 - C1 -2VN9 7.0 KCC2D_HUMAN
17 PsiBlast_PDB 64.9146%-107 - C1 -3C0H 4.2 CSKP_HUMAN
12 PsiBlast_PDB 64.8447%-106 - C1 -3MFS 5.1 CSKP_HUMAN
14 PsiBlast_PDB 64.4047%-104 - C1 -3MFU 4.5 CSKP_HUMAN
11 PsiBlast_PDB 64.3347%-103 - C1 -3MFR 4.0 CSKP_HUMAN
18 PsiBlast_PDB 63.9646%-106 - C1 -3C0I 5.0 CSKP_HUMAN
142 HHSearch 63.7947%-104 - C1 -3C0I 5.0 CSKP_HUMAN
39 PsiBlast_CBE 63.4146%-107 - C1 -3C0H 4.0 CSKP_HUMAN
113 PsiBlast_CBE 62.9540%-115 - C1 -1QL6 5.9 PHKG1_RABIT
107 PsiBlast_CBE 62.2940%-116 - C1 -2Y7J 7.1 PHKG2_HUMAN
114 PsiBlast_CBE 62.1540%-114 - C1 -1PHK 5.8 PHKG1_RABIT
71 PsiBlast_CBE 61.9443%-121 - C1 -4FG7 4.4 KCC1A_HUMAN
106 PsiBlast_CBE 61.6540%-114 - C1 -2Y7J 6.5 PHKG2_HUMAN
16 PsiBlast_PDB 61.1646%-103 - C1 -3C0G 4.0 CSKP_HUMAN
154 HHSearch 61.0634%-112 - C1 -3HKO 4.4 ?
115 PsiBlast_CBE 61.0140%-116 - C1 -2PHK 5.1 PHKG1_RABIT
102 PsiBlast_CBE 60.2142%-111 - C1 -3MA6 3.5 ?
105 PsiBlast_CBE 60.1340%-116 - C1 -2Y7J 6.3 PHKG2_HUMAN
65 PsiBlast_CBE 59.9942%-116 - C1 -4FG8 5.9 KCC1A_HUMAN
148 HHSearch 59.8134%-107 - C1 -2Y0A 2.9 DAPK1_HUMAN
127 PsiBlast_CBE 59.7337%-108 - C1 -2CKE 3.9 DAPK2_HUMAN
40 PsiBlast_CBE 59.5146%-103 - C1 -3C0G 4.6 CSKP_HUMAN
126 PsiBlast_CBE 58.0837%-108 - C1 -2CKE 3.8 DAPK2_HUMAN
125 PsiBlast_CBE 57.0437%-105 - C1 -2CKE 3.7 DAPK2_HUMAN
20 PsiBlast_PDB 56.8042%-106 - C1 -2JC6 6.6 KCC1D_HUMAN
124 PsiBlast_CBE 56.5837%-105 - C1 -2CKE 3.9 DAPK2_HUMAN
109 PsiBlast_CBE 56.5637%-106 - C1 -2YAA 5.7 DAPK2_MOUSE
110 PsiBlast_CBE 56.5337%-107 - C1 -2YAA 5.1 DAPK2_MOUSE
101 PsiBlast_CBE 56.2842%-113 - C1 -3MA6 5.4 ?
64 PsiBlast_CBE 56.1742%-112 - C1 -4FG8 4.5 KCC1A_HUMAN
51 PsiBlast_CBE 55.9742%-106 - C1 -2JC6 6.6 KCC1D_HUMAN
152 HHSearch 55.4342%-107 - C1 -2W4O 5.4 KCC4_HUMAN
61 PsiBlast_CBE 55.2342%-106 - C1 -2W4O 5.4 KCC4_HUMAN
67 PsiBlast_CBE 54.1142%-107 - C1 -4FG9 5.8 KCC1A_HUMAN
69 PsiBlast_CBE 52.8141%-100 - C1 -2WEI 3.4 ?
63 PsiBlast_CBE 52.6542% -96 - C1 -2JAM 6.5 KCC1G_HUMAN
62 PsiBlast_CBE 52.1542% -97 - C1 -2JAM 6.4 KCC1G_HUMAN
66 PsiBlast_CBE 51.9742%-107 - C1 -4FG9 5.9 KCC1A_HUMAN