@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : M3K4_HUMAN: (2015-10-12 )
MREAAAALVPPPAFAVTPAAAMEEPPPPPPPPPPPPEPETESEPECCLAARQEGTLGDSACKSPESDLEDFSDETNTENLYGTSPPSTPRQMKRMSTKHQRNNVGRPASRSNLKEKMNAPNQPPHKDTGKTVENVEEYSYKQEKKIRAALRTTERDRKKNVQCSFMLDSVGGSLPKKSIPDVDLNKPYLSLGCSNAKLPVSVPMPIARPARQTSRTDCPADRLKFFETLRLLLKLTSVSKKKDREQRGQENTSGFWLNRSNELIWLELQAWHAGRTINDQDFFLYTARQAIPDIINEILTFKVDYGSFAFVRDRAGFNGTSVEGQCKATPGTKIVGYSTHHEHLQRQRVSFEQVKRIMELLEYIEALYPSLQALQKDYEKYAAKDFQDRVQALCLWLNITKDLNQKLRIMGTVLGIKNLSDIGWPVFEIPSPRPSKGNEPEYEGDDTEGELKELESSTDESEEEQISDPRVPEIRQPIDNSFDIQSRDCISKKLERLESEDDSLGWGAPDWSTEAGFSRHCLTSIYRPFVDKALKQMGLRKLILRLHKLMDGSLQRARIALVKNDRPVEFSEFPDPMWGSDYVQLSRTPPSSEEKCSAVSWEELKAMDLPSFEPAFLVLCRVLLNVIHECLKLRLEQRPAGEPSLLSIKQLVRECKEVLKGGLLMKQYYQFMLQEVLEDLEKPDCNIDAFEEDLHKMLMVYFDYMRSWIQMLQQLPQASHSLKNLLEEEWNFTKEITHYIRGGEAQAGKLFCDIAGMLLKSTGSFLEFGLQESCAEFWTSADDSSASDEIRRSVIEISRALKELFHEARERASKALGFAKMLRKDLEIAAEFRLSAPVRDLLDVLKSKQYVKVQIPGLENLQMFVPDTLAEEKSIILQLLNAAAGKDCSKDSDDVLIDAYLLLTKHGDRARDSEDSWGTWEAQPVKVVPQVETVDTLRSMQVDNLLLVVMQSAHLTIQRKAFQQSIEGLMTLCQEQTSSQPVIAKALQQLKNDALELCNRISNAIDRVDHMFTSEFDAEVDESESVTLQQYYREAMIQGYNFGFEYHKEVVRLMSGEFRQKIGDKYISFARKWMNYVLTKCESGRGTRPRWATQGFDFLQAIEPAFISALPEDDFLSLQALMNECIGHVIGKPHSPVTGLYLAIHRNSPRPMKVPRCHSDPPNPHLIIPTPEGFSTRSMPSDARSHGSPAAAAAAAAAAVAASRPSPSGGDSVLPKSISSAHDTRGSSVPENDRLASIAAELQFRSLSRHSSPTEERDEPAYPRGDSSGSTRRSWELRTLISQSKDTASKLGPIEAIQKSVRLFEEKRYREMRRKNIIGQVCDTPKSYDNVMHVGLRKVTFKWQRGNKIGEGQYGKVYTCISVDTGELMAMKEIRFQPNDHKTIKETADELKIFEGIKHPNLVRYFGVELHREEMYIFMEYCDEGTLEEVSRLGLQEHVIRLYSKQITIAINVLHEHGIVHRDIKGANIFLTSSGLIKLGDFGCSVKLKNNAQTMPGEVNSTLGTAAYMAPEVITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERLSPEGKDFLSHCLESDPKMRWTASQLLDHSFVKVCTDEE

Atome Classification :

(54 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IE8_A_4(4BID)
M3K5_HUMAN
[Raw transfer]



IE8_B_6(4BID)

[Raw transfer]



X4Z_A_3(4O0R)
PAK1_HUMAN
[Raw transfer]



4T3_B_5(4ZY4)
PAK1_HUMAN
[Raw transfer]



IE4_A_3(4BIC)
M3K5_HUMAN
[Raw transfer]



4T6_B_5(4ZY6)
PAK1_HUMAN
[Raw transfer]



STU_A_3(4BF2)
M3K5_HUMAN
[Raw transfer]



ADP_B_4(4O27)
STK24_HUMAN
[Raw transfer]



IE6_B_6(4BIE)

[Raw transfer]



4T6_A_3(4ZY6)
PAK1_HUMAN
[Raw transfer]



STU_A_3(2CLQ)
M3K5_HUMAN
[Raw transfer]



4T3_A_3(4ZY4)
PAK1_HUMAN
[Raw transfer]



