@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KPCD2_HUMAN: (2015-10-10 )
MATAPSYPAGLPGSPGPGSPPPPGGLELQSPPPLLPQIPAPGSGVSFHIQIGLTREFVLLPAASELAHVKQLACSIVDQKFPECGFYGLYDKILLFKHDPTSANLLQLVRSSGDIQEGDLVEVVLSASATFEDFQIRPHALTVHSYRAPAFCDHCGEMLFGLVRQGLKCDGCGLNYHKRCAFSIPNNCSGARKRRLSSTSLASGHSVRLGTSESLPCTAEELSRSTTELLPRRPPSSSSSSSASSYTGRPIELDKMLLSKVKVPHTFLIHSYTRPTVCQACKKLLKGLFRQGLQCKDCKFNCHKRCATRVPNDCLGEALINGDVPMEEATDFSEADKSALMDESEDSGVIPGSHSENALHASEEEEGEGGKAQSSLGYIPLMRVVQSVRHTTRKSSTTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALMPVILQDAPSAPGHAPHRQASLSISVSNSQIQENVDIATVYQIFPDEVLGSGQFGVVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQSLRHPGIVNLECMFETPEKVFVVMEKLHGDMLEMILSSEKGRLPERLTKFLITQILVALRHLHFKNIVHCDLKPENVLLASADPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLLNQGYNRSLDMWSVGVIMYVSLSGTFPFNEDEDINDQIQNAAFMYPASPWSHISAGAIDLINNLLQVKMRKRYSVDKSLSHPWLQEYQTWLDLRELEGKMGERYITHESDDVRWEQFAAEHPLPGSGLPTDRDLGGACPPQDHDMQGLAERISVL

Atome Classification :

(64 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(3F5U)
DAPK1_HUMAN
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ANP_B_2(3DFC)
DAPK1_HUMAN
[Raw transfer]




ANP_A_2(3EHA)
DAPK1_HUMAN
[Raw transfer]




ANP_A_2(1JKL)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(3EH9)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2W4J)
DAPK1_HUMAN
[Raw transfer]




ANP_A_3(1IG1)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]




ANP_A_5(3IGO)
?
[Raw transfer]




ANP_A_3(1JKK)
DAPK1_HUMAN
[Raw transfer]




ACP_C_12(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ACP_B_10(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2W4K)
DAPK1_HUMAN
[Raw transfer]




ACP_A_5(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]




ADP_A_6(2CN5)
CHK2_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




ACP_D_13(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




AMP_A_6(4Y5Q)
?
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




EBD_A_2(3LM0)
ST17B_HUMAN
[Raw transfer]




38G_A_2(4TXC)
DAPK1_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]




3AM_B_4(3C0G)
CSKP_HUMAN
[Raw transfer]




STU_B_2(1WVY)
DAPK1_HUMAN
[Raw transfer]




IQU_B_6(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




BK1_A_5(3NCG)
?
[Raw transfer]




BK3_A_6(3MWU)
?
[Raw transfer]




4FT_A_8(4YO4)
DAPK1_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




3AM_A_3(3C0G)
CSKP_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




AMP_B_4(3C0H)
CSKP_HUMAN
[Raw transfer]




YIR_A_2(2YIR)
CHK2_HUMAN
[Raw transfer]




UPX_A_2(2YCQ)
CHK2_HUMAN
[Raw transfer]




ZAT_A_2(2W0J)
CHK2_HUMAN
[Raw transfer]




AMP_A_3(3C0H)
CSKP_HUMAN
[Raw transfer]




DRG_A_2(1P4F)
DAPK1_HUMAN
[Raw transfer]




QUE_A_2(3LM5)
ST17B_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




YCF_A_2(2YCF)
CHK2_HUMAN
[Raw transfer]




16X_B_8(2X4F)
MYLK4_HUMAN
[Raw transfer]




A9T_A_2(4A9T)
CHK2_HUMAN
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




DKG_A_4(4YPD)
DAPK1_HUMAN
[Raw transfer]




