@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LIMK1_HUMAN: (2015-10-11 )
MRLTLLCCTWREERMGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWARYGESCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEHSKLYCGHCYYQTVVTPVIEQILPDSPGSHLPHTVTLVSIPASSHGKRGLSVSIDPPHGPPGCGTEHSHTVRVQGVDPGCMSPDVKNSIHVGDRILEINGTPIRNVPLDEIDLLIQETSRLLQLTLEHDPHDTLGHGLGPETSPLSSPAYTPSGEAGSSARQKPVLRSCSIDRSPGAGSLGSPASQRKDLGRSESLRVVCRPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPLGPQLEQLDRGFWETYRRGESGLPAHPEVPD

Atome Classification :

(69 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

STI_A_3(4BKJ)
DDR1_HUMAN
[Raw transfer]




STI_A_2(4CSV)
?
[Raw transfer]




STU_B_16(3S95)

[Raw transfer]




G6G_B_5(3G6G)
SRC_CHICK
[Raw transfer]




NG7_A_3(4AGW)
SRC_CHICK
[Raw transfer]




STI_B_6(3OEZ)
SRC_CHICK
[Raw transfer]




PD3_A_2(3EL7)
SRC_CHICK
[Raw transfer]




STU_A_3(3S95)
LIMK1_HUMAN
[Raw transfer]




STU_A_3(3S95)
LIMK1_HUMAN
[Raw transfer]




AQB_B_4(3TZ7)
SRC_CHICK
[Raw transfer]




PD5_A_3(3QLF)
SRC_CHICK
[Raw transfer]




046_A_2(3UGC)

[Raw transfer]




PD5_A_3(3EL8)
SRC_CHICK
[Raw transfer]




G6G_A_3(3G6G)
SRC_CHICK
[Raw transfer]




GOL_B_9(4LUE)
HCK_HUMAN
[Raw transfer]




08L_A_9(3U4W)

[Raw transfer]




NG7_B_6(4AGW)
SRC_CHICK
[Raw transfer]




ANP_B_2(2SRC)
SRC_HUMAN
[Raw transfer]




I76_A_3(4DGG)
SRC_CHICK
[Raw transfer]




AQU_B_4(3TZ9)
SRC_CHICK
[Raw transfer]




AQM_B_4(3TZ8)
SRC_CHICK
[Raw transfer]




STI_A_3(3OEZ)
SRC_CHICK
[Raw transfer]




KS1_B_4(3EN4)
SRC_CHICK
[Raw transfer]




AQM_A_3(3TZ8)
SRC_CHICK
[Raw transfer]




35H_A_3(4TPT)
LIMK2_HUMAN
[Raw transfer]




B96_A_2(4TWN)

[Raw transfer]




GOL_A_6(4LUE)
HCK_HUMAN
[Raw transfer]




1N1_B_5(3G5D)
SRC_CHICK
[Raw transfer]




AQU_A_3(3TZ9)
SRC_CHICK
[Raw transfer]




BK5_B_4(3UQF)
SRC_CHICK
[Raw transfer]




IHH_C_7(3F6X)
SRC_CHICK
[Raw transfer]




MPZ_G_7(1Y57)
SRC_HUMAN
[Raw transfer]




AQB_A_3(3TZ7)
SRC_CHICK
[Raw transfer]




BK5_A_3(3UQF)
SRC_CHICK
[Raw transfer]




I76_B_4(4DGG)
SRC_CHICK
[Raw transfer]




IFC_A_2(3DZQ)

[Raw transfer]




V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]




1BU_B_4(3F3V)
SRC_CHICK
[Raw transfer]




11V_A_3(4O2P)
SRC_CHICK
[Raw transfer]




1N1_B_4(3QLG)
SRC_CHICK
[Raw transfer]




1AW_A_3(3F3U)
SRC_CHICK
[Raw transfer]




1BU_A_3(3F3V)
SRC_CHICK
[Raw transfer]




IHH_B_6(3F6X)
SRC_CHICK
[Raw transfer]




L0I_A_3(2W1I)
JAK2_HUMAN
[Raw transfer]




08X_B_4(3U51)

[Raw transfer]




11V_B_4(4O2P)
SRC_CHICK
[Raw transfer]




RXT_A_3(4U5J)
SRC_CHICK
[Raw transfer]




35H_B_4(4TPT)

[Raw transfer]




H8H_A_2(2H8H)
SRC_HUMAN
[Raw transfer]




29K_A_3(4MCV)
SRC_CHICK
[Raw transfer]




VSE_B_10(4LUE)
HCK_HUMAN
[Raw transfer]