IEO_B_8(4BIB)

[Raw transfer]



STU_B_5(4BF2)

[Raw transfer]



IE4_A_4(4BIC)

[Raw transfer]



274_A_10(2J7T)
STK10_HUMAN
[Raw transfer]



IEO_A_3(4BIB)
M3K5_HUMAN
[Raw transfer]



4T5_B_6(4ZY5)
PAK1_HUMAN
[Raw transfer]



D15_A_4(4AGU)
CDKL1_HUMAN
[Raw transfer]



D15_C_6(4AGU)
CDKL1_HUMAN
[Raw transfer]



GVD_A_9(2UV2)
SLK_HUMAN
[Raw transfer]



STU_B_4(2CLQ)

[Raw transfer]



631_A_2(4JXF)
PLK4_HUMAN
[Raw transfer]



6UI_A_3(4USF)
?
[Raw transfer]



GW8_A_7(4AOT)
STK10_HUMAN
[Raw transfer]



4J7_A_2(4YUR)
PLK4_HUMAN
[Raw transfer]



GW8_B_10(4AOT)
STK10_HUMAN
[Raw transfer]



6UI_B_4(4USF)
?
[Raw transfer]



D15_B_5(4AGU)
CDKL1_HUMAN
[Raw transfer]



FLL_A_2(3FXZ)
?
[Raw transfer]



BH9_B_5(4BHN)

[Raw transfer]



GOL_A_4(4ZLO)
?
[Raw transfer]



ANP_A_7(3COK)
PLK4_HUMAN
[Raw transfer]



2OL_A_3(4O0T)
PAK1_HUMAN
[Raw transfer]



2K0_B_4(4P90)
PAK1_HUMAN
[Raw transfer]



XR1_A_2(4EQC)
PAK1_HUMAN
[Raw transfer]



J60_B_3(4NZW)
STK25_HUMAN
[Raw transfer]



R09_A_3(4USE)
?
[Raw transfer]



R09_B_4(4USE)
?
[Raw transfer]



DW1_A_2(3FY0)
PAK1_HUMAN
[Raw transfer]



G6I_B_6(4EQU)
STK10_HUMAN
[Raw transfer]



R09_B_4(4USD)
?
[Raw transfer]



G6I_A_3(4EQU)
STK10_HUMAN
[Raw transfer]



DB8_A_3(5AJQ)
STK10_HUMAN
[Raw transfer]



DKI_A_13(2J51)
SLK_HUMAN
[Raw transfer]



XZN_A_2(4BC6)
STK10_HUMAN
[Raw transfer]



4OR_D_9(4ZJJ)
PAK1_HUMAN
[Raw transfer]



4OR_B_6(4ZJJ)
PAK1_HUMAN
[Raw transfer]



4OR_A_5(4ZJJ)
PAK1_HUMAN
[Raw transfer]



4OR_C_7(4ZJJ)
PAK1_HUMAN
[Raw transfer]



4OQ_A_5(4ZJI)
PAK1_HUMAN
[Raw transfer]



4OQ_B_6(4ZJI)
PAK1_HUMAN
[Raw transfer]



4OQ_C_7(4ZJI)
?
[Raw transfer]



DMS_B_6(4ZY4)
PAK1_HUMAN
[Raw transfer]



4OQ_D_9(4ZJI)
?
[Raw transfer]



DMS_B_7(4ZY5)
PAK1_HUMAN
[Raw transfer]



EDO_A_3(4JXF)
PLK4_HUMAN
[Raw transfer]



