@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NEK3_HUMAN: (2015-10-15 )
MDDYMVLRMIGEGSFGRALLVQHESSNQMFAMKEIRLPKSFSNTQNSRKEAVLLAKMKHPNIVAFKESFEAEGHLYIVMEYCDGGDLMQKIKQQKGKLFPEDMILNWFTQMCLGVNHIHKKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLSNPMAFACTYVGTPYYVPPEIWENLPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGCISPLPSHYSYELQFLVKQMFKRNPSHRPSATTLLSRGIVARLVQKCLPPEIIMEYGEEVLEEIKNSKHNTPRKKTNPSRIRIALGNEASTVQEEEQDRKGSHTDLESINENLVESALRRVNREEKGNKSVHLRKASSPNLHRRQWEKNVPNTALTALENASILTSSLTAEDDRGGSVIKYSKNTTRKQWLKETPDTLLNILKNADLSLAFQTYTIYRPGSEGFLKGPLSEETEASDSVDGGHDSVILDPERLEPGLDEEDTDFEEEDDNPDWVSELKKRAGWQGLCDR

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EQH_A_2(2XK6)
NEK2_HUMAN
[Raw transfer]




5R1_A_2(2XK8)
NEK2_HUMAN
[Raw transfer]




VGK_A_2(2WQO)
NEK2_HUMAN
[Raw transfer]




4VQ_A_2(2XKC)
NEK2_HUMAN
[Raw transfer]




XK3_A_2(2XK3)
NEK2_HUMAN
[Raw transfer]




T3M_A_2(2XKD)
NEK2_HUMAN
[Raw transfer]




WI2_A_2(2XKE)
NEK2_HUMAN
[Raw transfer]




SAP_A_2(2W5B)
NEK2_HUMAN
[Raw transfer]




30E_A_2(2XK7)
NEK2_HUMAN
[Raw transfer]




BX1_A_2(2XKF)
NEK2_HUMAN
[Raw transfer]




OL2_A_2(2XK4)
NEK2_HUMAN
[Raw transfer]




GOL_A_14(2XNO)
NEK2_HUMAN
[Raw transfer]




ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]




ED8_A_2(2XNO)
NEK2_HUMAN
[Raw transfer]




CK7_B_6(4B9D)
NEK1_HUMAN
[Raw transfer]




430_A_2(2XNN)
NEK2_HUMAN
[Raw transfer]




WCX_A_2(2XNP)
NEK2_HUMAN
[Raw transfer]




WGZ_A_2(2XNM)
NEK2_HUMAN
[Raw transfer]




CK7_A_3(4B9D)
NEK1_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




5Z5_A_2(2JAV)
NEK2_HUMAN
[Raw transfer]




ADP_A_2(2WQN)
NEK7_HUMAN
[Raw transfer]




2 PsiBlast_PDB 90.5354%-117 - C2 -4B9D 5.0 NEK1_HUMAN
21 PsiBlast_CBE 90.4654%-114 - C2 -4B9D 5.8 NEK1_HUMAN
3 PsiBlast_PDB 78.0440%-104 - C2 -2W5A 5.9 NEK2_HUMAN
11 PsiBlast_PDB 78.0340%-113 - C2 -2XKD 6.3 NEK2_HUMAN
49 HHSearch 77.7643% -98 - C2 -2W5A 5.9 NEK2_HUMAN
13 PsiBlast_PDB 77.3440%-114 - C2 -2XKE 6.0 NEK2_HUMAN
12 PsiBlast_PDB 77.2040%-109 - C2 -2XKF 6.1 NEK2_HUMAN
8 PsiBlast_PDB 77.1540%-109 - C2 -2XK7 6.2 NEK2_HUMAN
7 PsiBlast_PDB 76.9840%-107 - C2 -2XK6 5.9 NEK2_HUMAN
15 PsiBlast_PDB 76.9540%-101 - C2 -2XNN 6.2 NEK2_HUMAN
14 PsiBlast_PDB 76.6540%-103 - C2 -2XNM 7.3 NEK2_HUMAN
18 PsiBlast_PDB 76.6140%-110 - C2 -2JAV 6.4 NEK2_HUMAN
16 PsiBlast_PDB 76.4240%-106 - C2 -2XNO 6.3 NEK2_HUMAN
9 PsiBlast_PDB 76.2940%-110 - C2 -2XK8 6.8 NEK2_HUMAN
6 PsiBlast_PDB 76.0040%-101 - C2 -2XK4 7.0 NEK2_HUMAN
17 PsiBlast_PDB 75.4640%-100 - C2 -2XNP 8.9 NEK2_HUMAN
5 PsiBlast_PDB 75.3740%-105 - C2 -2XK3 5.8 NEK2_HUMAN
19 PsiBlast_PDB 75.1340%-104 - C2 -2W5B 4.6 NEK2_HUMAN
23 PsiBlast_CBE 74.6736%-113 - C2 -2WQN 4.4 NEK7_HUMAN
10 PsiBlast_PDB 74.1140%-105 - C2 -2XKC 7.0 NEK2_HUMAN
4 PsiBlast_PDB 73.5440%-108 - C2 -2WQO 7.4 NEK2_HUMAN