@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NEK2_HUMAN: (2015-10-15 )
MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIADLVADEQRRNLERRGRQLGEPEKSQDSSPVLSELKLKEIQLQERERALKAREERLEQKEQELCVRERLAEDKLARAENLLKNYSLLKERKFLSLASNPELLNLPSSVIKKKVHFSGESKENIMRSENSESQLTSKSKCKDLKKRLHAAQLRAQALSDIEKNYQLKSRQILGMR

Atome Classification :

(70 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5R1_A_2(2XK8)
NEK2_HUMAN
[Raw transfer]




VGK_A_2(2WQO)
NEK2_HUMAN
[Raw transfer]




T3M_A_2(2XKD)
NEK2_HUMAN
[Raw transfer]




EQH_A_2(2XK6)
NEK2_HUMAN
[Raw transfer]




XK3_A_2(2XK3)
NEK2_HUMAN
[Raw transfer]




BX1_A_2(2XKF)
NEK2_HUMAN
[Raw transfer]




30E_A_2(2XK7)
NEK2_HUMAN
[Raw transfer]




4VQ_A_2(2XKC)
NEK2_HUMAN
[Raw transfer]




SAP_A_2(2W5B)
NEK2_HUMAN
[Raw transfer]




OL2_A_2(2XK4)
NEK2_HUMAN
[Raw transfer]




WI2_A_2(2XKE)
NEK2_HUMAN
[Raw transfer]




GOL_A_14(2XNO)
NEK2_HUMAN
[Raw transfer]




ADP_A_4(4DEE)
AURKA_HUMAN
[Raw transfer]




627_B_6(2J50)
AURKA_HUMAN
[Raw transfer]




ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]




430_A_2(2XNN)
NEK2_HUMAN
[Raw transfer]




627_A_5(2J50)
AURKA_HUMAN
[Raw transfer]




ADP_A_5(1MQ4)
AURKA_HUMAN
[Raw transfer]




ED8_A_2(2XNO)
NEK2_HUMAN
[Raw transfer]




WCX_A_2(2XNP)
NEK2_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




ACP_A_2(4UTD)
?
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




WGZ_A_2(2XNM)
NEK2_HUMAN
[Raw transfer]




N13_B_4(3W18)
AURKA_HUMAN
[Raw transfer]




GOL_C_3(1ZY4)
GCN2_YEAST
[Raw transfer]




5Z5_A_2(2JAV)
NEK2_HUMAN
[Raw transfer]




L0E_A_2(2W1E)
AURKA_HUMAN
[Raw transfer]




AK8_A_3(3EFW)
AURKA_HUMAN
[Raw transfer]




AK8_B_5(3EFW)
AURKA_HUMAN
[Raw transfer]




ADN_A_2(4O0S)
AURKA_HUMAN
[Raw transfer]




N13_A_3(3W18)
AURKA_HUMAN
[Raw transfer]




P9J_A_2(3W16)
AURKA_HUMAN
[Raw transfer]




ACP_A_5(4C3P)
AURKA_HUMAN
[Raw transfer]




ACP_D_6(4C3P)
AURKA_HUMAN
[Raw transfer]




ADP_A_2(2WQN)
NEK7_HUMAN
[Raw transfer]




EML_A_3(3MYG)
AURKA_HUMAN
[Raw transfer]




0C0_A_2(3UO4)
AURKA_HUMAN
[Raw transfer]




0C5_A_3(3UOJ)
AURKA_HUMAN
[Raw transfer]




0C5_B_4(3UOJ)
AURKA_HUMAN
[Raw transfer]




QMN_B_4(4UZD)
AURKA_HUMAN
[Raw transfer]




5GX_A_2(5AAD)
?
[Raw transfer]




NHI_A_5(4DEA)
AURKA_HUMAN
[Raw transfer]




ADN_B_2(1MUO)
AURKA_HUMAN
[Raw transfer]




7HD_A_2(5AAE)
?
[Raw transfer]




0C9_A_2(3UP7)
AURKA_HUMAN
[Raw transfer]




2QV_A_5(4OBO)
M4K4_HUMAN
[Raw transfer]




CC3_E_5(2NP8)
AURKA_HUMAN
[Raw transfer]




FH5_A_2(4BYJ)
AURKA_HUMAN
[Raw transfer]




CK7_B_6(4B9D)
NEK1_HUMAN
[Raw transfer]




0C4_B_7(3UOH)
AURKA_HUMAN
[Raw transfer]




0C8_A_2(3UP2)
AURKA_HUMAN
[Raw transfer]




NL4_A_2(5AAF)
?
[Raw transfer]




NHU_A_2(4DED)
AURKA_HUMAN
[Raw transfer]