29K_B_4(4MCV)
SRC_CHICK
[Raw transfer]




VSE_A_4(4LUE)
HCK_HUMAN
[Raw transfer]




1AU_A_3(3F3T)
SRC_CHICK
[Raw transfer]




STU_B_3(3D7T)
SRC_CHICK
[Raw transfer]




P01_A_3(1YOM)
SRC_HUMAN
[Raw transfer]




1AW_B_5(3F3U)
SRC_CHICK
[Raw transfer]




KS1_A_3(3EN4)
SRC_CHICK
[Raw transfer]




RXT_B_4(4U5J)
SRC_CHICK
[Raw transfer]




08X_A_3(3U51)
SRC_CHICK
[Raw transfer]




IHH_D_8(3F6X)
SRC_CHICK
[Raw transfer]




AMP_A_3(3DQX)
SRC_CHICK
[Raw transfer]




PP2_B_4(3GEQ)
SRC_CHICK
[Raw transfer]




AMP_B_4(3DQX)
SRC_CHICK
[Raw transfer]




IZA_A_2(3LXL)

[Raw transfer]




1HX_A_3(4ITJ)
RIPK1_HUMAN
[Raw transfer]




ACP_A_2(4UEU)
?
[Raw transfer]




B5A_A_3(3UQG)
SRC_CHICK
[Raw transfer]




HET_B_2(2BDJ)
SRC_HUMAN
[Raw transfer]




DB8_A_3(4MXO)
SRC_HUMAN
[Raw transfer]




STU_B_2(1BYG)
CSK_HUMAN
[Raw transfer]




24A_D_4(2BDF)
SRC_HUMAN
[Raw transfer]




