@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NEK1_HUMAN: (2015-10-15 )
MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVMPAQKITKPAAKYGIPLAYKKYGDKKLHEKKPLQKHKQAHQTPEKRVNTGEERRKISEEAARKRRLEFIEKEKKQKDQIISLMKAEQMKRQEKERLERINRAREQGWRNVLSAGGSGEVKAPFLGSGGTIAPSSFSSRGQYEHYHAIFDQMQQQRAEDNEAKWKREIYGRGLPERGILPGVRPGFPYGAAGHHHFPDADDIRKTLKRLKAVSKQANANRQKGQLAVERAKQVEEFLQRKREAMQNKARAEGHMVYLARLRQIRLQNFNERQQIKAKLRGEKKEANHSEGQEGSEEADMRRKKIESLKAHANARAAVLKEQLERKRKEAYEREKKVWEEHLVAKGVKSSDVSPPLGQHETGGSPSKQQMRSVISVTSALKEVGVDSSLTDTRETSEEMQKTNNAISSKREILRRLNENLKAQEDEKGKQNLSDTFEINVHEDAKEHEKEKSVSSDRKKWEAGGQLVIPLDELTLDTSFSTTERHTVGEVIKLGPNGSPRRAWGKSPTDSVLKILGEAELQLQTELLENTTIRSEISPEGEKYKPLITGEKKVQCISHEINPSAIVDSPVETKSPEFSEASPQMSLKLEGNLEEPDDLETEILQEPSGTNKDESLPCTITDVWISEEKETKETQSADRITIQENEVSEDGVSSTVDQLSDIHIEPGTNDSQHSKCDVDKSVQPEPFFHKVVHSEHLNLVPQVQSVQCSPEESFAFRSHSHLPPKNKNKNSLLIGLSTGLFDANNPKMLRTCSLPDLSKLFRTLMDVPTVGDVRQDNLEIDEIEDENIKEGPSDSEDIVFEETDTDLQELQASMEQLLREQPGEEYSEEEESVLKNSDVEPTANGTDVADEDDNPSSESALNEEWHSDNSDGEIASECECDSVFNHLEELRLHLEQEMGFEKFFEVYEKIKAIHEDEDENIEICSKIVQNILGNEHQHLYAKILHLVMADGAYQEDNDE

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAP_A_2(2W5B)
NEK2_HUMAN
[Raw transfer]




5R1_A_2(2XK8)
NEK2_HUMAN
[Raw transfer]




EQH_A_2(2XK6)
NEK2_HUMAN
[Raw transfer]




XK3_A_2(2XK3)
NEK2_HUMAN
[Raw transfer]




T3M_A_2(2XKD)
NEK2_HUMAN
[Raw transfer]




OL2_A_2(2XK4)
NEK2_HUMAN
[Raw transfer]




WI2_A_2(2XKE)
NEK2_HUMAN
[Raw transfer]




30E_A_2(2XK7)
NEK2_HUMAN
[Raw transfer]




VGK_A_2(2WQO)
NEK2_HUMAN
[Raw transfer]




BX1_A_2(2XKF)
NEK2_HUMAN
[Raw transfer]




CK7_B_6(4B9D)
NEK1_HUMAN
[Raw transfer]




4VQ_A_2(2XKC)
NEK2_HUMAN
[Raw transfer]




WCX_A_2(2XNP)
NEK2_HUMAN
[Raw transfer]




WGZ_A_2(2XNM)
NEK2_HUMAN
[Raw transfer]




GOL_A_14(2XNO)
NEK2_HUMAN
[Raw transfer]




GW8_A_7(4AOT)
STK10_HUMAN
[Raw transfer]




ED8_A_2(2XNO)
NEK2_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




CK7_A_3(4B9D)
NEK1_HUMAN
[Raw transfer]




ACP_A_3(2Z7Q)
KS6A1_HUMAN
[Raw transfer]




GW8_B_10(4AOT)
STK10_HUMAN
[Raw transfer]




430_A_2(2XNN)
NEK2_HUMAN
[Raw transfer]




274_A_10(2J7T)
STK10_HUMAN
[Raw transfer]




5Z5_A_2(2JAV)
NEK2_HUMAN
[Raw transfer]