CK7_A_3(4B9D)
NEK1_HUMAN
[Raw transfer]




QMN_A_3(4UZD)
AURKA_HUMAN
[Raw transfer]




XU2_A_2(4JAI)
AURKA_HUMAN
[Raw transfer]




0C4_A_3(3UOH)
AURKA_HUMAN
[Raw transfer]




X6D_A_4(2X6D)
AURKA_HUMAN
[Raw transfer]




E9Z_A_2(3QBN)
AURKA_HUMAN
[Raw transfer]




0BY_B_6(3UO6)
AURKA_HUMAN
[Raw transfer]




0BY_A_3(3UO6)
AURKA_HUMAN
[Raw transfer]




ZZL_A_2(2WTW)
AURKA_HUMAN
[Raw transfer]




0BZ_A_3(3UNZ)
AURKA_HUMAN
[Raw transfer]




6F2_A_2(5AAG)
?
[Raw transfer]




NHJ_A_2(4DEB)
AURKA_HUMAN
[Raw transfer]




0C3_A_2(3UOD)
AURKA_HUMAN
[Raw transfer]




FH3_A_2(4BYI)
AURKA_HUMAN
[Raw transfer]




LJE_B_4(3O50)
AURKA_HUMAN
[Raw transfer]




LJE_A_3(3O50)
AURKA_HUMAN
[Raw transfer]




