@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KCC2D_HUMAN: (2015-10-10 )
MASTTTCTRFTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSAAKSLLKKPDGVKESTESSNTTIEDEDVKARKQEIIKVTEQLIEAINNGDFEAYTKICDPGLTAFEPEALGNLVEGMDFHRFYFENALSKSNKPIHTIILNPHVHLVGDDAACIAYIRLTQYMDGSGMPKTMQSEETRVWHRRDGKWQNVHFHRSGSPTVPIKPPCIPNGKENFSGGTSLWQNI

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_B_2(1QL6)
PHKG1_RABIT
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




QPP_C_4(2JC6)
KCC1D_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




QPP_A_3(2JC6)
KCC1D_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




3AM_B_4(3C0G)
CSKP_HUMAN
[Raw transfer]




AMP_B_4(3C0H)
CSKP_HUMAN
[Raw transfer]




B49_A_5(2Y7J)
PHKG2_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




3AM_A_3(3C0G)
CSKP_HUMAN
[Raw transfer]




AMP_A_3(3C0H)
CSKP_HUMAN
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_B_6(2CKE)
DAPK2_HUMAN
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




138 HHSearch 83.3488% -95 - C1 -3SOA 4.7 KCC2A_HUMAN
1 PsiBlast_PDB 81.8882% -95 - C1 -3SOA 4.7 KCC2A_HUMAN
2 PsiBlast_PDB 80.0999%-124 - C1 -2WEL 6.0 KCC2D_HUMAN
3 PsiBlast_PDB 79.8299%-114 - C1 -2VN9 7.1 KCC2D_HUMAN
21 PsiBlast_CBE 77.3799%-114 - C1 -2VN9 7.0 KCC2D_HUMAN
5 PsiBlast_PDB 76.9091%-115 - C1 -3BHH 6.1 KCC2B_HUMAN
22 PsiBlast_CBE 76.3891%-114 - C1 -3BHH 6.4 KCC2B_HUMAN
4 PsiBlast_PDB 76.2991%-109 - C1 -2V7O 6.7 KCC2G_HUMAN
141 HHSearch 65.6349%-100 - C1 -3C0I 5.0 CSKP_HUMAN
13 PsiBlast_PDB 65.4949%-100 - C1 -3MFU 4.5 CSKP_HUMAN
17 PsiBlast_PDB 65.1547%-103 - C1 -3C0H 4.2 CSKP_HUMAN
11 PsiBlast_PDB 64.9349%-103 - C1 -3MFS 5.1 CSKP_HUMAN
10 PsiBlast_PDB 64.7749%-100 - C1 -3MFR 4.0 CSKP_HUMAN
18 PsiBlast_PDB 64.4947%-102 - C1 -3C0I 5.0 CSKP_HUMAN
36 PsiBlast_CBE 63.4347%-104 - C1 -3C0H 4.0 CSKP_HUMAN
103 PsiBlast_CBE 62.3942%-111 - C1 -4FG7 4.4 KCC1A_HUMAN
126 PsiBlast_CBE 62.0238%-105 - C1 -2CKE 3.9 DAPK2_HUMAN
16 PsiBlast_PDB 61.2947%-100 - C1 -3C0G 4.0 CSKP_HUMAN
122 PsiBlast_CBE 61.1940%-111 - C1 -1QL6 5.9 PHKG1_RABIT
124 PsiBlast_CBE 61.1538%-102 - C1 -2CKE 3.7 DAPK2_HUMAN
111 PsiBlast_CBE 60.7340%-114 - C1 -2Y7J 6.5 PHKG2_HUMAN
154 HHSearch 60.5134%-107 - C1 -3HKO 4.4 ?
123 PsiBlast_CBE 60.0638%-103 - C1 -2CKE 3.9 DAPK2_HUMAN
37 PsiBlast_CBE 59.7347% -99 - C1 -3C0G 4.6 CSKP_HUMAN
112 PsiBlast_CBE 59.5940%-115 - C1 -2Y7J 7.1 PHKG2_HUMAN
100 PsiBlast_CBE 59.5041%-107 - C1 -4FG8 5.9 KCC1A_HUMAN
147 HHSearch 59.2635%-104 - C1 -2Y0A 2.9 DAPK1_HUMAN
125 PsiBlast_CBE 59.2138%-107 - C1 -2CKE 3.8 DAPK2_HUMAN
110 PsiBlast_CBE 58.8440%-115 - C1 -2Y7J 6.3 PHKG2_HUMAN
96 PsiBlast_CBE 58.8143%-105 - C1 -3MA6 3.5 ?
106 PsiBlast_CBE 58.4137%-101 - C1 -2YAA 5.7 DAPK2_MOUSE
107 PsiBlast_CBE 58.1637%-103 - C1 -2YAA 5.1 DAPK2_MOUSE
99 PsiBlast_CBE 57.8041%-105 - C1 -4FG8 4.5 KCC1A_HUMAN
62 PsiBlast_CBE 57.4741% -99 - C1 -2JC6 6.6 KCC1D_HUMAN
98 PsiBlast_CBE 57.1145%-106 - C1 -2JAM 6.6 KCC1G_HUMAN
95 PsiBlast_CBE 56.6343%-106 - C1 -3MA6 5.4 ?
97 PsiBlast_CBE 56.5545%-106 - C1 -2JAM 6.4 KCC1G_HUMAN
61 PsiBlast_CBE 56.4441%-100 - C1 -2JC6 6.6 KCC1D_HUMAN
56 PsiBlast_CBE 55.8443%-102 - C1 -2W4O 5.4 KCC4_HUMAN
151 HHSearch 55.3144%-103 - C1 -2W4O 5.4 KCC4_HUMAN
102 PsiBlast_CBE 54.0441% -99 - C1 -4FG9 5.8 KCC1A_HUMAN
101 PsiBlast_CBE 52.8741% -98 - C1 -4FG9 5.9 KCC1A_HUMAN
93 PsiBlast_CBE 51.8842% -93 - C1 -2WEI 3.4 ?