@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KPCD3_HUMAN: (2015-10-10 )
MSANNSPPSAQKSVLPTAIPAVLPAASPCSSPKTGLSARLSNGSFSAPSLTNSRGSVHTVSFLLQIGLTRESVTIEAQELSLSAVKDLVCSIVYQKFPECGFFGMYDKILLFRHDMNSENILQLITSADEIHEGDLVEVVLSALATVEDFQIRPHTLYVHSYKAPTFCDYCGEMLWGLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRKRRLSNVSLPGPGLSVPRPLQPEYVALPSEESHVHQEPSKRIPSWSGRPIWMEKMVMCRVKVPHTFAVHSYTRPTICQYCKRLLKGLFRQGMQCKDCKFNCHKRCASKVPRDCLGEVTFNGEPSSLGTDTDIPMDIDNNDINSDSSRGLDDTEEPSPPEDKMFFLDPSDLDVERDEEAVKTISPSTSNNIPLMRVVQSIKHTKRKSSTMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMPVTPQASVCTSPGQGKDHKDLSTSISVSNCQIQENVDISTVYQIFADEVLGSGQFGIVYGGKHRKTGRDVAIKVIDKMRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKSRLPERITKFMVTQILVALRNLHFKNIVHCDLKPENVLLASAEPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRSKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWREISGEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLREFETRIGERYITHESDDARWEIHAYTHNLVYPKHFIMAPNPDDMEEDP

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(3F5U)
DAPK1_HUMAN
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ANP_A_2(1JKL)
DAPK1_HUMAN
[Raw transfer]




ANP_A_2(3EHA)
DAPK1_HUMAN
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ANP_A_3(1IG1)
DAPK1_HUMAN
[Raw transfer]




ACP_C_12(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(3EH9)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]




ANP_A_3(1JKK)
DAPK1_HUMAN
[Raw transfer]




ADP_A_6(2CN5)
CHK2_HUMAN
[Raw transfer]




ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




ACP_D_13(3ZXT)
DAPK1_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




3AM_B_4(3C0G)
CSKP_HUMAN
[Raw transfer]




3AM_A_3(3C0G)
CSKP_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




4FT_A_8(4YO4)
DAPK1_HUMAN
[Raw transfer]




AMP_B_4(3C0H)
CSKP_HUMAN
[Raw transfer]




LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




AMP_A_3(3C0H)
CSKP_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




UPX_A_2(2YCQ)
CHK2_HUMAN
[Raw transfer]




STU_A_7(1NXK)
MAPK2_HUMAN
[Raw transfer]




ZAT_A_2(2W0J)
CHK2_HUMAN
[Raw transfer]




YIR_A_2(2YIR)
CHK2_HUMAN
[Raw transfer]




DRG_A_2(1P4F)
DAPK1_HUMAN
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




A9T_A_2(4A9T)
CHK2_HUMAN
[Raw transfer]




DKG_A_4(4YPD)
DAPK1_HUMAN
[Raw transfer]




16X_B_8(2X4F)
MYLK4_HUMAN
[Raw transfer]




YCF_A_2(2YCF)
CHK2_HUMAN
[Raw transfer]




QUE_A_2(3LM5)
ST17B_HUMAN
[Raw transfer]




16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




NXP_A_2(2YCS)
CHK2_HUMAN
[Raw transfer]




HCW_A_2(2YCR)
CHK2_HUMAN
[Raw transfer]