HCW_A_2(2YCR)
CHK2_HUMAN
[Raw transfer]




NXP_A_2(2YCS)
CHK2_HUMAN
[Raw transfer]




OSV_A_2(2YAK)
DAPK1_HUMAN
[Raw transfer]




1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]




16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]




YIT_A_2(2YIT)
CHK2_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




0R4_A_2(4EJN)
AKT1_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_6(2X4F)
MYLK4_HUMAN
[Raw transfer]




18 PsiBlast_PDB 67.6835%-118 - C1 -4FG7 4.6 KCC1A_HUMAN
29 PsiBlast_CBE 66.6636%-116 - C1 -3MFR 3.9 CSKP_HUMAN
28 PsiBlast_CBE 65.8136%-116 - C1 -3MFS 4.6 CSKP_HUMAN
27 PsiBlast_CBE 65.6436%-112 - C1 -3MFU 4.4 CSKP_HUMAN
121 HHSearch 65.2236%-109 - C1 -3C0I 4.5 CSKP_HUMAN
45 PsiBlast_CBE 65.1935%-114 - C1 -3C0H 4.1 CSKP_HUMAN
34 PsiBlast_CBE 64.7434% -99 - C1 -3NCG 6.3 ?
68 PsiBlast_CBE 64.5634%-102 - C1 -3EH9 5.7 DAPK1_HUMAN
60 PsiBlast_CBE 64.0834% -98 - C1 -4TXC 8.1 DAPK1_HUMAN
81 PsiBlast_CBE 64.0234%-102 - C1 -2YAK 8.1 DAPK1_HUMAN
49 PsiBlast_CBE 63.9735%-100 - C1 -2XUU 5.8 DAPK1_HUMAN
127 HHSearch 63.8830%-105 - C1 -3HKO 5.3 ?
73 PsiBlast_CBE 63.7434%-100 - C1 -2W4K 5.5 DAPK1_HUMAN
74 PsiBlast_CBE 63.7134% -98 - C1 -2W4J 5.1 DAPK1_HUMAN
47 PsiBlast_CBE 63.4935%-116 - C1 -3C0G 4.6 CSKP_HUMAN
57 PsiBlast_CBE 63.4534%-100 - C1 -4B4L 2.3 DAPK1_HUMAN
48 PsiBlast_CBE 63.2535%-112 - C1 -3C0G 4.1 CSKP_HUMAN
88 PsiBlast_CBE 63.1634%-112 - C1 -2CKE 3.8 DAPK2_HUMAN
24 PsiBlast_CBE 63.1035%-118 - C1 -4FG8 4.7 KCC1A_HUMAN
32 PsiBlast_CBE 62.9636%-107 - C1 -2VN9 6.8 KCC2D_HUMAN
25 PsiBlast_CBE 62.8935%-121 - C1 -4FG8 5.7 KCC1A_HUMAN
35 PsiBlast_CBE 62.7634%-102 - C1 -3MWU 7.1 ?
52 PsiBlast_CBE 62.5835%-111 - C1 -2YAA 5.4 DAPK2_MOUSE
36 PsiBlast_CBE 62.5634%-100 - C1 -3IGO 5.7 ?
53 PsiBlast_CBE 62.5335%-110 - C1 -2YAA 5.1 DAPK2_MOUSE
62 PsiBlast_CBE 62.4934% -97 - C1 -3F5U 5.9 DAPK1_HUMAN
105 PsiBlast_CBE 62.2934% -99 - C1 -3DFC 6.8 DAPK1_HUMAN
46 PsiBlast_CBE 62.2935%-112 - C1 -3C0H 4.3 CSKP_HUMAN
