@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NTRK1_HUMAN: (2015-10-15 )
MLRGGRRGQLGWHSWAAGPGSLLAWLILASAGAAPCPDACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEFNPEDPIPVSFSPVDTNSTSGDPVEKKDETPFGVSVAVGLAVFACLFLSTLLLVLNKCGRRNKFGINRPAVLAPEDGLAMSLHFMTLGGSSLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVLG

Atome Classification :

(92 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EBI_A_2(3I81)

[Raw transfer]




GOL_A_8(4YNE)

[Raw transfer]




V4Z_C_10(4AOJ)

[Raw transfer]




LGV_A_2(3NW7)

[Raw transfer]




4EK_A_2(4YNE)

[Raw transfer]




ATP_A_4(3BU5)

[Raw transfer]




0F4_A_4(3V5Q)
NTRK3_HUMAN
[Raw transfer]




351_A_3(3ETA)
INSR_HUMAN
[Raw transfer]




351_B_4(3ETA)

[Raw transfer]




31W_A_2(4PMP)

[Raw transfer]




V4Z_B_7(4AOJ)
NTRK1_HUMAN
[Raw transfer]




MUJ_A_2(4AT5)

[Raw transfer]




31Y_A_2(4PMT)

[Raw transfer]




QB4_A_2(4CLJ)

[Raw transfer]




GOL_A_4(4YMJ)
NTRK3_HUMAN
[Raw transfer]




LGW_A_2(3NW6)

[Raw transfer]




QB4_A_2(4CLJ)

[Raw transfer]




571_A_2(2XBA)

[Raw transfer]




ACP_A_5(2PVF)

[Raw transfer]




ANP_A_5(1IR3)

[Raw transfer]




V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]




V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]




0LI_B_7(3ZOS)

[Raw transfer]




LGX_A_2(3NW5)

[Raw transfer]




STI_A_3(4BKJ)
DDR1_HUMAN
[Raw transfer]




GOL_A_3(3L9P)

[Raw transfer]




ACP_A_2(4XLV)
?
[Raw transfer]




GOL_A_2(3LCT)

[Raw transfer]




STI_A_3(4BKJ)
DDR1_HUMAN
[Raw transfer]




STI_B_14(4BKJ)

[Raw transfer]




GOL_A_3(3L9P)

[Raw transfer]




01P_D_8(3QQU)

[Raw transfer]




IR1_B_4(4IBM)
?
[Raw transfer]




FMT_A_10(4CKJ)

[Raw transfer]




NZF_A_2(4FNZ)

[Raw transfer]




IR1_A_3(4IBM)
?
[Raw transfer]




5P8_A_2(4CLI)

[Raw transfer]




LTI_A_2(4AT3)

[Raw transfer]




4EJ_A_3(4YMJ)
NTRK3_HUMAN
[Raw transfer]




GOL_A_2(4MKC)

[Raw transfer]




GOL_A_3(3LCS)

[Raw transfer]




STU_A_3(3CBL)

[Raw transfer]




112_B_5(1GAG)

[Raw transfer]




0JF_B_4(4DCE)

[Raw transfer]




T6E_A_2(4AT4)

[Raw transfer]




AWJ_A_2(4CD0)

[Raw transfer]




STI_A_4(1T46)
?
[Raw transfer]




GUI_A_2(2XB7)

[Raw transfer]




J99_A_2(4CTC)

[Raw transfer]




0LI_A_3(3ZOS)
DDR1_HUMAN
[Raw transfer]




3U9_A_3(4CNH)
ALK_HUMAN
[Raw transfer]




4F6_A_2(4YPS)

[Raw transfer]




4VD_A_3(5BVN)
?
[Raw transfer]




STU_A_2(1U59)

[Raw transfer]




4EJ_B_8(4YMJ)

[Raw transfer]




GOL_A_2(3L9P)

[Raw transfer]




0VF_A_2(4FYO)

[Raw transfer]




YPW_A_2(4CMO)

[Raw transfer]




01P_A_5(3QQU)
IGF1R_HUMAN
[Raw transfer]




ACP_A_3(1I44)

[Raw transfer]




IV7_A_2(4CMU)

[Raw transfer]




3U9_B_4(4CNH)

[Raw transfer]




01P_B_6(3QQU)
IGF1R_HUMAN
[Raw transfer]




VGH_A_2(2YFX)

[Raw transfer]




112_F_10(1RQQ)

[Raw transfer]




VGH_A_2(4ANQ)

[Raw transfer]




01P_C_7(3QQU)
IGF1R_HUMAN
[Raw transfer]




I3K_A_2(4FNY)

[Raw transfer]




GS2_A_2(3EKK)

[Raw transfer]




0JF_A_3(4DCE)
ALK_HUMAN
[Raw transfer]




VGH_A_2(4ANS)

[Raw transfer]




STU_A_2(3LCS)

[Raw transfer]




AWF_A_2(4CCU)

[Raw transfer]




BMI_B_2(2OJ9)

[Raw transfer]




0US_A_2(4FOB)

[Raw transfer]




KVC_A_2(4CTB)

[Raw transfer]