ADP_A_2(2WQN)
NEK7_HUMAN
[Raw transfer]




G6I_B_6(4EQU)
STK10_HUMAN
[Raw transfer]




R09_B_4(4USD)
?
[Raw transfer]




R09_B_4(4USE)
?
[Raw transfer]




R09_A_3(4USE)
?
[Raw transfer]




DB8_A_3(5AJQ)
STK10_HUMAN
[Raw transfer]




XZN_A_2(4BC6)
STK10_HUMAN
[Raw transfer]




IQO_A_2(3O96)
AKT1_HUMAN
[Raw transfer]




0R4_A_2(4EJN)
AKT1_HUMAN
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




21 PsiBlast_CBE 93.0799%-104 - C1 -4B9D 5.6 NEK1_HUMAN
2 PsiBlast_PDB 92.4799%-105 - C1 -4B9D 5.1 NEK1_HUMAN
18 PsiBlast_PDB 68.6742% -96 - C1 -2JAV 6.6 NEK2_HUMAN
12 PsiBlast_PDB 67.4342% -91 - C1 -2XKF 6.2 NEK2_HUMAN
14 PsiBlast_PDB 67.2342% -90 - C1 -2XNM 7.7 NEK2_HUMAN
13 PsiBlast_PDB 67.0542% -95 - C1 -2XKE 6.1 NEK2_HUMAN
11 PsiBlast_PDB 67.0342% -92 - C1 -2XKD 6.8 NEK2_HUMAN
7 PsiBlast_PDB 66.1842% -87 - C1 -2XK6 6.2 NEK2_HUMAN
3 PsiBlast_PDB 65.7642% -88 - C1 -2W5A 6.0 NEK2_HUMAN
23 PsiBlast_CBE 65.7438% -95 - C1 -2WQN 3.7 NEK7_HUMAN
4 PsiBlast_PDB 65.4542% -91 - C1 -2WQO 7.3 NEK2_HUMAN
16 PsiBlast_PDB 65.2142% -86 - C1 -2XNO 5.8 NEK2_HUMAN
19 PsiBlast_PDB 64.9742% -88 - C1 -2W5B 5.6 NEK2_HUMAN
8 PsiBlast_PDB 64.0242% -88 - C1 -2XK7 6.1 NEK2_HUMAN
17 PsiBlast_PDB 63.7042% -85 - C1 -2XNP 9.2 NEK2_HUMAN
5 PsiBlast_PDB 63.2942% -86 - C1 -2XK3 5.9 NEK2_HUMAN
6 PsiBlast_PDB 62.8642% -87 - C1 -2XK4 7.2 NEK2_HUMAN
9 PsiBlast_PDB 61.7242% -90 - C1 -2XK8 7.1 NEK2_HUMAN
10 PsiBlast_PDB 61.6442% -85 - C1 -2XKC 6.7 NEK2_HUMAN
15 PsiBlast_PDB 61.3342% -84 - C1 -2XNN 6.2 NEK2_HUMAN
65 PsiBlast_CBE 50.7531% -74 - C1 -4EJN 6.3 AKT1_HUMAN
63 PsiBlast_CBE 50.5131% -66 - C1 -5AJQ 6.1 STK10_HUMAN
64 PsiBlast_CBE 48.2731% -77 - C1 -3O96 6.1 AKT1_HUMAN
62 PsiBlast_CBE 46.6331% -62 - C1 -4BC6 5.3 STK10_HUMAN
57 PsiBlast_CBE 45.6931% -62 - C1 -4USD 8.0 ?
59 PsiBlast_CBE 45.5631% -59 - C1 -4AOT 7.1 STK10_HUMAN
60 PsiBlast_CBE 45.1831% -60 - C1 -4AOT 9.6 STK10_HUMAN
37 PsiBlast_CBE 42.0032% -73 - C1 -2Z7Q 5.6 KS6A1_HUMAN
61 PsiBlast_CBE 40.9231% -60 - C1 -2J7T 8.0 STK10_HUMAN
58 PsiBlast_CBE 40.0131% -58 - C1 -4EQU 11.4 STK10_HUMAN
56 PsiBlast_CBE 38.9431% -58 - C1 -4USE 6.3 ?
55 PsiBlast_CBE 37.9831% -61 - C1 -4USE 6.4 ?