@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MK04_HUMAN: (2015-10-13 )
MAEKGDCIASVYGYDLGGRFVDFQPLGFGVNGLVLSAVDSRACRKVAVKKIALSDARSMKHALREIKIIRRLDHDNIVKVYEVLGPKGTDLQGELFKFSVAYIVQEYMETDLARLLEQGTLAEEHAKLFMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLARIVDQHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGRMLFAGAHELEQMQLILETIPVIREEDKDELLRVMPSFVSSTWEVKRPLRKLLPEVNSEAIDFLEKILTFNPMDRLTAEMGLQHPYMSPYSCPEDEPTSQHPFRIEDEIDDIVLMAANQSQLSNWDTCSSRYPVSLSSDLEWRPDRCQDASEVQRDPRAGSAPLAEDVQVDPRKDSHSSSERFLEQSHSSMERAFEADYGRSCDYKVGSPSYLDKLLWRDNKPHHYSEPKLILDLSHWKQAAGAPPTATGLADTGAREDEPASLFLEIAQWVKSTQGGPEHASPPADDPERRLSASPPGRPAPVDGGASPQFDLDVFISRALKLCTKPEDLPDNKLGDLNGACIPEHPGDLVQTEAFSKERW

Atome Classification :

(54 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(4FMQ)
MK01_HUMAN
[Raw transfer]




ANP_A_3(4H3Q)
MK01_HUMAN
[Raw transfer]




ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]




ADP_A_3(2F9G)
FUS3_YEAST
[Raw transfer]




Z48_A_6(3I5Z)
MK01_HUMAN
[Raw transfer]




ADP_A_3(2B9F)
FUS3_YEAST
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




EK4_A_2(4FV1)
MK01_HUMAN
[Raw transfer]




82A_A_3(2OJJ)
MK01_HUMAN
[Raw transfer]




4V8_A_2(5BUE)
?
[Raw transfer]




ATP_E_5(1UA2)
CDK7_HUMAN
[Raw transfer]




ADP_A_5(4NST)
CDK12_HUMAN
[Raw transfer]




ADP_A_4(2B9J)
FUS3_YEAST
[Raw transfer]




ANP_A_3(3TEI)
MK01_HUMAN
[Raw transfer]




38Z_A_20(4QTB)
MK03_HUMAN
[Raw transfer]




4VG_A_2(5BVE)
?
[Raw transfer]




ADP_A_4(2B9I)
FUS3_YEAST
[Raw transfer]




4VF_A_2(5BVD)
?
[Raw transfer]




E57_A_2(4FV6)
MK01_HUMAN
[Raw transfer]




33A_A_3(2OJI)
MK01_HUMAN
[Raw transfer]




ANP_D_6(4H3P)
MK01_HUMAN
[Raw transfer]




E86_A_5(3I60)
MK01_HUMAN
[Raw transfer]




41B_B_4(4XJ0)
?
[Raw transfer]




4VB_A_2(5BUJ)
?
[Raw transfer]




38Z_A_12(4QTA)
MK01_HUMAN
[Raw transfer]




EK6_A_2(4FV3)
MK01_HUMAN
[Raw transfer]




2H1_B_4(4N4S)
MK01_RAT
[Raw transfer]




4V9_A_3(5BUI)
?
[Raw transfer]




2SH_A_2(4O6E)
MK01_HUMAN
[Raw transfer]




ANP_A_5(4H3P)
MK01_HUMAN
[Raw transfer]




5ID_B_8(2ZOQ)
MK03_HUMAN
[Raw transfer]




EK7_A_2(4FV4)
MK01_HUMAN
[Raw transfer]




ATP_A_3(1GOL)
MK01_RAT
[Raw transfer]




FMT_A_13(4F6U)
CDK8_HUMAN
[Raw transfer]




5ID_A_7(2ZOQ)
MK03_HUMAN
[Raw transfer]




2H1_A_3(4N4S)
MK01_RAT
[Raw transfer]




FRZ_B_2(1TVO)
MK01_HUMAN
[Raw transfer]




TT4_A_2(4XNE)
?
[Raw transfer]




0RX_A_2(4EYM)
MK13_HUMAN
[Raw transfer]




F29_B_2(1WZY)
MK01_HUMAN
[Raw transfer]




046_A_2(4O2Z)
?
[Raw transfer]




JBI_A_2(3TTJ)
MK10_HUMAN
[Raw transfer]




337_A_2(3CTQ)
MK14_HUMAN
[Raw transfer]




G2G_A_2(2PUU)
MK14_MOUSE
[Raw transfer]




OLO_C_3(4ERK)
MK01_RAT
[Raw transfer]




P39_A_2(3BV3)
MK14_HUMAN
[Raw transfer]




P5K_A_3(3P5K)
MK14_MOUSE
[Raw transfer]




620_A_2(4XRJ)
?
[Raw transfer]




0SR_A_3(4F6U)
CDK8_HUMAN
[Raw transfer]




P79_A_3(3P79)
MK14_MOUSE
[Raw transfer]




P7B_A_2(3P7B)
MK14_MOUSE
[Raw transfer]




P7A_A_3(3P7A)
MK14_MOUSE
[Raw transfer]




P7C_A_3(3P7C)
MK14_MOUSE
[Raw transfer]




P78_A_3(3P78)
MK14_MOUSE
[Raw transfer]




SB4_B_2(3ERK)
MK01_RAT
[Raw transfer]




EDO_A_10(4NST)
CDK12_HUMAN
[Raw transfer]