VGH_A_2(3ZBF)

[Raw transfer]




ADN_A_2(4CKJ)

[Raw transfer]




DYK_A_3(4D2R)

[Raw transfer]




GS3_A_2(3EKN)

[Raw transfer]




0UU_A_2(4FOC)

[Raw transfer]




1N1_A_10(5BVW)
?
[Raw transfer]




ADP_A_3(3LCT)

[Raw transfer]




07J_A_3(3TT0)
FGFR1_HUMAN
[Raw transfer]




4MK_A_4(4MKC)

[Raw transfer]




0UV_A_2(4FOD)

[Raw transfer]




EMH_A_2(3AOX)

[Raw transfer]




ANP_B_9(1JQH)
IGF1R_HUMAN
[Raw transfer]




00J_A_2(2XIR)

[Raw transfer]




PDR_A_5(3LVP)
IGF1R_HUMAN
[Raw transfer]




DB8_A_2(4OTW)

[Raw transfer]




S91_A_3(2Z8C)

[Raw transfer]




4VC_A_8(5BVK)
?
[Raw transfer]




CCX_D_13(3LW0)

[Raw transfer]




CCX_C_10(3LW0)
IGF1R_HUMAN
[Raw transfer]




CCX_B_7(3LW0)
IGF1R_HUMAN
[Raw transfer]




CCX_A_5(3LW0)
IGF1R_HUMAN
[Raw transfer]




EDO_A_4(3AOX)

[Raw transfer]




EDO_A_4(4TT7)

[Raw transfer]




3U9_B_5(4CNH)

[Raw transfer]




EDO_A_13(4BKJ)

[Raw transfer]




