@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LMTK2_HUMAN: (2015-10-11 )
MPGPPALRRRLLLLLLVLLIAGSAGAAPLPQTGAGEAPPAAEVSSSFVILCVCSLIILIVLIANCVSCCKDPEIDFKEFEDNFDDEIDFTPPAEDTPSVQSPAEVFTLSVPNISLPAPSQFQPSVEGLKSQVARHSLNYIQEIGNGWFGKVLLGEIYTGTSVARVIVKELKASANPKEQDTFLKNGEPYYILQHPNILQCVGQCVEAIPYLLVFEFCDLGDLKAYLRSEQEHMRGDSQTMLLQRMACEVAAGLAAMHKLHFLHSDLALRNCFLTSDLNVKVGDYGIGFSRYKEDYIETDDKKVFPLRWTAPELVTSFQDRLLTADQTKYSNIWSLGVTLWELFDNAAQPYSNLSNLDVLNQVIRERDTKLPKPQLEQPYSDRWYEVLQFCWLSPEKRPAAEDVHRLLTYLRLQSQRDSEVDFEQQWNALKPNTNSRDSSNNAAFPILDHFARDRLGREMEEVLTVTETSQGLSFEYVWEAAKHDHFDERSRGHLDEGLSYTSIFYPVEVFESSLSDPGPGKQDDSGQDVPLRVPGVVPVFDAHNLSVGSDYYIQLEEKSGSNLELDYPPALLTTDMDNPERTGPELSQLTALRSVELEESSTDEDFFQSSTDPKDSSLPGDLHVTSGPESPFNNIFNDVDKSEDLPSHQKIFDLMELNGVQADFKPATLSSSLDNPKESVITGHFEKEKPRKIFDSEPLCLSDNLMHQDNFDPLNVQELSENFLFLQEKNLLKGSLSSKEHINDLQTELKNAGFTEAMLETSCRNSLDTELQFAENKPGLSLLQENVSTKGDDTDVMLTGDTLSTSLQSSPEVQVPPTSFETEETPRRVPPDSLPTQGETQPTCLDVIVPEDCLHQDISPDAVTVPVEILSTDARTHSLDNRSQDSPGESEETLRLTESDSVLADDILASRVSVGSSLPELGQELHNKPFSEDHHSHRRLEKNLEAVETLNQLNSKDAAKEAGLVSALSSDSTSQDSLLEDSLSAPFPASEPSLETPDSLESVDVHEALLDSLGSHTPQKLVPPDKPADSGYETENLESPEWTLHPAPEGTADSEPATTGDGGHSGLPPNPVIVISDAGDGHRGTEVTPETFTAGSQGSYRDSAYFSDNDSEPEKRSEEVPGTSPSALVLVQEQPLPEPVLPEQSPAAQDSCLEARKSQPDESCLSALHNSSDLELRATPEPAQTGVPQQVHPTEDEASSPWSVLNAELSSGDDFETQDDRPCTLASTGTNTNELLAYTNSALDKSLSSHSEGPKLKEPDIEGKYLGKLGVSGMLDLSEDGMDADEEDENSDDSDEDLRAFNLHSLSSESEDETEHPVPIILSNEDGRHLRSLLKPTAANAPDPLPEDWKKEKKAVTFFDDVTVYLFDQETPTKELGPCGGEACGPDLSGPAPASGSPYLSRCINSESSTDEEGGGFEWDDDFSPDPFMSKTTSNLLSSKPSLQTSKYFSPPPPARSTEQSWPHSAPYSRFSISPANIASFSLTHLTDSDIEQGGSSEDGEKD

Atome Classification :

(70 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(3T9T)

[Raw transfer]




0F2_B_5(3V5J)

[Raw transfer]




PQC_A_3(3QGY)
ITK_HUMAN
[Raw transfer]




0G1_A_5(3V5L)
ITK_HUMAN
[Raw transfer]




614_A_2(3MJ1)

[Raw transfer]




0G1_C_8(3V5L)
ITK_HUMAN
[Raw transfer]




GOL_A_8(4YNE)

[Raw transfer]




0F2_A_3(3V5J)
ITK_HUMAN
[Raw transfer]




2VT_B_6(4PP9)

[Raw transfer]




G5K_B_6(4KIO)
ITK_HUMAN
[Raw transfer]




ADP_A_3(4M15)

[Raw transfer]




0G1_D_9(3V5L)

[Raw transfer]




MJG_A_2(3MJ2)

[Raw transfer]




2VT_A_5(4PP9)
ITK_HUMAN
[Raw transfer]




2W6_A_2(4PQN)

[Raw transfer]




GS2_A_2(3EKK)

[Raw transfer]




STU_D_4(1SM2)

[Raw transfer]




PQC_A_3(3QGW)
ITK_HUMAN
[Raw transfer]




G6K_C_7(4KIO)
ITK_HUMAN
[Raw transfer]




L7A_B_4(3QGW)

[Raw transfer]




G5K_A_5(4KIO)
ITK_HUMAN
[Raw transfer]




