@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MARK1_HUMAN: (2015-10-13 )
MSARTPLPTVNERDTENHTSVDGYTEPHIQPTKSSSRQNIPRCRNSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFNDTKRIDIMVTMGFARDEINDALINQKYDEVMATYILLGRKPPEFEGGESLSSGNLCQRSRPSSDLNNSTLQSPAHLKVQRSISANQKQRRFSDHAGPSIPPAVSYTKRPQANSVESEQKEEWDKDVARKLGSTTVGSKSEMTASPLVGPERKKSSTIPSNNVYSGGSMARRNTYVCERTTDRYVALQNGKDSSLTEMSVSSISSAGSSVASAVPSARPRHQKSMSTSGHPIKVTLPTIKDGSEAYRPGTTQRVPAASPSAHSISTATPDRTRFPRGSSSRSTFHGEQLRERRSVAYNGPPASPSHETGAFAHARRGTSTGIISKITSKFVRRDPSEGEASGRTDTSRSTSGEPKERDKEEGKDSKPRSLRFTWSMKTTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANELKL

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_4(2YEX)
CHK1_HUMAN
[Raw transfer]




710_B_2(2HOG)
CHK1_HUMAN
[Raw transfer]




M54_A_2(2R0U)
CHK1_HUMAN
[Raw transfer]




306_B_2(2HY0)
CHK1_HUMAN
[Raw transfer]




422_B_2(2HXL)
CHK1_HUMAN
[Raw transfer]




631_A_2(4JXF)
PLK4_HUMAN
[Raw transfer]




ANP_A_2(4BL1)
MELK_HUMAN
[Raw transfer]




ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




4J7_A_2(4YUR)
PLK4_HUMAN
[Raw transfer]




82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




373_B_2(2HXQ)
CHK1_HUMAN
[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




1WS_A_2(4BKZ)
MELK_HUMAN
[Raw transfer]




582_A_2(2QHN)
CHK1_HUMAN
[Raw transfer]




S25_A_3(3TKI)
CHK1_HUMAN
[Raw transfer]




S25_A_3(3TKI)
CHK1_HUMAN
[Raw transfer]




YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




7CS_A_2(2QHM)
CHK1_HUMAN
[Raw transfer]




ANP_A_7(3COK)
PLK4_HUMAN
[Raw transfer]




07S_A_3(3TKH)
CHK1_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




FS9_A_3(3WF7)
KS6B1_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




CPS_B_12(4CZT)
CIPKN_ARATH
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_B_10(4CZU)
CIPKN_ARATH
[Raw transfer]




EDO_A_5(2W5A)
NEK2_HUMAN
[Raw transfer]




EDO_A_3(4JXF)
PLK4_HUMAN
[Raw transfer]




124 HHSearch 69.1341% -91 - C2 -4BKY 7.9 MELK_HUMAN
85 PsiBlast_CBE 69.0438%-101 - C2 -3BHH 5.7 KCC2B_HUMAN
86 PsiBlast_CBE 67.7438%-101 - C2 -3BHH 6.0 KCC2B_HUMAN
24 PsiBlast_CBE 65.0340% -91 - C2 -4CZT - CIPKN_ARATH
20 PsiBlast_PDB 65.0246% -92 - C2 -3AQV 7.4 AAPK2_HUMAN
28 PsiBlast_CBE 64.4340% -90 - C2 -4CZU - CIPKN_ARATH
29 PsiBlast_CBE 63.6840% -97 - C2 -4CZU - CIPKN_ARATH
25 PsiBlast_CBE 63.4540% -96 - C2 -4CZT - CIPKN_ARATH
144 HHSearch 63.3337% -91 - C2 -3HKO 5.2 ?
84 PsiBlast_CBE 63.2938%-104 - C2 -4YUR 4.9 PLK4_HUMAN
30 PsiBlast_CBE 63.2640% -90 - C2 -4CZU 4.4 CIPKN_ARATH
136 HHSearch 63.2435% -95 - C2 -2Y0A 2.8 DAPK1_HUMAN
26 PsiBlast_CBE 63.2340% -91 - C2 -4CZT 4.8 CIPKN_ARATH
139 HHSearch 62.6135% -91 - C2 -1RDQ 6.7 KAPCA_MOUSE
102 PsiBlast_CBE 62.5438%-107 - C2 -4JXF 8.8 PLK4_HUMAN
33 PsiBlast_CBE 62.1745% -96 - C2 -4BKZ 5.7 MELK_HUMAN
31 PsiBlast_CBE 62.1540% -88 - C2 -4CZU 4.8 CIPKN_ARATH
141 HHSearch 61.0537% -97 - C2 -3TKI 6.0 CHK1_HUMAN
27 PsiBlast_CBE 60.9440% -85 - C2 -4CZT 3.9 CIPKN_ARATH
65 PsiBlast_CBE 60.4840% -92 - C2 -3MA6 5.2 ?
137 HHSearch 60.2934% -91 - C2 -3C0I 4.8 CSKP_HUMAN
32 PsiBlast_CBE 60.2445% -94 - C2 -4BL1 6.4 MELK_HUMAN
98 PsiBlast_CBE 60.0637% -89 - C2 -2HY0 6.0 CHK1_HUMAN
66 PsiBlast_CBE 60.0040% -89 - C2 -3MA6 4.5 ?
79 PsiBlast_CBE 59.8239% -87 - C2 -2WEI 6.0 ?
138 HHSearch 59.5234% -89 - C2 -3WF7 7.3 KS6B1_HUMAN
103 PsiBlast_CBE 59.4637% -89 - C2 -3TKI 6.0 CHK1_HUMAN
145 HHSearch 59.4135% -84 - C2 -1XJD 6.5
129 HHSearch 59.1437% -87 - C2 -2YEX 4.3 CHK1_HUMAN
105 PsiBlast_CBE 59.1437% -89 - C2 -2R0U 5.0 CHK1_HUMAN
89 PsiBlast_CBE 59.1438%-106 - C2 -3COK 5.9 PLK4_HUMAN
101 PsiBlast_CBE 58.8237% -90 - C2 -2HOG 5.9 CHK1_HUMAN
106 PsiBlast_CBE 58.7837% -92 - C2 -2QHN 4.1 CHK1_HUMAN
104 PsiBlast_CBE 58.6437% -93 - C2 -3TKH 4.2 CHK1_HUMAN
100 PsiBlast_CBE 58.5937% -81 - C2 -2HXL 4.7 CHK1_HUMAN
127 HHSearch 58.2832% -91 - C2 -2W5A 4.4 NEK2_HUMAN
107 PsiBlast_CBE 57.8837% -86 - C2 -2QHM 4.4 CHK1_HUMAN
99 PsiBlast_CBE 57.8337% -83 - C2 -2HXQ 4.5 CHK1_HUMAN