@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LIMK2_HUMAN: (2015-10-11 )
MSALAGEDVWRCPGCGDHIAPSQIWYRTVNETWHGSCFRCSECQDSLTNWYYEKDGKLYCPKDYWGKFGEFCHGCSLLMTGPFMVAGEFKYHPECFACMSCKVIIEDGDAYALVQHATLYCGKCHNEVVLAPMFERLSTESVQEQLPYSVTLISMPATTEGRRGFSVSVESACSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAISQTSQTLQLLIEHDPVSQRLDQLRLEARLAPHMQNAGHPHALSTLDTKENLEGTLRRRSLRRSNSISKSPGPSSPKEPLLFSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQAIKVTHKATGKVMVMKELIRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMDPFPWQQKVRFAKGIASGMAYLHSMCIIHRDLNSHNCLIKLDKTVVVADFGLSRLIVEERKRAPMEKATTKKRTLRKNDRKKRYTVVGNPYWMAPEMLNGKSYDETVDIFSFGIVLCEIIGQVYADPDCLPRTLDFGLNVKLFWEKFVPTDCPPAFFPLAAICCRLEPESRPAFSKLEDSFEALSLYLGELGIPLPAELEELDHTVSMQYGLTRDSPP

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

STI_A_3(4BKJ)
DDR1_HUMAN
[Raw transfer]



STI_A_2(4CSV)
?
[Raw transfer]



046_A_2(3UGC)

[Raw transfer]



STU_B_16(3S95)

[Raw transfer]



ANP_A_4(3FXX)

[Raw transfer]



STU_A_3(3S95)
LIMK1_HUMAN
[Raw transfer]



Q1A_A_4(4NEU)
RIPK1_HUMAN
[Raw transfer]



STU_A_3(3S95)
LIMK1_HUMAN
[Raw transfer]



FMT_A_10(4CKJ)

[Raw transfer]



C07_A_2(4G2F)

[Raw transfer]



B96_A_2(4TWN)

[Raw transfer]



ANP_A_3(2QO9)

[Raw transfer]



35H_A_3(4TPT)
LIMK2_HUMAN
[Raw transfer]



IFC_A_2(3DZQ)

[Raw transfer]



37W_A_2(4TWO)

[Raw transfer]



ANP_A_5(2QOC)

[Raw transfer]



35H_B_4(4TPT)

[Raw transfer]



ADN_A_2(4CKJ)

[Raw transfer]



STU_A_3(3CBL)

[Raw transfer]



25Q_A_2(4P4C)

[Raw transfer]



V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]



ACP_A_2(4UEU)
?
[Raw transfer]



IZA_A_2(3LXL)

[Raw transfer]



1HX_A_3(4ITJ)
RIPK1_HUMAN
[Raw transfer]



STU_B_2(1BYG)
CSK_HUMAN
[Raw transfer]
21 PsiBlast_CBE 98.82100%-146 - C3 -4TPT 8.7
1 PsiBlast_PDB 97.48100%-139 - C3 -4TPT 8.4 LIMK2_HUMAN
2 PsiBlast_PDB 85.7767%-127 - C3 -3S95 8.5 LIMK1_HUMAN
41 HHSearch 85.7067%-126 - C3 -3S95 8.5 LIMK1_HUMAN
22 PsiBlast_CBE 84.2067%-122 - C3 -3S95 9.0
55 HHSearch 65.2031%-104 - C3 -3CBL 5.6
45 HHSearch 62.5830%-101 - C3 -4ITJ 5.6 RIPK1_HUMAN
48 HHSearch 61.7930% -87 - C3 -4BKJ 9.9 DDR1_HUMAN
7 PsiBlast_PDB 60.5130%-105 - C3 -2QOC 5.0
17 PsiBlast_PDB 60.4330%-104 - C3 -3FXX 4.5
12 PsiBlast_PDB 60.4230%-107 - C3 -4P4C 4.5
56 HHSearch 59.8432% -91 - C3 -4CKJ 4.0
14 PsiBlast_PDB 59.4930%-104 - C3 -4TWO 5.3
8 PsiBlast_PDB 59.4830%-107 - C3 -3DZQ 8.6
9 PsiBlast_PDB 59.2830%-106 - C3 -4G2F 6.1
61 HHSearch 59.0630% -93 - C3 -4NEU 7.7 RIPK1_HUMAN
6 PsiBlast_PDB 59.0030%-105 - C3 -2QO9 4.3
13 PsiBlast_PDB 58.3930%-101 - C3 -4TWN 11.2
33 Fugue 57.8230% -98 - C3 -1BYG 4.9 CSK_HUMAN
24 PsiBlast_CBE 54.7831% -96 - C3 -4CSV 8.8 ?
23 PsiBlast_CBE 54.3831% -90 - C3 -4UEU 4.0 ?