@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KSR2_HUMAN: (2015-10-11 )
MDEENMTKSEEQQPLSLQKALQQCELVQNMIDLSISNLEGLRTKCATSNDLTQKEIRTLESKLVKYFSRQLSCKKKVALQERNAELDGFPQLRHWFRIVDVRKEVLEEISPGQLSLEDLLEMTDEQVCETVEKYGANREECARLNASLSCLRNVHMSGGNLSKQDWTIQWPTTETGKENNPVCPPEPTPWIRTHLSQSPRVPSKCVQHYCHTSPTPGAPVYTHVDRLTVDAYPGLCPPPPLESGHRSLPPSPRQRHAVRTPPRTPNIVTTVTPPGTPPMRKKNKLKPPGTPPPSSRKLIHLIPGFTALHRSKSHEFQLGHRVDEAHTPKAKKKSKPLNLKIHSSVGSCENIPSQQRSPLLSERSLRSFFVGHAPFLPSTPPVHTEANFSANTLSVPRWSPQIPRRDLGNSIKHRFSTKYWMSQTCTVCGKGMLFGLKCKNCKLKCHNKCTKEAPPCHLLIIHRGDPARLVRTESVPCDINNPLRKPPRYSDLHISQTLPKTNKINKDHIPVPYQPDSSSNPSSTTSSTPSSPAPPLPPSATPPSPLHPSPQCTRQQKNFNLPASHYYKYKQQFIFPDVVPVPETPTRAPQVILHPVTSNPILEGNPLLQIEVEPTSENEEVHDEAEESEDDFEEMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGHFWKSAEL

Atome Classification :

(66 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BR2_A_3(3SKC)
BRAF_HUMAN
[Raw transfer]




55J_A_3(5CT7)
?
[Raw transfer]




B0R_A_3(3TV6)
BRAF_HUMAN
[Raw transfer]




4Z5_A_3(5C9C)
?
[Raw transfer]




BR2_B_4(3SKC)

[Raw transfer]




55J_B_4(5CT7)
?
[Raw transfer]




B1E_B_4(4G9R)

[Raw transfer]




B1E_A_3(4G9R)
BRAF_HUMAN
[Raw transfer]




RI8_A_3(4EHE)
BRAF_HUMAN
[Raw transfer]




L1E_A_4(3IDP)
BRAF_HUMAN
[Raw transfer]




RI9_A_3(4EHG)
BRAF_HUMAN
[Raw transfer]




0WP_B_4(4G9C)

[Raw transfer]




TV4_A_3(3TV4)
BRAF_HUMAN
[Raw transfer]




B0R_B_4(3TV6)

[Raw transfer]




T1Q_B_4(4E4X)

[Raw transfer]




032_A_3(3OG7)
BRAF_HUMAN
[Raw transfer]




RI9_B_4(4EHG)

[Raw transfer]




ATP_B_3(2Y4I)

[Raw transfer]




RI8_B_4(4EHE)

[Raw transfer]




B96_C_7(4JVG)
BRAF_HUMAN
[Raw transfer]




CQE_B_4(4CQE)
?
[Raw transfer]




DFS_B_4(4MBJ)

[Raw transfer]




324_A_3(3C4C)
BRAF_HUMAN
[Raw transfer]




T1Q_A_3(4E4X)
BRAF_HUMAN
[Raw transfer]




L1E_B_3(3IDP)

[Raw transfer]




B96_B_5(4JVG)
BRAF_HUMAN
[Raw transfer]




BAX_B_4(1UWH)

[Raw transfer]




B96_A_6(4JVG)
BRAF_HUMAN
[Raw transfer]




1SU_A_3(4KSP)
BRAF_HUMAN
[Raw transfer]




CQE_A_3(4CQE)
?
[Raw transfer]




SM6_A_3(3PSB)
BRAF_HUMAN
[Raw transfer]




10Z_A_4(4H58)
BRAF_HUMAN
[Raw transfer]




TV4_B_4(3TV4)

[Raw transfer]




FNI_A_3(3PPK)
BRAF_HUMAN
[Raw transfer]




BAX_B_4(1UWJ)

[Raw transfer]




SM7_A_3(3PSD)
BRAF_HUMAN
[Raw transfer]




SM7_B_4(3PSD)

[Raw transfer]




FNI_B_4(3PPK)

[Raw transfer]




