@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : MKNK2_HUMAN: (2015-10-14 )
MVQKKPAELQGFHRSFKGQNPFELAFSLDQPDHGDSDFGLQCSARPDMPASQPIDIPDAKKRGKKKKRGRATDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPTPMVLQRNSCAKDLTSFAAEAIAMNRQLAQHDEDLAEEEAAGQGQPVLVRATSRCLQLSPPSQSKLAQRRQRASLSSAPVVLVGDHA

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_4(1PHK)
PHKG1_RABIT
[Raw transfer]




STU_A_3(2HW7)
MKNK2_HUMAN
[Raw transfer]




ANP_A_3(3KN5)
KS6A5_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




B18_B_6(2PZY)
MAPK2_HUMAN
[Raw transfer]




DRK_A_2(3F3Z)
?
[Raw transfer]




ADP_B_2(1NY3)
MAPK2_HUMAN
[Raw transfer]




B18_A_5(2PZY)
MAPK2_HUMAN
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




STU_C_7(2PZY)
MAPK2_HUMAN
[Raw transfer]




STU_A_7(1NXK)
MAPK2_HUMAN
[Raw transfer]




ANP_B_4(3KN5)

[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




0JH_A_2(4D9U)

[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




B49_A_5(2Y7J)
PHKG2_HUMAN
[Raw transfer]




QUE_A_2(3LM5)
ST17B_HUMAN
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




0JG_A_2(4D9T)

[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




3 PsiBlast_PDB 92.2999%-132 - C1 -2HW7 8.7 MKNK2_HUMAN
58 PsiBlast_CBE 64.7336%-115 - C1 -3MFR 4.4 CSKP_HUMAN
130 HHSearch 63.9337%-110 - C1 -3C0I 4.8 CSKP_HUMAN
57 PsiBlast_CBE 63.9236%-115 - C1 -3MFS 3.9 CSKP_HUMAN
142 HHSearch 63.8035%-110 - C1 -1PHK 5.5 PHKG1_RABIT
56 PsiBlast_CBE 63.3036%-114 - C1 -3MFU 4.0 CSKP_HUMAN
136 HHSearch 61.3436%-107 - C1 -2Y0A 2.3 DAPK1_HUMAN
143 HHSearch 61.1735%-113 - C1 -3F3Z 5.6 ?
26 PsiBlast_CBE 61.1336%-115 - C1 -3MA6 5.9 ?
27 PsiBlast_CBE 60.4536%-115 - C1 -3MA6 4.1 ?
147 HHSearch 60.2230%-110 - C1 -3LM5 5.1 ST17B_HUMAN
34 PsiBlast_CBE 59.8632% -92 - C1 -4D9U 5.5
35 PsiBlast_CBE 59.7332% -90 - C1 -4D9T 4.4
144 HHSearch 58.9432%-105 - C1 -2X4F 6.1 MYLK4_HUMAN
52 PsiBlast_CBE 58.4936%-109 - C1 -3BHH 6.1 KCC2B_HUMAN
55 PsiBlast_CBE 58.1434%-108 - C1 -2Y7J 6.3 PHKG2_HUMAN
9 PsiBlast_PDB 58.1137% -99 - C1 -2WEI 6.6 ?
51 PsiBlast_CBE 57.9036%-110 - C1 -3BHH 6.2 KCC2B_HUMAN
60 PsiBlast_CBE 57.7634%-105 - C1 -2V7O 5.0 KCC2G_HUMAN
54 PsiBlast_CBE 57.7634%-107 - C1 -2Y7J 5.7 PHKG2_HUMAN
53 PsiBlast_CBE 57.6534%-106 - C1 -2Y7J 5.9 PHKG2_HUMAN
109 PsiBlast_CBE 57.5332%-107 - C1 -2PZY 5.9 MAPK2_HUMAN
64 PsiBlast_CBE 56.5032%-107 - C1 -1NY3 4.6 MAPK2_HUMAN
38 PsiBlast_CBE 56.2934%-107 - C1 -3KN5 4.2 KS6A5_HUMAN
110 PsiBlast_CBE 55.3432%-104 - C1 -2PZY 6.2 MAPK2_HUMAN
132 HHSearch 54.9134%-109 - C1 -1NXK 7.5 MAPK2_HUMAN
108 PsiBlast_CBE 54.8432%-103 - C1 -2PZY 7.0 MAPK2_HUMAN
40 PsiBlast_CBE 54.4738%-108 - C1 -2JAM 2.1 KCC1G_HUMAN
37 PsiBlast_CBE 53.6534% -98 - C1 -3KN5 3.9
39 PsiBlast_CBE 52.6238%-105 - C1 -2JAM 3.7 KCC1G_HUMAN