@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KPCD1_HUMAN: (2015-10-10 )
MSAPPVLRPPSPLLPVAAAAAAAAAALVPGSGPGPAPFLAPVAAPVGGISFHLQIGLSREPVLLLQDSSGDYSLAHVREMACSIVDQKFPECGFYGMYDKILLFRHDPTSENILQLVKAASDIQEGDLIEVVLSASATFEDFQIRPHALFVHSYRAPAFCDHCGEMLWGLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRRRRLSNVSLTGVSTIRTSSAELSTSAPDEPLLQKSPSESFIGREKRSNSQSYIGRPIHLDKILMSKVKVPHTFVIHSYTRPTVCQYCKKLLKGLFRQGLQCKDCRFNCHKRCAPKVPNNCLGEVTINGDLLSPGAESDVVMEEGSDDNDSERNSGLMDDMEEAMVQDAEMAMAECQNDSGEMQDPDPDHEDANRTISPSTSNNIPLMRVVQSVKHTKRKSSTVMKEGWMVHYTSKDTLRKRHYWRLDSKCITLFQNDTGSRYYKEIPLSEILSLEPVKTSALIPNGANPHCFEITTANVVYYVGENVVNPSSPSPNNSVLTSGVGADVARMWEIAIQHALMPVIPKGSSVGTGTNLHRDISVSISVSNCQIQENVDISTVYQIFPDEVLGSGQFGIVYGGKHRKTGRDVAIKIIDKLRFPTKQESQLRNEVAILQNLHHPGVVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPEHITKFLITQILVALRHLHFKNIVHCDLKPENVLLASADPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIHDQIQNAAFMYPPNPWKEISHEAIDLINNLLQVKMRKRYSVDKTLSHPWLQDYQTWLDLRELECKIGERYITHESDDLRWEKYAGEQGLQYPTHLINPSASHSDTPETEETEMKALGERVSIL

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ADP_A_6(2CN5)
CHK2_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]




ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




EBD_A_2(3LM0)
ST17B_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




AMP_B_4(3C0H)
CSKP_HUMAN
[Raw transfer]




UPX_A_2(2YCQ)
CHK2_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




ZAT_A_2(2W0J)
CHK2_HUMAN
[Raw transfer]




YIR_A_2(2YIR)
CHK2_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




AMP_A_3(3C0H)
CSKP_HUMAN
[Raw transfer]




QUE_A_2(3LM5)
ST17B_HUMAN
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




YCF_A_2(2YCF)
CHK2_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




HCW_A_2(2YCR)
CHK2_HUMAN
[Raw transfer]




A9T_A_2(4A9T)
CHK2_HUMAN
[Raw transfer]




NXP_A_2(2YCS)
CHK2_HUMAN
[Raw transfer]




16X_B_8(2X4F)
MYLK4_HUMAN
[Raw transfer]




YIT_A_2(2YIT)
CHK2_HUMAN
[Raw transfer]




16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]




Y27_C_3(2GNF)
KAPCA_BOVIN
[Raw transfer]




PGE_A_2(4UV0)
?
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




0R4_A_2(4EJN)
AKT1_HUMAN
[Raw transfer]




EDO_A_6(2X4F)
MYLK4_HUMAN
[Raw transfer]




37 PsiBlast_CBE 71.6335%-116 - C2 -3MFR 3.9 CSKP_HUMAN
36 PsiBlast_CBE 70.4035%-116 - C2 -3MFS 4.6 CSKP_HUMAN
49 PsiBlast_CBE 69.2334%-114 - C2 -3C0H 4.1 CSKP_HUMAN
35 PsiBlast_CBE 69.1035%-112 - C2 -3MFU 4.4 CSKP_HUMAN
18 PsiBlast_PDB 68.9835%-124 - C2 -4FG8 5.7 KCC1A_HUMAN
17 PsiBlast_PDB 68.3435%-119 - C2 -4FG7 4.6 KCC1A_HUMAN
23 PsiBlast_CBE 68.0935%-121 - C2 -4FG8 4.7 KCC1A_HUMAN
48 PsiBlast_CBE 67.3234%-110 - C2 -3C0I 4.5 CSKP_HUMAN
92 PsiBlast_CBE 67.1334%-101 - C2 -2XUU 5.8 DAPK1_HUMAN
50 PsiBlast_CBE 67.1234%-112 - C2 -3C0H 4.3 CSKP_HUMAN
54 PsiBlast_CBE 65.7331%-102 - C2 -3LM0 6.4 ST17B_HUMAN
57 PsiBlast_CBE 65.6434%-111 - C2 -2YAA 5.1 DAPK2_MOUSE
65 PsiBlast_CBE 65.4635%-114 - C2 -3BHH 5.9 KCC2B_HUMAN
97 PsiBlast_CBE 65.3032% -92 - C2 -4UV0 1.9 ?
94 PsiBlast_CBE 65.2835%-109 - C2 -3MA6 4.4 ?
10 PsiBlast_PDB 65.2839%-111 - C2 -2YCQ 8.5 CHK2_HUMAN
125 HHSearch 65.1630%-101 - C2 -3HKO 5.3 ?
56 PsiBlast_CBE 64.9534%-111 - C2 -2YAA 5.4 DAPK2_MOUSE
42 PsiBlast_CBE 64.4536%-109 - C2 -2V7O 6.4 KCC2G_HUMAN
64 PsiBlast_CBE 64.1935%-114 - C2 -3BHH 6.2 KCC2B_HUMAN
1 PsiBlast_PDB 63.6539%-113 - C2 -2YCR 6.4 CHK2_HUMAN
119 HHSearch 63.5833% -94 - C2 -2X4F 5.6 MYLK4_HUMAN
8 PsiBlast_PDB 63.4139%-112 - C2 -2YIR 8.7 CHK2_HUMAN
11 PsiBlast_PDB 63.3339%-110 - C2 -2YCS 6.3 CHK2_HUMAN
3 PsiBlast_PDB 63.0739%-111 - C2 -2CN5 6.2 CHK2_HUMAN
2 PsiBlast_PDB 62.7339%-104 - C2 -2YCF 7.3 CHK2_HUMAN
53 PsiBlast_CBE 62.4731%-106 - C2 -3LM5 4.0 ST17B_HUMAN
7 PsiBlast_PDB 62.3139%-110 - C2 -2W0J 7.4 CHK2_HUMAN
9 PsiBlast_PDB 62.0339%-112 - C2 -2YIT 7.8 CHK2_HUMAN
93 PsiBlast_CBE 61.2535%-105 - C2 -3MA6 5.3 ?
4 PsiBlast_PDB 61.2339%-110 - C2 -2XM9 7.7 CHK2_HUMAN
22 PsiBlast_CBE 60.9937%-105 - C2 -2JAM 2.5 KCC1G_HUMAN
5 PsiBlast_PDB 60.9539%-105 - C2 -4A9T 6.0 CHK2_HUMAN
106 PsiBlast_CBE 60.3335%-105 - C2 -2GNF 4.2 KAPCA_BOVIN
34 PsiBlast_CBE 60.1634%-102 - C2 -2WEI 7.0 ?
45 PsiBlast_CBE 59.7534% -92 - C2 -2X4F 3.6 MYLK4_HUMAN
44 PsiBlast_CBE 59.6834% -95 - C2 -2X4F 5.7 MYLK4_HUMAN
132 HHSearch 58.7931%-101 - C2 -4BGQ 7.5 CDKL5_HUMAN