@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NUAK1_HUMAN: (2015-10-16 )
MEGAAAPVAGDRPDLGLGAPGSPREAVAGATAALEPRKPHGVKRHHHKHNLKHRYELQETLGKGTYGKVKRATERFSGRVVAIKSIRKDKIKDEQDMVHIRREIEIMSSLNHPHIISIYEVFENKDKIVIIMEYASKGELYDYISERRRLSERETRHFFRQIVSAVHYCHKNGVVHRDLKLENILLDDNCNIKIADFGLSNLYQKDKFLQTFCGSPLYASPEIVNGRPYRGPEVDSWALGVLLYTLVYGTMPFDGFDHKNLIRQISSGEYREPTQPSDARGLIRWMLMVNPDRRATIEDIANHWWVNWGYKSSVCDCDALHDSESPLLARIIDWHHRSTGLQADTEAKMKGLAKPTTSEVMLERQRSLKKSKKENDFAQSGQDAVPESPSKLSSKRPKGILKKRSNSEHRSHSTGFIEGVVGPALPSTFKMEQDLCRTGVLLPSSPEAEVPGKLSPKQSATMPKKGILKKTQQRESGYYSSPERSESSELLDSNDVMGSSIPSPSPPDPARVTSHSLSCRRKGILKHSSKYSAGTMDPALVSPEMPTLESLSEPGVPAEGLSRSYSRPSSVISDDSVLSSDSFDLLDLQENRPARQRIRSCVSAENFLQIQDFEGLQNRPRPQYLKRYRNRLADSSFSLLTDMDDVTQVYKQALEICSKLN

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CPS_B_12(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]




Z2M_A_2(4BDJ)
CHK2_HUMAN
[Raw transfer]




ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]




1D1_A_2(4I5P)
PLK2_HUMAN
[Raw transfer]




38G_A_2(4TXC)
DAPK1_HUMAN
[Raw transfer]




CWS_A_4(4BDE)
CHK2_HUMAN
[Raw transfer]




R78_A_2(4I5M)
PLK2_HUMAN
[Raw transfer]




P3J_A_2(4BDG)
CHK2_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




1C7_A_2(4I6F)
PLK2_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




H3R_A_2(4BDF)
CHK2_HUMAN
[Raw transfer]




1C8_A_2(4I6H)
PLK2_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




WVI_A_3(4BDH)
CHK2_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




11G_A_2(4I6B)
PLK2_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




RQQ_A_2(4BDK)
CHK2_HUMAN
[Raw transfer]




HAU_A_2(4BDI)
CHK2_HUMAN
[Raw transfer]




CPS_B_10(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_B_12(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_C_16(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_D_23(4CZT)
CIPKN_ARATH
[Raw transfer]




Z0O_A_3(4BDD)
CHK2_HUMAN
[Raw transfer]




CPS_D_23(4CZU)
CIPKN_ARATH
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_C_16(4CZU)
CIPKN_ARATH
[Raw transfer]




EDO_A_3(4BDE)
CHK2_HUMAN
[Raw transfer]




1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]




EDO_A_4(4BDD)
CHK2_HUMAN
[Raw transfer]




EDO_A_5(4BDH)
CHK2_HUMAN
[Raw transfer]




CPS_C_16(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]




EDO_A_3(4TXC)
DAPK1_HUMAN
[Raw transfer]




135 HHSearch 80.8735%-100 - C2 -3HKO 5.3 ?
31 PsiBlast_CBE 79.7337% -85 - C2 -4CZU 5.7 CIPKN_ARATH
25 PsiBlast_CBE 79.0838% -80 - C2 -4CZT 5.0 CIPKN_ARATH
27 PsiBlast_CBE 79.0238% -84 - C2 -4CZT 5.2 CIPKN_ARATH
24 PsiBlast_CBE 78.8547% -99 - C2 -3AQV 7.5 AAPK2_HUMAN
30 PsiBlast_CBE 78.5637% -85 - C2 -4CZU 5.0 CIPKN_ARATH
26 PsiBlast_CBE 78.5138% -88 - C2 -4CZT 5.2 CIPKN_ARATH
98 PsiBlast_CBE 77.5034% -95 - C2 -4TXC 7.3 DAPK1_HUMAN
123 HHSearch 77.0936% -96 - C2 -2Y0A 2.3 DAPK1_HUMAN
29 PsiBlast_CBE 76.9837% -79 - C2 -4CZU 4.8 CIPKN_ARATH
105 PsiBlast_CBE 76.8635%-104 - C2 -4BDF 4.7 CHK2_HUMAN
107 PsiBlast_CBE 76.6835%-110 - C2 -4BDD 4.8 CHK2_HUMAN
32 PsiBlast_CBE 76.5637% -80 - C2 -4CZU 5.9 CIPKN_ARATH
28 PsiBlast_CBE 76.4638% -79 - C2 -4CZT 4.4 CIPKN_ARATH
95 PsiBlast_CBE 75.9135% -97 - C2 -4I6B 4.3 PLK2_HUMAN
82 PsiBlast_CBE 75.4734% -93 - C2 -3MA6 5.6 ?
94 PsiBlast_CBE 75.3635% -96 - C2 -4I6F 6.2 PLK2_HUMAN
91 PsiBlast_CBE 75.1934% -98 - C2 -4B4L 2.1 DAPK1_HUMAN
93 PsiBlast_CBE 75.0135%-100 - C2 -4I6H 4.7 PLK2_HUMAN
104 PsiBlast_CBE 74.8635%-100 - C2 -4BDG 3.8 CHK2_HUMAN
83 PsiBlast_CBE 74.6834% -93 - C2 -3MA6 4.7 ?
100 PsiBlast_CBE 74.6435%-103 - C2 -4BDK 3.3 CHK2_HUMAN
96 PsiBlast_CBE 74.5735% -97 - C2 -4I5P 4.7 PLK2_HUMAN
97 PsiBlast_CBE 74.5135% -92 - C2 -4I5M 5.9 PLK2_HUMAN
106 PsiBlast_CBE 73.7935%-110 - C2 -4BDE 5.0 CHK2_HUMAN
102 PsiBlast_CBE 73.6935%-101 - C2 -4BDI 3.7 CHK2_HUMAN
92 PsiBlast_CBE 73.5335% -95 - C2 -2XUU 5.3 DAPK1_HUMAN
88 PsiBlast_CBE 73.5234% -88 - C2 -2WEI 6.9 ?
103 PsiBlast_CBE 73.0835%-107 - C2 -4BDH 3.6 CHK2_HUMAN
101 PsiBlast_CBE 72.4635%-107 - C2 -4BDJ 5.3 CHK2_HUMAN
127 HHSearch 72.4031% -98 - C2 -2W5A 4.2 NEK2_HUMAN
125 HHSearch 66.1532% -86 - C2 -2YEX 6.4 CHK1_HUMAN