M0Y_A_2(4M0Y)

[Raw transfer]




13L_A_2(4HCU)

[Raw transfer]




STU_C_3(1SM2)
ITK_HUMAN
[Raw transfer]




L7O_B_4(3QGY)

[Raw transfer]




2VV_A_3(4PPB)
ITK_HUMAN
[Raw transfer]




STU_D_4(1SNU)

[Raw transfer]




31W_A_2(4PMP)

[Raw transfer]




18R_A_2(4HCT)

[Raw transfer]




STU_C_3(1SNU)
ITK_HUMAN
[Raw transfer]




MUJ_A_2(4AT5)

[Raw transfer]




13J_A_2(4HCV)

[Raw transfer]




GS3_A_2(3EKN)

[Raw transfer]




31Y_A_2(4PMT)

[Raw transfer]




29Y_A_3(4MF1)
ITK_HUMAN
[Raw transfer]




2VU_A_3(4PPA)
ITK_HUMAN
[Raw transfer]




IAQ_A_2(3T9T)

[Raw transfer]




1N1_A_3(3SXR)
BMX_HUMAN
[Raw transfer]




3P6_A_2(4RFM)

[Raw transfer]




2VW_A_3(4PPC)
ITK_HUMAN
[Raw transfer]




29Y_B_4(4MF1)

[Raw transfer]




G7K_A_3(4L7S)
ITK_HUMAN
[Raw transfer]




G7K_B_4(4L7S)

[Raw transfer]




V4Z_C_10(4AOJ)

[Raw transfer]




ACP_A_2(4XLV)
?
[Raw transfer]




STI_A_2(4CSV)
?
[Raw transfer]




V4Z_B_7(4AOJ)
NTRK1_HUMAN
[Raw transfer]




LTI_A_2(4AT3)

[Raw transfer]




ACP_A_3(1I44)

[Raw transfer]




0G2_A_3(3V8W)
ITK_HUMAN
[Raw transfer]




477_B_4(3V8T)

[Raw transfer]




477_A_3(3V8T)
ITK_HUMAN
[Raw transfer]




ACP_A_2(4UEU)
?
[Raw transfer]




0G2_B_5(3V8W)

[Raw transfer]




V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]




1N1_B_5(3SXR)

[Raw transfer]




QWS_A_2(4M14)

[Raw transfer]




4F6_A_2(4YPS)

[Raw transfer]




5P8_A_2(4UXL)

[Raw transfer]




4EK_A_2(4YNE)

[Raw transfer]




T6E_A_2(4AT4)

[Raw transfer]




29Z_A_3(4MF0)
ITK_HUMAN
[Raw transfer]




PP2_A_2(3SXS)

[Raw transfer]




VGH_A_2(3ZBF)

[Raw transfer]




M0Z_A_2(4M0Z)

[Raw transfer]




1YZ_A_2(4M12)

[Raw transfer]




1E0_A_2(4M13)

[Raw transfer]




QWS_A_2(4M15)

[Raw transfer]




G6K_C_7(4KIO)
ITK_HUMAN
[Raw transfer]




G6K_D_12(4KIO)
ITK_HUMAN
[Raw transfer]




G5K_A_5(4KIO)
ITK_HUMAN
[Raw transfer]