71 PsiBlast_CBE 62.2334%-100 - C1 -1IG1 5.3 DAPK1_HUMAN
65 PsiBlast_CBE 62.1634% -99 - C1 -4YO4 3.7 DAPK1_HUMAN
10 PsiBlast_PDB 62.1437%-112 - C1 -2YCQ 8.5 CHK2_HUMAN
67 PsiBlast_CBE 62.0934%-101 - C1 -3EHA 6.9 DAPK1_HUMAN
122 HHSearch 61.9932% -96 - C1 -2X4F 5.6 MYLK4_HUMAN
64 PsiBlast_CBE 61.9934%-100 - C1 -4YPD 2.8 DAPK1_HUMAN
83 PsiBlast_CBE 61.8334%-100 - C1 -1WVY 7.4 DAPK1_HUMAN
50 PsiBlast_CBE 61.6635%-106 - C1 -2V7O 6.4 KCC2G_HUMAN
77 PsiBlast_CBE 61.4834%-113 - C1 -3ZXT 4.2 DAPK1_HUMAN
2 PsiBlast_PDB 61.4637%-112 - C1 -2CN5 6.2 CHK2_HUMAN
87 PsiBlast_CBE 61.2034%-108 - C1 -2CKE 3.8 DAPK2_HUMAN
70 PsiBlast_CBE 61.1134% -97 - C1 -1JKK 5.3 DAPK1_HUMAN
6 PsiBlast_PDB 60.9437%-114 - C1 -2YCR 6.4 CHK2_HUMAN
8 PsiBlast_PDB 60.8037%-114 - C1 -2YIR 8.7 CHK2_HUMAN
89 PsiBlast_CBE 60.7834%-107 - C1 -2CKE 4.0 DAPK2_HUMAN
86 PsiBlast_CBE 60.7034%-109 - C1 -2CKE 4.1 DAPK2_HUMAN
33 PsiBlast_CBE 60.6534% -99 - C1 -4Y5Q 4.8 ?
69 PsiBlast_CBE 60.6234% -99 - C1 -1JKL 5.1 DAPK1_HUMAN
11 PsiBlast_PDB 60.5437%-112 - C1 -2YCS 6.3 CHK2_HUMAN
133 HHSearch 60.1633%-106 - C1 -4BGQ 7.5 CDKL5_HUMAN
78 PsiBlast_CBE 59.8834%-100 - C1 -3ZXT 4.1 DAPK1_HUMAN
7 PsiBlast_PDB 59.6437%-113 - C1 -2W0J 7.4 CHK2_HUMAN
9 PsiBlast_PDB 59.5537%-112 - C1 -2YIT 7.8 CHK2_HUMAN
40 PsiBlast_CBE 59.3535%-103 - C1 -2WEI 7.2 ?
12 PsiBlast_PDB 59.3137%-104 - C1 -2YCF 7.3 CHK2_HUMAN
102 PsiBlast_CBE 58.8833%-104 - C1 -3LM0 6.7 ST17B_HUMAN
80 PsiBlast_CBE 58.8334% -99 - C1 -3ZXT 4.4 DAPK1_HUMAN
72 PsiBlast_CBE 58.7234%-101 - C1 -1P4F 4.9 DAPK1_HUMAN
131 HHSearch 58.6333%-106 - C1 -3LM5 4.7 ST17B_HUMAN
16 PsiBlast_PDB 58.3137%-107 - C1 -2JAM 2.0 KCC1G_HUMAN
4 PsiBlast_PDB 57.9037%-106 - C1 -4A9T 6.0 CHK2_HUMAN
22 PsiBlast_CBE 57.8937%-103 - C1 -2JAM 2.5 KCC1G_HUMAN
3 PsiBlast_PDB 57.6537%-110 - C1 -2XM9 7.7 CHK2_HUMAN
79 PsiBlast_CBE 57.0434%-100 - C1 -3ZXT 5.2 DAPK1_HUMAN
41 PsiBlast_CBE 55.3732% -87 - C1 -2X4F 5.7 MYLK4_HUMAN
42 PsiBlast_CBE 54.9332% -85 - C1 -2X4F 3.6 MYLK4_HUMAN