4PV_A_3(4ZLO)
?
[Raw transfer]
36 PsiBlast_CBE 74.2035% -61 - C2 -4ZY5 4.9 PAK1_HUMAN
6 PsiBlast_PDB 74.1636% -66 - C2 -4USF 6.2 ?
13 PsiBlast_PDB 73.8235% -60 - C2 -3FXZ 6.8 ?
8 PsiBlast_PDB 73.4535% -61 - C2 -4ZJJ 5.2 PAK1_HUMAN
7 PsiBlast_PDB 72.0835% -61 - C2 -4ZJI 4.5 PAK1_HUMAN
50 PsiBlast_CBE 71.8634% -67 - C2 -5AJQ 5.6 STK10_HUMAN
37 PsiBlast_CBE 71.5035% -62 - C2 -4ZY4 4.7 PAK1_HUMAN
11 PsiBlast_PDB 70.6235% -59 - C2 -4EQC 8.5 PAK1_HUMAN
1 PsiBlast_PDB 70.4640% -66 - C2 -4BF2 4.4 M3K5_HUMAN
31 PsiBlast_CBE 70.2035% -62 - C2 -4ZJJ 2.8 PAK1_HUMAN
34 PsiBlast_CBE 70.1535% -61 - C2 -4ZJI 1.6 PAK1_HUMAN
25 PsiBlast_CBE 70.1040% -65 - C2 -4BIC 5.1
47 PsiBlast_CBE 70.0234% -64 - C2 -4AOT 10.4 STK10_HUMAN
23 PsiBlast_CBE 69.6740% -61 - C2 -4BIE 5.6
14 PsiBlast_PDB 69.5935% -59 - C2 -3FY0 6.3 PAK1_HUMAN
18 PsiBlast_PDB 69.2735% -58 - C2 -4O0R 7.4 PAK1_HUMAN
57 PsiBlast_CBE 68.9832% -71 * C2 *4NZW 6.6 STK25_HUMAN
22 PsiBlast_CBE 68.8140% -64 - C2 -4BF2 4.7
48 PsiBlast_CBE 68.4834% -64 - C2 -4AOT 10.6 STK10_HUMAN
3 PsiBlast_PDB 68.3440% -63 - C2 -4BIC 4.2 M3K5_HUMAN
17 PsiBlast_PDB 68.2535% -56 - C2 -4ZY6 5.7 PAK1_HUMAN
28 PsiBlast_CBE 68.0336% -57 - C2 -4USF 5.4 ?
4 PsiBlast_PDB 67.8040% -59 - C2 -4BID 6.6 M3K5_HUMAN
5 PsiBlast_PDB 67.6440% -63 - C2 -2CLQ 4.5 M3K5_HUMAN
35 PsiBlast_CBE 67.5835% -60 - C2 -4ZY6 6.2 PAK1_HUMAN
26 PsiBlast_CBE 67.3840% -60 - C2 -4BIB 4.5
56 PsiBlast_CBE 67.2131% -53 - C2 -4AGU 6.2 CDKL1_HUMAN
21 PsiBlast_CBE 67.0540% -58 - C2 -4BHN 4.1
24 PsiBlast_CBE 66.9140% -57 - C2 -4BID 6.6
16 PsiBlast_PDB 66.4035% -59 - C2 -4ZY4 4.7 PAK1_HUMAN
55 PsiBlast_CBE 66.0231% -55 - C2 -4AGU 5.9 CDKL1_HUMAN
27 PsiBlast_CBE 65.6440% -64 - C2 -2CLQ 4.5
44 PsiBlast_CBE 65.4834% -66 - C2 -4USD 7.0 ?
58 PsiBlast_CBE 65.4631% -53 - C2 -4O27 5.3 STK24_HUMAN
54 PsiBlast_CBE 65.1931% -53 - C2 -4AGU 5.9 CDKL1_HUMAN
2 PsiBlast_PDB 65.0640% -60 - C2 -4BIB 4.0 M3K5_HUMAN
19 PsiBlast_PDB 64.9335% -54 - C2 -4O0T 7.3 PAK1_HUMAN
40 PsiBlast_CBE 64.4034% -62 - C2 -4P90 6.9 PAK1_HUMAN
30 PsiBlast_CBE 63.9235% -59 - C2 -4ZJJ 2.7 PAK1_HUMAN
32 PsiBlast_CBE 63.0635% -57 - C2 -4ZJI 3.9 ?
29 PsiBlast_CBE 59.7835% -62 - C2 -4ZJJ 5.2 PAK1_HUMAN
59 PsiBlast_CBE 59.7531% -57 - C2 -3COK 6.5 PLK4_HUMAN
33 PsiBlast_CBE 58.7035% -53 - C2 -4ZJI 3.6 ?
46 PsiBlast_CBE 57.8434% -58 - C2 -4EQU 5.8 STK10_HUMAN
49 PsiBlast_CBE 57.6934% -59 - C2 -2J7T 8.2 STK10_HUMAN
45 PsiBlast_CBE 57.4934% -58 - C2 -4EQU 5.4 STK10_HUMAN
9 PsiBlast_PDB 53.2336% -51 - C2 -2J51 5.1 SLK_HUMAN
20 PsiBlast_PDB 53.1237% -49 - C2 -2UV2 5.0 SLK_HUMAN
60 PsiBlast_CBE 52.8531% -54 - C2 -4YUR 3.4 PLK4_HUMAN
61 PsiBlast_CBE 52.6231% -57 - C2 -4JXF 5.7 PLK4_HUMAN
43 PsiBlast_CBE 52.2834% -50 - C2 -4USE 7.0 ?
42 PsiBlast_CBE 50.5434% -52 - C2 -4USE 6.7 ?
51 PsiBlast_CBE 49.7334% -53 - C2 -4BC6 7.7 STK10_HUMAN
10 PsiBlast_PDB 37.8635% -23 - C2 -4ZLO 4.0 ?