BAX_A_3(1UWJ)
BRAF_HUMAN
[Raw transfer]




324_B_4(3C4C)

[Raw transfer]




2VX_B_4(4PP7)

[Raw transfer]




BAX_A_3(1UWH)
BRAF_HUMAN
[Raw transfer]




29L_B_4(4MNF)

[Raw transfer]




2VX_A_3(4PP7)
BRAF_HUMAN
[Raw transfer]




B96_D_8(4JVG)

[Raw transfer]




831_B_6(3II5)

[Raw transfer]




FP4_A_3(3PRI)
BRAF_HUMAN
[Raw transfer]




SM6_B_4(3PSB)

[Raw transfer]




FOI_B_4(3PPJ)

[Raw transfer]




FP4_B_4(3PRI)

[Raw transfer]




29L_A_3(4MNF)
BRAF_HUMAN
[Raw transfer]




SM5_B_4(3D4Q)

[Raw transfer]




SM5_A_3(3D4Q)
BRAF_HUMAN
[Raw transfer]




FOI_A_3(3PPJ)
BRAF_HUMAN
[Raw transfer]




0WP_A_3(4G9C)
BRAF_HUMAN
[Raw transfer]




831_A_3(3II5)
BRAF_HUMAN
[Raw transfer]




324_B_4(4WO5)

[Raw transfer]




DFS_A_3(4MBJ)
BRAF_HUMAN
[Raw transfer]




FP3_A_3(3PRF)
BRAF_HUMAN
[Raw transfer]




SM5_A_3(3OMV)
RAF1_HUMAN
[Raw transfer]




SM5_B_4(3OMV)

[Raw transfer]




STU_A_3(3P86)
CTR1_ARATH
[Raw transfer]




FP3_B_4(3PRF)

[Raw transfer]




734_A_3(4E26)
BRAF_HUMAN
[Raw transfer]




734_B_4(4E26)

[Raw transfer]




RSW_A_3(3Q4C)
BRAF_HUMAN
[Raw transfer]