22 PsiBlast_CBE 91.95100%-132 - C3 -4AOJ 8.0
23 PsiBlast_CBE 91.77100%-134 - C3 -4AOJ 7.9 NTRK1_HUMAN
130 HHSearch 91.63100%-135 - C3 -4AOJ 8.1 NTRK1_HUMAN
2 PsiBlast_PDB 91.63100%-135 - C3 -4AOJ 8.1 NTRK1_HUMAN
7 PsiBlast_PDB 91.28100%-128 - C3 -4PMP 9.1
5 PsiBlast_PDB 90.94100%-126 - C3 -4YNE 9.7
6 PsiBlast_PDB 89.90100%-124 - C3 -4YPS 6.6
8 PsiBlast_PDB 89.65100%-130 - C3 -4PMT 7.5
10 PsiBlast_PDB 86.0275%-123 - C3 -4AT3 6.9
11 PsiBlast_PDB 85.6675%-126 - C3 -4AT4 9.6
12 PsiBlast_PDB 85.5375%-120 - C3 -4AT5 9.0
13 PsiBlast_PDB 84.4876%-129 - C3 -3V5Q 10.9 NTRK3_HUMAN
72 PsiBlast_CBE 76.5541%-120 - C3 -4CNH 6.5
87 PsiBlast_CBE 76.1541%-120 - C3 -4FOB 8.9
84 PsiBlast_CBE 75.8841%-124 - C3 -2XB7 6.9
135 HHSearch 75.8048%-120 - C3 -4BKJ 8.4 DDR1_HUMAN
51 PsiBlast_CBE 75.7340%-111 - C3 -4MKC 6.8
74 PsiBlast_CBE 75.6141%-119 - C3 -4CMU 7.4
73 PsiBlast_CBE 75.5741%-123 - C3 -4CNH 6.1 ALK_HUMAN
76 PsiBlast_CBE 75.4941%-119 - C3 -4CMO 6.2
86 PsiBlast_CBE 75.4741%-120 - C3 -4FOC 8.6
62 PsiBlast_CBE 75.3140%-112 - C3 -3LCS 8.8
64 PsiBlast_CBE 75.2941%-118 - C3 -4FOD 10.0
65 PsiBlast_CBE 75.1941%-125 - C3 -4DCE 9.6
71 PsiBlast_CBE 75.1841%-123 - C3 -4CTB 7.4
77 PsiBlast_CBE 75.1641%-118 - C3 -4CLI 7.1
63 PsiBlast_CBE 75.0241%-121 - C3 -4FNW -
67 PsiBlast_CBE 74.8341%-119 - C3 -4CD0 7.7
83 PsiBlast_CBE 74.7241%-127 - C3 -2XBA 6.9
69 PsiBlast_CBE 74.6941%-120 - C3 -4FNZ 8.6
52 PsiBlast_CBE 74.6640%-111 - C3 -3L9P 2.6
48 PsiBlast_CBE 74.6445%-116 - C3 -5BVK 3.4 ?
136 HHSearch 74.5843%-116 - C3 -4CLJ 6.9
82 PsiBlast_CBE 74.5641%-121 - C3 -2YFX 7.4
47 PsiBlast_CBE 74.5645%-121 - C3 -5BVN 8.0 ?
81 PsiBlast_CBE 74.4841%-117 - C3 -4CLJ 6.9
88 PsiBlast_CBE 74.3741%-121 - C3 -4ANQ 7.5
133 HHSearch 74.3642%-109 - C3 -3L9P 2.5
89 PsiBlast_CBE 74.3541%-124 - C3 -4FNY 10.8
24 PsiBlast_CBE 74.3576% -80 - C3 -4YMJ 5.7
70 PsiBlast_CBE 74.3141%-122 - C3 -4CTC 7.2
91 PsiBlast_CBE 74.2641%-120 - C3 -4ANS 7.5
66 PsiBlast_CBE 74.2341%-120 - C3 -4DCE 8.9 ALK_HUMAN
61 PsiBlast_CBE 74.1740%-107 - C3 -3LCT 4.7
137 HHSearch 74.1540%-118 - C3 -3CBL 8.5
85 PsiBlast_CBE 74.1541%-117 - C3 -4TT7 2.6
78 PsiBlast_CBE 74.0741%-119 - C3 -4CCU 7.6
29 PsiBlast_CBE 74.0542%-116 - C3 -3LW0 4.3 IGF1R_HUMAN
46 PsiBlast_CBE 73.9945%-121 - C3 -5BVW 5.2 ?
43 PsiBlast_CBE 73.9145%-116 - C3 -4BKJ 8.4 DDR1_HUMAN
42 PsiBlast_CBE 73.5445%-112 - C3 -4BKJ 8.3
68 PsiBlast_CBE 73.5041%-119 - C3 -3AOX 6.5
30 PsiBlast_CBE 73.4842%-118 - C3 -3LW0 3.4 IGF1R_HUMAN
28 PsiBlast_CBE 73.4442%-116 - C3 -3LW0 3.7 IGF1R_HUMAN
27 PsiBlast_CBE 73.2342%-114 - C3 -3LW0 4.6
143 HHSearch 73.1537%-119 - C3 -2PVF 4.9
145 HHSearch 73.1337%-114 - C3 -1T46 8.0 ?
44 PsiBlast_CBE 73.0445%-106 - C3 -3ZOS 10.1
19 PsiBlast_PDB 72.8741%-115 - C3 -3I81 8.6
25 PsiBlast_CBE 72.7441%-114 - C3 -1JQH 4.4 IGF1R_HUMAN
9 PsiBlast_PDB 72.6976% -79 - C3 -4YMJ 7.5 NTRK3_HUMAN
139 HHSearch 72.6139%-119 - C3 -4CKJ 5.1
38 PsiBlast_CBE 72.5741%-114 - C3 -3NW5 7.7
37 PsiBlast_CBE 72.4441%-114 - C3 -3NW6 8.6
115 PsiBlast_CBE 72.4042%-121 - C3 -3BU5 5.3
45 PsiBlast_CBE 72.4045%-110 - C3 -3ZOS 10.4 DDR1_HUMAN
36 PsiBlast_CBE 72.3641%-115 - C3 -3NW7 8.4
39 PsiBlast_CBE 72.2841%-115 - C3 -2OJ9 8.0
54 PsiBlast_CBE 71.9643%-125 - C3 -3EKK 5.8
41 PsiBlast_CBE 71.8241%-112 - C3 -4D2R 5.4
20 PsiBlast_PDB 71.8144%-113 - C3 -3ETA 12.2 INSR_HUMAN
59 PsiBlast_CBE 71.7443%-117 - C3 -1I44 5.1
26 PsiBlast_CBE 71.6344%-113 - C3 -3ETA 12.1
31 PsiBlast_CBE 71.5941%-115 - C3 -3QQU 5.7
49 PsiBlast_CBE 71.5744%-111 - C3 -4IBM 7.3 ?
112 PsiBlast_CBE 71.5642%-118 - C3 -1IR3 5.7
18 PsiBlast_PDB 71.4041%-118 - C3 -3LVP 3.8 IGF1R_HUMAN
113 PsiBlast_CBE 71.2242%-119 - C3 -1GAG 6.0
34 PsiBlast_CBE 71.1141%-118 - C3 -3QQU 7.2 IGF1R_HUMAN
33 PsiBlast_CBE 71.0541%-118 - C3 -3QQU 6.9 IGF1R_HUMAN
50 PsiBlast_CBE 71.0344%-111 - C3 -4IBM 7.4 ?
140 HHSearch 71.0141%-119 * C3 *3ZBF 7.4
32 PsiBlast_CBE 70.9841%-113 - C3 -3QQU 8.3 IGF1R_HUMAN
144 HHSearch 70.9539%-112 - C3 -3TT0 7.1 FGFR1_HUMAN
53 PsiBlast_CBE 70.9243%-116 - C3 -3EKN 6.0
120 PsiBlast_CBE 70.7642%-114 - C3 -1RQQ 4.6
148 HHSearch 70.1138%-117 - C3 -2XIR 7.2
111 PsiBlast_CBE 69.4542%-113 - C3 -2Z8C 4.0
142 HHSearch 69.1336%-118 - C3 -1U59 6.1
146 HHSearch 67.3134%-117 - C3 -4FYO 6.7
150 HHSearch 66.4733%-113 - C3 -4OTW 7.1
110 PsiBlast_CBE 62.0842% -85 - C3 -4XLV 4.8 ?