12 PsiBlast_PDB 79.1742%-116 - C3 -4O6E 6.7 MK01_HUMAN
11 PsiBlast_PDB 78.9942%-120 - C3 -4FV6 6.0 MK01_HUMAN
36 PsiBlast_CBE 78.9442%-119 - C3 -5BUE 5.0 ?
5 PsiBlast_PDB 78.7142%-109 - C3 -4QTA 6.8 MK01_HUMAN
34 PsiBlast_CBE 77.9442%-118 - C3 -5BUJ 5.1 ?
16 PsiBlast_PDB 77.9242%-119 - C3 -3I60 5.3 MK01_HUMAN
20 PsiBlast_PDB 76.8942%-119 - C3 -4FV4 5.8 MK01_HUMAN
26 PsiBlast_CBE 76.4142%-106 - C3 -1TVO 3.6 MK01_HUMAN
32 PsiBlast_CBE 76.3942%-114 - C3 -5BVE 6.5 ?
42 PsiBlast_CBE 76.0741%-108 - C3 -1GOL 3.3 MK01_RAT
15 PsiBlast_PDB 76.0542%-116 - C3 -3I5Z 4.5 MK01_HUMAN
14 PsiBlast_PDB 75.9442%-104 - C3 -2OJJ 7.6 MK01_HUMAN
8 PsiBlast_PDB 75.8842%-106 - C3 -4FMQ 6.5 MK01_HUMAN
27 PsiBlast_CBE 75.8142%-108 - C3 -4ERK 5.4 MK01_RAT
28 PsiBlast_CBE 75.7542%-105 - C3 -3ERK 6.2 MK01_RAT
13 PsiBlast_PDB 75.4742%-103 - C3 -2OJI 6.6 MK01_HUMAN
33 PsiBlast_CBE 75.2442%-114 - C3 -5BVD 7.1 ?
35 PsiBlast_CBE 75.2042%-109 - C3 -5BUI 4.4 ?
18 PsiBlast_PDB 75.0242%-107 - C3 -4FV1 6.0 MK01_HUMAN
45 PsiBlast_CBE 75.0041%-108 - C3 -3TEI 4.9 MK01_HUMAN
50 PsiBlast_CBE 74.8041%-107 - C3 -4XJ0 5.7 ?
19 PsiBlast_PDB 74.6242%-104 - C3 -4FV3 6.8 MK01_HUMAN
49 PsiBlast_CBE 74.5542%-111 - C3 -2ZOQ 3.9 MK03_HUMAN
43 PsiBlast_CBE 74.4641%-110 - C3 -4H3P 4.7 MK01_HUMAN
44 PsiBlast_CBE 74.2641%-105 - C3 -4H3P 4.9 MK01_HUMAN
46 PsiBlast_CBE 73.9941%-105 - C3 -4N4S 7.3 MK01_RAT
25 PsiBlast_CBE 73.9842%-103 - C3 -1WZY 3.9 MK01_HUMAN
4 PsiBlast_PDB 73.4942%-107 - C3 -2ZOQ 4.0 MK03_HUMAN
132 HHSearch 73.2746%-107 - C3 -4QTB 6.6 MK03_HUMAN
134 HHSearch 73.0438%-113 * C3 *2B9H 4.8 FUS3_YEAST
63 PsiBlast_CBE 72.8734%-113 - C3 -2F9G 5.9 FUS3_YEAST
48 PsiBlast_CBE 72.6741%-104 - C3 -4H3Q 6.9 MK01_HUMAN
60 PsiBlast_CBE 72.5434%-109 - C3 -2B9I 4.5 FUS3_YEAST
47 PsiBlast_CBE 72.4041%-102 - C3 -4N4S 6.5 MK01_RAT
141 HHSearch 71.9139%-104 - C3 -4O2Z 7.5 ?
54 PsiBlast_CBE 71.2034%-113 - C3 -2B9F 5.2 FUS3_YEAST
59 PsiBlast_CBE 71.0034%-113 - C3 -2B9J 5.4 FUS3_YEAST
62 PsiBlast_CBE 68.3237%-110 - C3 -4EYM 7.4 MK13_HUMAN
67 PsiBlast_CBE 68.0935%-113 - C3 -3CTQ 5.5 MK14_HUMAN
73 PsiBlast_CBE 67.9235%-119 - C3 -3P79 7.4 MK14_MOUSE
75 PsiBlast_CBE 67.7835%-118 - C3 -3P5K 7.2 MK14_MOUSE
71 PsiBlast_CBE 67.3035%-117 - C3 -3P7B 8.0 MK14_MOUSE
68 PsiBlast_CBE 67.2835%-109 - C3 -2PUU 8.9 MK14_MOUSE
72 PsiBlast_CBE 67.0535%-116 - C3 -3P7A 6.7 MK14_MOUSE
114 PsiBlast_CBE 66.7935%-108 - C3 -3BV3 7.6 MK14_HUMAN
74 PsiBlast_CBE 66.2935%-120 - C3 -3P78 6.8 MK14_MOUSE
70 PsiBlast_CBE 65.9935%-118 - C3 -3P7C 7.8 MK14_MOUSE
149 HHSearch 65.7036%-114 - C3 -4NST 5.9 CDK12_HUMAN
135 HHSearch 62.3533%-106 - C3 -3TTJ 5.8 MK10_HUMAN
148 HHSearch 60.3833%-110 - C3 -4BGQ 5.3 CDKL5_HUMAN
144 HHSearch 59.4533% -99 - C3 -4F6U 8.2 CDK8_HUMAN
139 HHSearch 58.9134% -95 - C3 -1UA2 5.6 CDK7_HUMAN
2 PsiBlast_PDB 53.0842% -49 - C3 -4XNE 4.8 ?
3 PsiBlast_PDB 51.8942% -50 - C3 -4XRJ 7.5 ?