24A_C_3(2BDF)
SRC_HUMAN
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




112 HHSearch 94.22100%-132 - C3 -3S95 8.5 LIMK1_HUMAN
1 PsiBlast_PDB 94.22100%-132 - C3 -3S95 8.5 LIMK1_HUMAN
21 PsiBlast_CBE 92.54100%-129 - C3 -3S95 9.0
2 PsiBlast_PDB 86.8168%-137 - C3 -4TPT 8.5 LIMK2_HUMAN
22 PsiBlast_CBE 86.2068%-142 - C3 -4TPT 8.7
31 PsiBlast_CBE 59.7234%-110 - C3 -4DGG 6.8 SRC_CHICK
100 PsiBlast_CBE 58.9733%-116 - C3 -4LUE 8.3 HCK_HUMAN
47 PsiBlast_CBE 58.6634%-106 - C3 -3EN4 5.8 SRC_CHICK
49 PsiBlast_CBE 58.3334% -99 - C3 -3EL8 6.4 SRC_CHICK
51 PsiBlast_CBE 58.3234%-107 - C3 -3DQX 5.0 SRC_CHICK
38 PsiBlast_CBE 57.9134%-107 - C3 -3UQF 5.8 SRC_CHICK
122 HHSearch 57.7930%-101 - C3 -3LXL 5.6
55 PsiBlast_CBE 57.7834%-107 - C3 -3U51 8.1
36 PsiBlast_CBE 57.5534%-107 - C3 -3UQG 3.9 SRC_CHICK
56 PsiBlast_CBE 57.3634%-107 - C3 -3U51 8.2 SRC_CHICK
98 PsiBlast_CBE 57.1834%-102 - C3 -4MCV 6.1 SRC_CHICK
33 PsiBlast_CBE 57.1834%-101 - C3 -4AGW 5.4 SRC_CHICK
130 HHSearch 57.1630%-100 - C3 -2W1I 4.9 JAK2_HUMAN
65 PsiBlast_CBE 56.9134%-107 - C3 -3QLF 7.1 SRC_CHICK
34 PsiBlast_CBE 56.7934%-103 - C3 -4AGW 5.9 SRC_CHICK
26 PsiBlast_CBE 56.6334%-103 - C3 -4U5J 4.7 SRC_CHICK
32 PsiBlast_CBE 56.5834%-103 - C3 -4DGG 6.1 SRC_CHICK
37 PsiBlast_CBE 56.5634%-109 - C3 -3UQF 5.0 SRC_CHICK
61 PsiBlast_CBE 56.5134%-106 - C3 -4MXO 3.1 SRC_HUMAN
13 PsiBlast_PDB 56.5030%-111 - C3 -3DZQ 8.5
42 PsiBlast_CBE 56.4034%-104 - C3 -3F6X 5.4 SRC_CHICK
101 PsiBlast_CBE 56.3833%-113 - C3 -4LUE 8.5 HCK_HUMAN
28 PsiBlast_CBE 56.2734%-103 - C3 -4O2P 5.7 SRC_CHICK
67 PsiBlast_CBE 56.1734% -99 - C3 -3OEZ 6.3 SRC_CHICK
53 PsiBlast_CBE 56.0234% -98 - C3 -3D7T 6.3 SRC_CHICK
97 PsiBlast_CBE 55.8034%-106 - C3 -4MCV 6.9 SRC_CHICK
52 PsiBlast_CBE 55.6434% -99 - C3 -3DQX 5.0 SRC_CHICK
79 PsiBlast_CBE 55.6334%-102 - C3 -3G5D 4.9 SRC_CHICK
59 PsiBlast_CBE 55.6334%-102 - C3 -1Y57 5.9 SRC_HUMAN
66 PsiBlast_CBE 55.5334% -92 - C3 -3OEZ 7.5 SRC_CHICK
63 PsiBlast_CBE 55.3734% -98 - C3 -3QLG 6.0 SRC_CHICK
70 PsiBlast_CBE 55.1834%-100 - C3 -2BDF 4.5 SRC_HUMAN
41 PsiBlast_CBE 55.1434% -99 - C3 -3F6X 4.9 SRC_CHICK
57 PsiBlast_CBE 55.1234% -97 - C3 -3U4W 9.9
69 PsiBlast_CBE 54.8334%-104 - C3 -2BDF 5.0 SRC_HUMAN
48 PsiBlast_CBE 54.7734%-102 - C3 -3EN4 5.5 SRC_CHICK
40 PsiBlast_CBE 54.6734% -97 - C3 -3G6G 9.6 SRC_CHICK
68 PsiBlast_CBE 54.4434% -96 - C3 -2BDJ 8.6 SRC_HUMAN
75 PsiBlast_CBE 54.2934%-101 - C3 -3TZ8 8.7 SRC_CHICK
80 PsiBlast_CBE 54.2834% -96 - C3 -3F3V 8.2 SRC_CHICK
19 PsiBlast_PDB 54.2130%-104 - C3 -4TWN 10.7
83 PsiBlast_CBE 54.1834%-101 - C3 -3F3U 6.5 SRC_CHICK
27 PsiBlast_CBE 53.9834%-103 - C3 -4O2P 5.2 SRC_CHICK
82 PsiBlast_CBE 53.8334% -99 - C3 -3F3U 6.0 SRC_CHICK
121 HHSearch 53.8031% -94 - C3 -4BKJ 9.5 DDR1_HUMAN
50 PsiBlast_CBE 53.6834%-100 - C3 -3EL7 6.7 SRC_CHICK
58 PsiBlast_CBE 53.6334%-101 - C3 -3GEQ 4.6 SRC_CHICK
43 PsiBlast_CBE 53.4734%-102 - C3 -3F6X 4.7 SRC_CHICK
73 PsiBlast_CBE 53.2834%-102 - C3 -3TZ9 9.2 SRC_CHICK
84 PsiBlast_CBE 53.2534% -98 - C3 -3F3T 7.7 SRC_CHICK
114 HHSearch 53.1230%-109 - C3 -3UGC 9.9
81 PsiBlast_CBE 52.6534% -98 - C3 -3F3V 8.8 SRC_CHICK
62 PsiBlast_CBE 52.5934% -94 - C3 -2SRC 4.9 SRC_HUMAN
74 PsiBlast_CBE 52.4934%-102 - C3 -3TZ9 8.5 SRC_CHICK
25 PsiBlast_CBE 52.4434%-101 - C3 -4U5J 5.2 SRC_CHICK
95 PsiBlast_CBE 52.0634%-100 - C3 -1YOM 5.8 SRC_HUMAN
76 PsiBlast_CBE 52.0434% -98 - C3 -3TZ8 8.9 SRC_CHICK
77 PsiBlast_CBE 51.9334% -96 - C3 -3TZ7 8.6 SRC_CHICK
24 PsiBlast_CBE 51.8734% -94 - C3 -2H8H 5.5 SRC_HUMAN
78 PsiBlast_CBE 51.7234% -98 - C3 -3TZ7 6.4 SRC_CHICK
105 Fugue 51.7031%-106 - C3 -1BYG 4.9 CSK_HUMAN
39 PsiBlast_CBE 51.5934% -97 - C3 -3G6G 10.4 SRC_CHICK
8 PsiBlast_PDB 48.3434% -96 - C3 -4CSV 8.8 ?
7 PsiBlast_PDB 47.5734% -88 - C3 -4UEU 4.2 ?