4 PsiBlast_PDB 91.7032% -84 - C1 -4PMP 6.3
10 PsiBlast_PDB 90.9732% -89 - C1 -4AOJ 4.8 NTRK1_HUMAN
3 PsiBlast_PDB 89.7234% -78 - C1 -4AT5 6.5
21 PsiBlast_CBE 89.4132% -85 - C1 -4AOJ 4.6
22 PsiBlast_CBE 89.2132% -86 - C1 -4AOJ 4.0 NTRK1_HUMAN
94 PsiBlast_CBE 88.5031% -82 - C1 -3SXS 3.3
15 PsiBlast_PDB 88.4234% -80 - C1 -3EKN 5.3
1 PsiBlast_PDB 88.4134% -81 - C1 -4AT3 4.2
14 PsiBlast_PDB 88.3134% -87 - C1 -3EKK 5.5
27 PsiBlast_CBE 87.4533% -80 - C1 -3ZBF 5.4
2 PsiBlast_PDB 87.0034% -78 - C1 -4AT4 7.6
95 PsiBlast_CBE 86.3931% -84 - C1 -3SXR 4.3
96 PsiBlast_CBE 85.9831% -85 - C1 -3SXR 4.2 BMX_HUMAN
84 PsiBlast_CBE 85.4633% -79 - C1 -4CSV 5.9 ?
17 PsiBlast_PDB 85.3234% -85 - C1 -1I44 5.2
26 PsiBlast_CBE 85.1733% -81 - C1 -4UXL 3.9
6 PsiBlast_PDB 84.9432% -84 - C1 -4YNE 6.8
5 PsiBlast_PDB 83.9432% -82 - C1 -4PMT 5.7
46 PsiBlast_CBE 83.7634% -77 - C1 -3QGW 4.9
7 PsiBlast_PDB 83.3032% -81 - C1 -4YPS 7.1
47 PsiBlast_CBE 80.6834% -76 - C1 -3QGW 5.9 ITK_HUMAN
44 PsiBlast_CBE 80.5134% -69 - C1 -3QGY 5.2
45 PsiBlast_CBE 80.2034% -77 - C1 -3QGY 6.5 ITK_HUMAN
83 PsiBlast_CBE 79.4733% -69 - C1 -4UEU 3.4 ?
66 PsiBlast_CBE 79.1634% -66 - C1 -4L7S 8.0 ITK_HUMAN
76 PsiBlast_CBE 79.1033% -71 - C1 -3V8T 6.1
65 PsiBlast_CBE 79.0834% -67 - C1 -4L7S 7.7
61 PsiBlast_CBE 79.0434% -68 - C1 -4PP9 6.7
62 PsiBlast_CBE 78.4534% -69 - C1 -4PP9 6.4 ITK_HUMAN
69 PsiBlast_CBE 78.3734% -70 - C1 -4KIO 6.0 ITK_HUMAN
75 PsiBlast_CBE 78.3033% -67 - C1 -3V8W 6.2 ITK_HUMAN
82 PsiBlast_CBE 78.2233% -73 - C1 -3V5J 6.6 ITK_HUMAN
68 PsiBlast_CBE 77.9034% -73 - C1 -4KIO 5.8 ITK_HUMAN
79 PsiBlast_CBE 77.6133% -72 - C1 -3V5L 7.3 ITK_HUMAN
80 PsiBlast_CBE 77.4833% -70 - C1 -3V5L 7.4 ITK_HUMAN
81 PsiBlast_CBE 77.4733% -72 - C1 -3V5J 6.3
77 PsiBlast_CBE 77.3933% -70 - C1 -3V8T 5.8 ITK_HUMAN
86 PsiBlast_CBE 77.1933% -64 - C1 -4M14 4.1
78 PsiBlast_CBE 77.1433% -74 - C1 -3V5L 7.4
74 PsiBlast_CBE 77.1333% -67 - C1 -3V8W 2.7
70 PsiBlast_CBE 76.9833% -73 - C1 -1SNU 5.3
87 PsiBlast_CBE 76.3933% -65 - C1 -4M13 8.6
89 PsiBlast_CBE 76.3833% -67 - C1 -4M0Z 6.9
73 PsiBlast_CBE 76.3233% -67 - C1 -1SM2 4.8 ITK_HUMAN
97 PsiBlast_CBE 76.0933% -67 - C1 -3T9T 4.6
88 PsiBlast_CBE 75.9933% -63 - C1 -4M12 7.8
48 PsiBlast_CBE 75.9433% -77 - C1 -4RFM 8.5
52 PsiBlast_CBE 75.8433% -63 - C1 -3MJ2 4.6
51 PsiBlast_CBE 75.7033% -67 - C1 -4MF1 4.9 ITK_HUMAN
90 PsiBlast_CBE 75.6233% -64 - C1 -4M0Y 4.3
53 PsiBlast_CBE 75.5033% -74 - C1 -3MJ1 6.5
67 PsiBlast_CBE 75.3534% -68 - C1 -4KIO 5.2 ITK_HUMAN
85 PsiBlast_CBE 75.1333% -64 - C1 -4M15 7.3
91 PsiBlast_CBE 74.9233% -60 - C1 -4HCV 6.8
71 PsiBlast_CBE 74.8933% -65 * C1 *1SNU 5.9 ITK_HUMAN
50 PsiBlast_CBE 74.1533% -67 - C1 -4MF1 6.2
72 PsiBlast_CBE 73.4033% -74 - C1 -1SM2 4.8
93 PsiBlast_CBE 72.9333% -65 - C1 -4HCT 7.8
49 PsiBlast_CBE 72.0833% -66 - C1 -4PQN 7.1
92 PsiBlast_CBE 70.9933% -66 - C1 -4HCU 9.0
56 PsiBlast_CBE 68.4534% -78 - C1 -4PPC 4.8 ITK_HUMAN
64 PsiBlast_CBE 66.6634% -71 - C1 -4MF0 5.7 ITK_HUMAN
54 PsiBlast_CBE 65.7734% -68 - C1 -4QD6 -
63 PsiBlast_CBE 63.1434% -68 - C1 -4MF0 -
60 PsiBlast_CBE 62.9634% -74 - C1 -4PPA 5.5 ITK_HUMAN
58 PsiBlast_CBE 62.4834% -72 - C1 -4PPB 5.6 ITK_HUMAN
20 PsiBlast_PDB 62.4533% -51 - C1 -4XLV 5.7 ?
55 PsiBlast_CBE 62.0634% -69 - C1 -4PPC -
59 PsiBlast_CBE 61.3534% -71 - C1 -4PPA -
57 PsiBlast_CBE 60.9134% -68 - C1 -4PPB -