@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MKNK1_HUMAN: (2015-10-14 )
MVSSQKLEKPIEMGSSEPLPIADGDRRRKKKRRGRATDSLPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKDKVSLCHLGWSAMAPSGLTAAPTSLGSSDPPTSASQVAGTTGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQAPEKGLPTPQVLQRNSSTMDLTLFAAEAIALNRQLSQHEENELAEEPEALADGLCSMKLSPPCKSRLARRRALAQAGRGEDRSPPTAL

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]



ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



ANP_A_3(3KN5)
KS6A5_HUMAN
[Raw transfer]



ADP_A_7(2RIO)
IRE1_YEAST
[Raw transfer]



ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]



ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]



ANP_B_4(3KN5)

[Raw transfer]



STU_A_3(2HW7)
MKNK2_HUMAN
[Raw transfer]



DXR_B_4(3MA6)
?
[Raw transfer]



VGG_A_2(2WEI)
?
[Raw transfer]



DXR_A_3(3MA6)
?
[Raw transfer]



0JH_A_2(4D9U)

[Raw transfer]



0JG_A_2(4D9T)

[Raw transfer]



J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]



J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]



EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]



EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]



PEG_B_8(2WNT)

[Raw transfer]
3 PsiBlast_PDB 88.4868%-110 - C1 -2HW7 8.9 MKNK2_HUMAN
9 PsiBlast_PDB 70.0132% -88 - C1 -2WEI 6.6 ?
36 PsiBlast_CBE 66.5232% -93 - C1 -3MA6 4.2 ?
42 PsiBlast_CBE 66.1831%-107 - C1 -4FG8 3.8 KCC1A_HUMAN
35 PsiBlast_CBE 65.5632% -92 - C1 -3MA6 5.8 ?
41 PsiBlast_CBE 65.2331%-104 - C1 -4FG7 4.0 KCC1A_HUMAN
43 PsiBlast_CBE 65.1331%-111 - C1 -4FG8 4.9 KCC1A_HUMAN
14 PsiBlast_PDB 64.0731% -78 - C1 -4D9U 6.2
16 PsiBlast_PDB 62.8231% -97 - C1 -3KN5 4.2 KS6A5_HUMAN
15 PsiBlast_PDB 62.7831% -74 - C1 -4D9T 4.4
24 PsiBlast_CBE 61.6633% -86 - C1 -2WNT 2.4
40 PsiBlast_CBE 60.9231% -97 - C1 -2JAM 5.3 KCC1G_HUMAN
25 PsiBlast_CBE 60.7431% -91 - C1 -3KN5 3.9
39 PsiBlast_CBE 59.3431% -97 - C1 -2JAM 5.4 KCC1G_HUMAN