@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KCC2B_HUMAN: (2015-10-10 )
MATTVTCTRFTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLKGAILTTMLATRNFSVGRQTTAPATMSTAASGTTMGLVEQAKSLLNKKADGVKPQTNSTKNSAAATSPKGTLPPAALEPQTTVIHNPVDGIKESSDSANTTIEDEDAKAPRVPDILSSVRRGSGAPEAEGPLPCPSPAPFSPLPAPSPRISDILNSVRRGSGTPEAEGPLSAGPPPCLSPALLGPLSSPSPRISDILNSVRRGSGTPEAEGPSPVGPPPCPSPTIPGPLPTPSRKQEIIKTTEQLIEAVNNGDFEAYAKICDPGLTSFEPEALGNLVEGMDFHRFYFENLLAKNSKPIHTTILNPHVHVIGEDAACIAYIRLTQYIDGQGRPRTSQSEETRVWHRRDGKWQNVHFHCSGAPVAPLQ

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




ATP_B_2(1QL6)
PHKG1_RABIT
[Raw transfer]




ATP_A_4(1PHK)
PHKG1_RABIT
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




ATP_A_5(2PHK)
PHKG1_RABIT
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




QPP_C_4(2JC6)
KCC1D_HUMAN
[Raw transfer]




QPP_A_3(2JC6)
KCC1D_HUMAN
[Raw transfer]




3AM_A_3(3C0G)
CSKP_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




AMP_A_3(3C0H)
CSKP_HUMAN
[Raw transfer]




3AM_B_4(3C0G)
CSKP_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




AMP_B_4(3C0H)
CSKP_HUMAN
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




B49_A_5(2Y7J)
PHKG2_HUMAN
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_B_6(2CKE)
DAPK2_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




138 HHSearch 82.6386% -97 - C1 -3SOA 3.2 KCC2A_HUMAN
1 PsiBlast_PDB 80.5999%-119 - C1 -3BHH 6.4 KCC2B_HUMAN
21 PsiBlast_CBE 79.2399%-119 - C1 -3BHH 6.1 KCC2B_HUMAN
5 PsiBlast_PDB 77.7592%-117 - C1 -2VN9 5.8 KCC2D_HUMAN
2 PsiBlast_PDB 75.1091%-112 - C1 -2V7O 5.2 KCC2G_HUMAN
22 PsiBlast_CBE 74.8992%-116 - C1 -2VN9 5.5 KCC2D_HUMAN
3 PsiBlast_PDB 74.7584%-126 - C1 -2WEL 5.5 KCC2D_HUMAN
11 PsiBlast_PDB 63.6448%-103 - C1 -3MFS 5.3 CSKP_HUMAN
108 PsiBlast_CBE 63.5039%-117 - C1 -2PHK 5.0 PHKG1_RABIT
101 PsiBlast_CBE 63.2041%-118 - C1 -4FG7 4.4 KCC1A_HUMAN
13 PsiBlast_PDB 63.0548%-102 - C1 -3MFU 4.7 CSKP_HUMAN
10 PsiBlast_PDB 62.7548%-101 - C1 -3MFR 4.2 CSKP_HUMAN
16 PsiBlast_PDB 62.2446%-106 - C1 -3C0H 4.1 CSKP_HUMAN
107 PsiBlast_CBE 62.0738%-114 - C1 -1PHK 5.0 PHKG1_RABIT
106 PsiBlast_CBE 62.0338%-113 - C1 -1QL6 5.7 PHKG1_RABIT
104 PsiBlast_CBE 61.9740%-116 - C1 -2Y7J 6.8 PHKG2_HUMAN
105 PsiBlast_CBE 61.8340%-117 - C1 -2Y7J 7.3 PHKG2_HUMAN
15 PsiBlast_PDB 61.7846%-103 - C1 -3C0G 4.2 CSKP_HUMAN
141 HHSearch 61.7147%-104 - C1 -3C0I 4.9 CSKP_HUMAN
26 PsiBlast_CBE 61.4946%-106 - C1 -3C0H 4.0 CSKP_HUMAN
17 PsiBlast_PDB 61.3846%-105 - C1 -3C0I 4.9 CSKP_HUMAN
100 PsiBlast_CBE 60.6740%-109 - C1 -3MA6 3.3 ?
125 PsiBlast_CBE 60.3236%-111 - C1 -2CKE 3.5 DAPK2_HUMAN
155 HHSearch 60.2834%-112 - C1 -3HKO 4.8 ?
103 PsiBlast_CBE 59.8940%-117 - C1 -2Y7J 6.4 PHKG2_HUMAN
71 PsiBlast_CBE 59.7441%-113 - C1 -4FG8 5.6 KCC1A_HUMAN
123 PsiBlast_CBE 59.2736%-107 - C1 -2CKE 3.5 DAPK2_HUMAN
122 PsiBlast_CBE 58.6936%-108 - C1 -2CKE 3.8 DAPK2_HUMAN
99 PsiBlast_CBE 58.5440%-111 - C1 -3MA6 5.1 ?
27 PsiBlast_CBE 58.4546%-102 - C1 -3C0G 4.7 CSKP_HUMAN
124 PsiBlast_CBE 57.6436%-112 - C1 -2CKE 3.7 DAPK2_HUMAN
20 PsiBlast_PDB 57.5842%-104 - C1 -2JC6 4.5 KCC1D_HUMAN
70 PsiBlast_CBE 57.3641%-110 - C1 -4FG8 4.2 KCC1A_HUMAN
76 PsiBlast_CBE 56.7841%-103 - C1 -4FG9 5.6 KCC1A_HUMAN
147 HHSearch 56.3133%-106 - C1 -2Y0A 2.5 DAPK1_HUMAN
111 PsiBlast_CBE 55.8736%-107 - C1 -2YAA 4.5 DAPK2_MOUSE
110 PsiBlast_CBE 55.5236%-104 - C1 -2YAA 5.4 DAPK2_MOUSE
43 PsiBlast_CBE 55.0041%-106 - C1 -2W4O 4.7 KCC4_HUMAN
42 PsiBlast_CBE 54.1442%-105 - C1 -2JC6 4.8 KCC1D_HUMAN
150 HHSearch 54.0942%-106 - C1 -2W4O 4.7 KCC4_HUMAN
79 PsiBlast_CBE 54.0140% -99 - C1 -2JAM 4.7 KCC1G_HUMAN
78 PsiBlast_CBE 53.8940%-101 - C1 -2JAM 5.0 KCC1G_HUMAN
75 PsiBlast_CBE 53.0841%-103 - C1 -4FG9 5.9 KCC1A_HUMAN
77 PsiBlast_CBE 50.8939% -98 - C1 -2WEI 5.8 ?