ZZL_A_2(2X81)
AURKA_HUMAN
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




14 PsiBlast_PDB 88.65100%-118 - C2 -2XNO 6.6 NEK2_HUMAN
10 PsiBlast_PDB 88.48100%-123 - C2 -2XKF 6.5 NEK2_HUMAN
12 PsiBlast_PDB 87.57100%-119 - C2 -2XNM 7.7 NEK2_HUMAN
11 PsiBlast_PDB 87.32100%-126 - C2 -2XKE 6.4 NEK2_HUMAN
16 PsiBlast_PDB 86.7599%-128 - C2 -2JAV 6.6 NEK2_HUMAN
17 PsiBlast_PDB 86.5799%-117 - C2 -2W5B 5.0 NEK2_HUMAN
2 PsiBlast_PDB 86.42100%-125 - C2 -2WQO 7.3 NEK2_HUMAN
6 PsiBlast_PDB 86.33100%-122 - C2 -2XK7 6.4 NEK2_HUMAN
7 PsiBlast_PDB 85.98100%-125 - C2 -2XK8 6.9 NEK2_HUMAN
5 PsiBlast_PDB 85.83100%-125 - C2 -2XK6 6.4 NEK2_HUMAN
9 PsiBlast_PDB 85.71100%-121 - C2 -2XKD 6.7 NEK2_HUMAN
8 PsiBlast_PDB 84.98100%-119 - C2 -2XKC 6.7 NEK2_HUMAN
3 PsiBlast_PDB 83.88100%-120 - C2 -2XK3 6.1 NEK2_HUMAN
117 HHSearch 83.82100%-120 - C2 -2W5A 6.3 NEK2_HUMAN
1 PsiBlast_PDB 83.82100%-120 - C2 -2W5A 6.3 NEK2_HUMAN
15 PsiBlast_PDB 83.63100%-117 - C2 -2XNP 9.7 NEK2_HUMAN
4 PsiBlast_PDB 83.47100%-118 - C2 -2XK4 7.3 NEK2_HUMAN
13 PsiBlast_PDB 82.81100%-113 - C2 -2XNN 6.4 NEK2_HUMAN
34 PsiBlast_CBE 61.2532%-113 - C2 -3EFW 7.8 AURKA_HUMAN
119 HHSearch 59.7843%-111 - C2 -4B9D 4.8 NEK1_HUMAN
21 PsiBlast_CBE 58.9741%-108 - C2 -4B9D 6.1 NEK1_HUMAN
58 PsiBlast_CBE 58.7632% -98 - C2 -4UTD 5.0 ?
57 PsiBlast_CBE 58.6732%-105 - C2 -2X6D 6.4 AURKA_HUMAN
126 HHSearch 58.6430%-104 - C2 -4OBO 5.6 M4K4_HUMAN
68 PsiBlast_CBE 57.7832%-110 - C2 -3W16 5.1 AURKA_HUMAN
100 PsiBlast_CBE 57.5432%-106 - C2 -2X81 5.4 AURKA_HUMAN
23 PsiBlast_CBE 57.4836%-116 - C2 -2WQN 3.5 NEK7_HUMAN
69 PsiBlast_CBE 57.3532%-104 - C2 -4UZD 7.1 AURKA_HUMAN
33 PsiBlast_CBE 57.2732%-105 - C2 -2WTW 6.3 AURKA_HUMAN
64 PsiBlast_CBE 57.2032%-110 - C2 -2J50 5.0 AURKA_HUMAN
92 PsiBlast_CBE 57.1632%-102 - C2 -2W1E 4.3 AURKA_HUMAN
70 PsiBlast_CBE 57.0532%-103 - C2 -4UZD 7.5 AURKA_HUMAN
55 PsiBlast_CBE 57.0432%-103 - C2 -4BYI 5.8 AURKA_HUMAN
74 PsiBlast_CBE 56.9732%-100 - C2 -4DEA 4.6 AURKA_HUMAN
81 PsiBlast_CBE 56.9332% -94 - C2 -3UOJ 4.0 AURKA_HUMAN
73 PsiBlast_CBE 56.8632%-101 - C2 -4DEB 4.9 AURKA_HUMAN
35 PsiBlast_CBE 56.8032%-116 - C2 -3EFW 7.4 AURKA_HUMAN
65 PsiBlast_CBE 56.6232%-109 - C2 -2J50 4.9 AURKA_HUMAN
102 PsiBlast_CBE 56.5832% -98 - C2 -1MQ4 6.5 AURKA_HUMAN
59 PsiBlast_CBE 56.5632%-103 - C2 -4O0S 5.4 AURKA_HUMAN
89 PsiBlast_CBE 56.3632% -99 - C2 -3UO4 5.7 AURKA_HUMAN
54 PsiBlast_CBE 56.1432%-106 - C2 -4BYJ 5.8 AURKA_HUMAN
76 PsiBlast_CBE 55.9432% -96 - C2 -3UP2 4.3 AURKA_HUMAN
99 PsiBlast_CBE 55.8732%-105 - C2 -3MYG 4.7 AURKA_HUMAN
98 PsiBlast_CBE 55.8332%-105 - C2 -3O50 5.7 AURKA_HUMAN
82 PsiBlast_CBE 55.6332% -93 - C2 -3UOJ 3.5 AURKA_HUMAN
51 PsiBlast_CBE 55.6032%-105 - C2 -5AAD 6.1 ?
71 PsiBlast_CBE 55.5832% -99 - C2 -4DEE 6.2 AURKA_HUMAN
49 PsiBlast_CBE 55.4132%-102 - C2 -5AAF 3.9 ?
66 PsiBlast_CBE 55.2632%-108 - C2 -3W18 5.9 AURKA_HUMAN
95 PsiBlast_CBE 55.1432%-104 - C2 -4JAI 4.6 AURKA_HUMAN
75 PsiBlast_CBE 55.1332% -95 - C2 -3UP7 5.1 AURKA_HUMAN
72 PsiBlast_CBE 55.0632% -96 - C2 -4DED 5.2 AURKA_HUMAN
48 PsiBlast_CBE 54.4632%-105 - C2 -5AAG 5.5 ?
83 PsiBlast_CBE 54.4032% -96 - C2 -3UOH 5.0 AURKA_HUMAN
85 PsiBlast_CBE 54.3232% -97 - C2 -3UOD 3.6 AURKA_HUMAN
84 PsiBlast_CBE 53.9232% -96 - C2 -3UOH 4.9 AURKA_HUMAN
91 PsiBlast_CBE 53.7732% -94 - C2 -3UNZ 4.4 AURKA_HUMAN
60 PsiBlast_CBE 53.7332%-105 - C2 -4C3P 4.1 AURKA_HUMAN
50 PsiBlast_CBE 53.3532%-100 - C2 -5AAE 5.6 ?
67 PsiBlast_CBE 52.7132%-104 - C2 -3W18 5.2 AURKA_HUMAN
86 PsiBlast_CBE 52.6832% -94 - C2 -3UO6 4.4 AURKA_HUMAN
52 PsiBlast_CBE 52.4132% -99 - C2 -1MUO 3.5 AURKA_HUMAN
103 PsiBlast_CBE 52.1832% -98 - C2 -3QBN 4.6 AURKA_HUMAN
87 PsiBlast_CBE 51.4932% -93 - C2 -3UO6 4.0 AURKA_HUMAN
61 PsiBlast_CBE 51.0832%-102 - C2 -4C3P 4.8 AURKA_HUMAN
118 HHSearch 50.6832% -92 - C2 -1ZY4 2.6 GCN2_YEAST
97 PsiBlast_CBE 47.7532%-102 - C2 -3O50 6.6 AURKA_HUMAN
128 HHSearch 44.1032% -85 - C2 -2A19 4.2 E2AK2_HUMAN
101 PsiBlast_CBE 23.7032% -81 - C2 -2NP8 4.4 AURKA_HUMAN