1 PsiBlast_PDB 94.49100%-112 - C3 -2Y4I 5.6
47 PsiBlast_CBE 74.0236%-109 - C3 -3PSD 8.8
41 PsiBlast_CBE 73.5836%-109 - C3 -4E26 2.4
4 PsiBlast_PDB 73.2736%-108 - C3 -4MNF 7.0 BRAF_HUMAN
58 PsiBlast_CBE 72.9736%-107 - C3 -3IDP 7.5
5 PsiBlast_PDB 72.9735%-110 - C3 -3OG7 8.1 BRAF_HUMAN
17 PsiBlast_PDB 72.8936%-108 - C3 -3Q4C 8.1 BRAF_HUMAN
12 PsiBlast_PDB 72.8036%-108 - C3 -3PSB 6.9 BRAF_HUMAN
18 PsiBlast_PDB 72.7436%-109 - C3 -3PSD 8.5 BRAF_HUMAN
10 PsiBlast_PDB 72.7436%-106 - C3 -5CT7 7.2 ?
2 PsiBlast_PDB 72.7335% -97 - C3 -3C4C 6.6 BRAF_HUMAN
26 PsiBlast_CBE 72.6636%-111 - C3 -4MNF 7.5
36 PsiBlast_CBE 72.5836%-105 - C3 -4G9C 2.8 BRAF_HUMAN
44 PsiBlast_CBE 72.4936%-109 - C3 -3TV6 6.2 BRAF_HUMAN
52 PsiBlast_CBE 72.3436%-107 - C3 -3PPJ 7.5
56 PsiBlast_CBE 72.2136%-109 - C3 -1UWH 4.8 BRAF_HUMAN
55 PsiBlast_CBE 72.0236%-108 - C3 -1UWH 5.1
51 PsiBlast_CBE 71.9136%-105 - C3 -3PPK 8.1
35 PsiBlast_CBE 71.5436%-103 - C3 -4G9C 5.3
21 PsiBlast_CBE 71.5435%-106 - C3 -3C4C 1.8
15 PsiBlast_PDB 71.4736%-107 - C3 -3PRF 6.7 BRAF_HUMAN
23 PsiBlast_CBE 71.3335%-104 - C3 -4JVG 4.8 BRAF_HUMAN
53 PsiBlast_CBE 71.2136%-108 - C3 -3D4Q 7.5
3 PsiBlast_PDB 71.2035%-104 - C3 -4JVG 5.1 BRAF_HUMAN
48 PsiBlast_CBE 71.1436%-105 - C3 -3PSB 7.5
60 PsiBlast_CBE 71.1236%-106 - C3 -5C9C 6.5 ?
32 PsiBlast_CBE 71.0536%-103 - C3 -5CT7 7.0 ?
61 PsiBlast_CBE 71.0136%-101 - C3 -4G9R 6.8
13 PsiBlast_PDB 70.9536%-107 - C3 -3PPJ 7.8 BRAF_HUMAN
11 PsiBlast_PDB 70.8936%-107 - C3 -3D4Q 7.7 BRAF_HUMAN
59 PsiBlast_CBE 70.8836%-106 - C3 -3IDP 6.1 BRAF_HUMAN
14 PsiBlast_PDB 70.8736%-110 - C3 -3PPK 8.4 BRAF_HUMAN
66 PsiBlast_CBE 70.8636%-101 - C3 -1UWJ 4.9 BRAF_HUMAN
24 PsiBlast_CBE 70.7135%-103 - C3 -4JVG 4.0 BRAF_HUMAN
57 PsiBlast_CBE 70.6936%-113 - C3 -4H58 7.0 BRAF_HUMAN
20 PsiBlast_PDB 70.2936%-107 - C3 -3TV4 6.0 BRAF_HUMAN
50 PsiBlast_CBE 70.2636%-107 - C3 -3PRF 7.5
37 PsiBlast_CBE 70.1936%-104 - C3 -4EHE 6.7
31 PsiBlast_CBE 70.1636%-105 - C3 -4MBJ 5.6
63 PsiBlast_CBE 70.1536%-105 - C3 -4EHG 5.0
19 PsiBlast_PDB 70.1036%-105 - C3 -3SKC 5.6 BRAF_HUMAN
33 PsiBlast_CBE 70.0236%-100 - C3 -4PP7 7.2
25 PsiBlast_CBE 69.9635% -99 - C3 -4WO5 8.3
49 PsiBlast_CBE 69.7336%-104 - C3 -3PRI 7.6
62 PsiBlast_CBE 69.6836%-101 - C3 -4G9R 5.0 BRAF_HUMAN
42 PsiBlast_CBE 69.6636%-102 - C3 -4E26 4.7 BRAF_HUMAN
38 PsiBlast_CBE 69.6536%-110 - C3 -4EHE 5.1 BRAF_HUMAN
30 PsiBlast_CBE 69.5336%-105 - C3 -3II5 4.4
54 PsiBlast_CBE 69.4536%-104 * C3 *4KSP 4.3 BRAF_HUMAN
6 PsiBlast_PDB 69.2735%-100 - C3 -4CQE 12.1 ?
64 PsiBlast_CBE 69.2536%-106 - C3 -4EHG 6.7 BRAF_HUMAN
39 PsiBlast_CBE 69.1836%-103 - C3 -4E4X 7.3
27 PsiBlast_CBE 69.0035%-110 - C3 -4CQE 11.7 ?
40 PsiBlast_CBE 68.9636%-111 - C3 -4E4X 6.8 BRAF_HUMAN
34 PsiBlast_CBE 68.9136%-110 - C3 -4PP7 7.6 BRAF_HUMAN
22 PsiBlast_CBE 68.8835%-101 - C3 -4JVG 3.8
9 PsiBlast_PDB 68.8736%-113 - C3 -4MBJ 4.3 BRAF_HUMAN
43 PsiBlast_CBE 68.6936%-104 - C3 -3TV6 6.5
16 PsiBlast_PDB 68.5536%-104 - C3 -3PRI 7.9 BRAF_HUMAN
65 PsiBlast_CBE 68.5336%-100 - C3 -1UWJ 3.6
8 PsiBlast_PDB 68.1136%-103 - C3 -3II5 4.4 BRAF_HUMAN
46 PsiBlast_CBE 67.9336%-102 - C3 -3SKC 6.3
68 PsiBlast_CBE 67.0734%-103 - C3 -3OMV 5.5 RAF1_HUMAN
45 PsiBlast_CBE 66.8136%-102 - C3 -3TV4 6.1
67 PsiBlast_CBE 66.1134%-107 - C3 -3OMV 6.6
69 PsiBlast_CBE 65.3131%-102 - C3 -3P86 5.7 CTR1_ARATH