@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NEK7_HUMAN: (2015-10-15 )
MDEQSQGMQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VGK_A_2(2WQO)
NEK2_HUMAN
[Raw transfer]



XK3_A_2(2XK3)
NEK2_HUMAN
[Raw transfer]



OL2_A_2(2XK4)
NEK2_HUMAN
[Raw transfer]



WI2_A_2(2XKE)
NEK2_HUMAN
[Raw transfer]



T3M_A_2(2XKD)
NEK2_HUMAN
[Raw transfer]



5R1_A_2(2XK8)
NEK2_HUMAN
[Raw transfer]



EQH_A_2(2XK6)
NEK2_HUMAN
[Raw transfer]



BX1_A_2(2XKF)
NEK2_HUMAN
[Raw transfer]



AGS_A_3(3EQC)
MP2K1_HUMAN
[Raw transfer]



30E_A_2(2XK7)
NEK2_HUMAN
[Raw transfer]



ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



4VQ_A_2(2XKC)
NEK2_HUMAN
[Raw transfer]



ADP_A_2(2WQN)
NEK7_HUMAN
[Raw transfer]



ADP_B_4(4O27)
STK24_HUMAN
[Raw transfer]



ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



SAP_A_2(2W5B)
NEK2_HUMAN
[Raw transfer]



5Z5_A_2(2JAV)
NEK2_HUMAN
[Raw transfer]



ED8_A_2(2XNO)
NEK2_HUMAN
[Raw transfer]



WGZ_A_2(2XNM)
NEK2_HUMAN
[Raw transfer]



WCX_A_2(2XNP)
NEK2_HUMAN
[Raw transfer]



430_A_2(2XNN)
NEK2_HUMAN
[Raw transfer]



ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]



ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]



V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]



CK7_B_6(4B9D)
NEK1_HUMAN
[Raw transfer]



CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]



CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]



3BM_A_2(3EQC)
MP2K1_HUMAN
[Raw transfer]
2 PsiBlast_PDB 96.10100%-136 - C1 -2WQN 4.8 NEK7_HUMAN
17 PsiBlast_PDB 64.0436%-120 - C1 -2XNO 6.3 NEK2_HUMAN
82 HHSearch 63.4037%-120 * C1 *2W5A 5.3 NEK2_HUMAN
15 PsiBlast_PDB 63.1636%-119 - C1 -2XNM 7.0 NEK2_HUMAN
20 PsiBlast_PDB 62.9636%-118 - C1 -2W5B 4.5 NEK2_HUMAN
12 PsiBlast_PDB 62.7936%-122 - C1 -2XKD 6.3 NEK2_HUMAN
10 PsiBlast_PDB 62.2736%-122 - C1 -2XK8 5.9 NEK2_HUMAN
19 PsiBlast_PDB 61.5736%-127 - C1 -2JAV 5.7 NEK2_HUMAN
14 PsiBlast_PDB 61.2036%-127 - C1 -2XKE 6.1 NEK2_HUMAN
7 PsiBlast_PDB 61.1536%-118 - C1 -2XK4 6.4 NEK2_HUMAN
13 PsiBlast_PDB 61.0636%-119 - C1 -2XKF 5.8 NEK2_HUMAN
8 PsiBlast_PDB 60.9336%-120 - C1 -2XK6 5.7 NEK2_HUMAN
5 PsiBlast_PDB 60.7636%-123 - C1 -2WQO 6.9 NEK2_HUMAN
9 PsiBlast_PDB 60.4936%-125 - C1 -2XK7 6.0 NEK2_HUMAN
18 PsiBlast_PDB 59.4636%-116 - C1 -2XNP 8.8 NEK2_HUMAN
6 PsiBlast_PDB 58.5036%-122 - C1 -2XK3 6.1 NEK2_HUMAN
16 PsiBlast_PDB 58.4436%-117 - C1 -2XNN 6.6 NEK2_HUMAN
11 PsiBlast_PDB 57.9136%-117 - C1 -2XKC 6.3 NEK2_HUMAN
21 PsiBlast_CBE 57.4037%-114 - C1 -4B9D 4.7 NEK1_HUMAN
98 HHSearch 54.6431%-109 - C1 -3EQC 5.5 MP2K1_HUMAN
35 PsiBlast_CBE 42.0231% -89 - C1 -4O27 5.1 STK24_HUMAN
25 PsiBlast_CBE 41.4831% -87 - C1 -4CZT - CIPKN_ARATH
28 PsiBlast_CBE 40.2131% -87 - C1 -4CZT 4.1 CIPKN_ARATH
32 PsiBlast_CBE 40.0831% -95 - C1 -4CZU - CIPKN_ARATH
34 PsiBlast_CBE 39.8631% -86 - C1 -4CZU 4.9 CIPKN_ARATH