YIT_A_2(2YIT)
CHK2_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




34 PsiBlast_CBE 69.0934%-107 - C1 -3MFR 3.9 CSKP_HUMAN
33 PsiBlast_CBE 68.8134%-107 - C1 -3MFS 4.6 CSKP_HUMAN
32 PsiBlast_CBE 67.6434%-104 - C1 -3MFU 4.4 CSKP_HUMAN
50 PsiBlast_CBE 66.4933%-106 - C1 -3C0H 4.1 CSKP_HUMAN
18 PsiBlast_PDB 65.7834%-115 - C1 -4FG7 4.6 KCC1A_HUMAN
56 PsiBlast_CBE 65.6434% -96 - C1 -2XUU 5.8 DAPK1_HUMAN
49 PsiBlast_CBE 65.5333%-104 - C1 -3C0I 4.5 CSKP_HUMAN
53 PsiBlast_CBE 65.3533%-106 - C1 -3C0G 4.1 CSKP_HUMAN
100 PsiBlast_CBE 65.0533% -99 - C1 -3EH9 5.7 DAPK1_HUMAN
51 PsiBlast_CBE 64.7233%-105 - C1 -3C0H 4.3 CSKP_HUMAN
52 PsiBlast_CBE 64.1533%-108 - C1 -3C0G 4.6 CSKP_HUMAN
20 PsiBlast_PDB 63.8234%-119 - C1 -4FG8 5.7 KCC1A_HUMAN
6 PsiBlast_PDB 63.5339%-107 - C1 -2YCQ 8.5 CHK2_HUMAN
104 PsiBlast_CBE 63.1233% -96 - C1 -1IG1 5.3 DAPK1_HUMAN
96 PsiBlast_CBE 62.9833% -97 - C1 -4YPD 2.8 DAPK1_HUMAN
97 PsiBlast_CBE 62.9733% -96 - C1 -4YO4 3.7 DAPK1_HUMAN
90 PsiBlast_CBE 62.8535%-103 - C1 -3MA6 4.4 ?
99 PsiBlast_CBE 62.6333% -97 - C1 -3EHA 6.9 DAPK1_HUMAN
106 PsiBlast_CBE 62.6133%-113 - C1 -3ZXT 4.2 DAPK1_HUMAN
93 PsiBlast_CBE 62.3633% -93 - C1 -3F5U 5.9 DAPK1_HUMAN
9 PsiBlast_PDB 62.2639%-106 - C1 -2CN5 6.2 CHK2_HUMAN
44 PsiBlast_CBE 62.2235%-103 - C1 -2YAA 5.4 DAPK2_MOUSE
4 PsiBlast_PDB 62.0739%-108 - C1 -2YIR 8.7 CHK2_HUMAN
45 PsiBlast_CBE 62.0635%-103 - C1 -2YAA 5.1 DAPK2_MOUSE
68 PsiBlast_CBE 62.0434%-108 - C1 -3BHH 5.9 KCC2B_HUMAN
41 PsiBlast_CBE 62.0335%-104 - C1 -2V7O 6.3 KCC2G_HUMAN
7 PsiBlast_PDB 61.8739%-106 - C1 -2YCS 6.3 CHK2_HUMAN
103 PsiBlast_CBE 61.8633% -93 - C1 -1JKK 5.3 DAPK1_HUMAN
69 PsiBlast_CBE 61.7534%-107 - C1 -3BHH 5.6 KCC2B_HUMAN
2 PsiBlast_PDB 61.6139%-108 - C1 -2YCR 6.4 CHK2_HUMAN
23 PsiBlast_CBE 61.5934%-116 - C1 -4FG8 4.7 KCC1A_HUMAN
102 PsiBlast_CBE 61.2733% -96 - C1 -1JKL 5.1 DAPK1_HUMAN
89 PsiBlast_CBE 60.7135% -99 - C1 -3MA6 5.3 ?
105 PsiBlast_CBE 60.6033% -97 - C1 -1P4F 4.9 DAPK1_HUMAN
5 PsiBlast_PDB 60.5339%-107 - C1 -2YIT 7.8 CHK2_HUMAN
8 PsiBlast_PDB 60.4739%-100 - C1 -2YCF 7.3 CHK2_HUMAN
26 PsiBlast_CBE 60.2135% -98 - C1 -2WEI 7.0 ?
107 PsiBlast_CBE 60.0333% -97 - C1 -3ZXT 4.1 DAPK1_HUMAN
123 HHSearch 59.9230% -95 - C1 -3HKO 5.3 ?
11 PsiBlast_PDB 59.8639% -99 - C1 -4A9T 6.0 CHK2_HUMAN
10 PsiBlast_PDB 59.5339%-104 - C1 -2XM9 7.7 CHK2_HUMAN
3 PsiBlast_PDB 59.3739%-106 - C1 -2W0J 7.4 CHK2_HUMAN
16 PsiBlast_PDB 59.0737%-106 - C1 -2JAM 2.0 KCC1G_HUMAN
127 HHSearch 58.6732%-104 - C1 -3LM5 4.7 ST17B_HUMAN
135 HHSearch 58.3531% -95 - C1 -4BGQ 7.5 CDKL5_HUMAN
119 HHSearch 57.8331% -81 - C1 -2X4F 5.6 MYLK4_HUMAN
22 PsiBlast_CBE 56.9537%-101 - C1 -2JAM 2.5 KCC1G_HUMAN
54 PsiBlast_CBE 55.9433% -92 - C1 -2X4F 5.7 MYLK4_HUMAN
137 HHSearch 47.5433% -94 - C1 -1NXK 7.9 MAPK2_HUMAN