@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PAK3_HUMAN: (2015-10-16 )
MSDGLDNEEKPPAPPLRMNSNNRDSSALNHSSKPLPMAPEEKNKKARLRSIFPGGGDKTNKKKEKERPEISLPSDFEHTIHVGFDAVTGEFTPDLYGSQMCPGKLPEGIPEQWARLLQTSNITKLEQKKNPQAVLDVLKFYDSKETVNNQKYMSFTSGDKSAHGYIAAHPSSTKTASEPPLAPPVSEEEDEEEEEEEDENEPPPVIAPRPEHTKSIYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNTDRQRKKSKMTDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAAKEAIKNSSR

Atome Classification :

(95 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

X4Z_A_3(4O0R)
PAK1_HUMAN
[Raw transfer]




4T6_B_5(4ZY6)
PAK1_HUMAN
[Raw transfer]




4T3_B_5(4ZY4)
PAK1_HUMAN
[Raw transfer]




4T5_B_6(4ZY5)
PAK1_HUMAN
[Raw transfer]




X4Z_A_4(2X4Z)

[Raw transfer]




X4Z_A_3(4KS7)

[Raw transfer]




NJD_A_2(4NJD)
PAK4_HUMAN
[Raw transfer]




N53_A_2(4APP)

[Raw transfer]




GOL_A_3(4APP)

[Raw transfer]




ANP_A_3(4FIE)
PAK4_HUMAN
[Raw transfer]




X4Z_A_3(4KS7)

[Raw transfer]




GW8_B_10(4AOT)
STK10_HUMAN
[Raw transfer]




ANP_B_6(4FIF)
PAK4_HUMAN
[Raw transfer]




ANP_A_3(4JDI)
PAK4_HUMAN
[Raw transfer]




GVD_B_11(3GGF)
STK26_HUMAN
[Raw transfer]




GOL_A_2(2X4Z)

[Raw transfer]




ANP_A_5(4FIF)
PAK4_HUMAN
[Raw transfer]




ANP_A_3(4JDI)
PAK4_HUMAN
[Raw transfer]




2OL_A_3(4O0T)
PAK1_HUMAN
[Raw transfer]




GW8_A_7(4AOT)
STK10_HUMAN
[Raw transfer]




3JA_A_2(4W8D)
STK24_HUMAN
[Raw transfer]




ANP_B_6(4FIG)
?
[Raw transfer]




ANP_A_3(4FIG)
?
[Raw transfer]




4T6_A_2(5BMS)

[Raw transfer]




3JB_A_2(4W8E)
STK24_HUMAN
[Raw transfer]




2K0_B_4(4P90)
PAK1_HUMAN
[Raw transfer]




ADP_A_2(3A7J)
STK24_HUMAN
[Raw transfer]




GVD_A_7(3GGF)
STK26_HUMAN
[Raw transfer]




627_B_10(4QO9)
?
[Raw transfer]




KS1_A_2(4QMW)
STK24_HUMAN
[Raw transfer]




ADP_B_4(4O27)
STK24_HUMAN
[Raw transfer]




627_A_6(4QO9)
?
[Raw transfer]




2OL_A_2(4O0V)

[Raw transfer]




GVD_A_9(2UV2)
SLK_HUMAN
[Raw transfer]




GOL_B_3(4FZA)
STK26_HUMAN
[Raw transfer]




GOL_A_4(4ZLO)
?
[Raw transfer]




STU_A_2(3CKX)
STK24_HUMAN
[Raw transfer]




XR1_A_2(4EQC)
PAK1_HUMAN
[Raw transfer]




DKI_B_3(4FZF)
?
[Raw transfer]




2OQ_A_2(4O0X)
?
[Raw transfer]




6UI_A_3(4USF)
?
[Raw transfer]




2OO_A_2(4O0Y)

[Raw transfer]




B49_A_2(4KS8)

[Raw transfer]




GOL_B_4(4FZD)
STK26_HUMAN
[Raw transfer]




H1N_A_2(4QMT)
STK24_HUMAN
[Raw transfer]




3FE_A_3(4U8Z)
STK24_HUMAN
[Raw transfer]




35R_A_2(4QMM)
STK24_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




ATP_B_4(3A7H)
STK24_HUMAN
[Raw transfer]




ATP_A_3(3A7H)
STK24_HUMAN
[Raw transfer]




23D_A_2(2CDZ)
PAK4_HUMAN
[Raw transfer]




34L_A_3(4QMO)
STK24_HUMAN
[Raw transfer]




GOL_B_4(4FZA)
STK26_HUMAN
[Raw transfer]




6UI_B_4(4USF)
?
[Raw transfer]




274_A_10(2J7T)
STK10_HUMAN
[Raw transfer]




ADE_A_2(3A7I)
STK24_HUMAN
[Raw transfer]




ANP_A_4(4QML)
STK24_HUMAN
[Raw transfer]




23D_B_5(2F57)

[Raw transfer]




FLL_A_2(3FXZ)
?
[Raw transfer]




DKI_A_3(4QMP)
STK24_HUMAN
[Raw transfer]




R09_B_4(4USE)
?
[Raw transfer]




STU_A_2(4QMY)
STK24_HUMAN
[Raw transfer]




FLL_A_2(3FXZ)
?
[Raw transfer]




B49_A_2(4QMZ)
STK24_HUMAN
[Raw transfer]




SKE_A_2(4QMU)
STK24_HUMAN
[Raw transfer]




J60_A_3(2XIK)
STK25_HUMAN
[Raw transfer]




ADE_A_2(3A7I)
STK24_HUMAN
[Raw transfer]




J60_B_3(4NZW)
STK25_HUMAN
[Raw transfer]




DKI_A_13(2J51)
SLK_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




34U_A_2(4QMQ)
STK24_HUMAN
[Raw transfer]




ANP_A_4(3Q4Z)
PAK1_HUMAN
[Raw transfer]




2QV_A_5(4OBO)
M4K4_HUMAN
[Raw transfer]




ANP_D_20(2VWI)
OXSR1_HUMAN
[Raw transfer]




R09_A_3(4USE)
?
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




4OR_A_5(4ZJJ)
PAK1_HUMAN
[Raw transfer]




4OR_D_9(4ZJJ)
PAK1_HUMAN
[Raw transfer]




G6I_A_3(4EQU)
STK10_HUMAN
[Raw transfer]




G6I_B_6(4EQU)
STK10_HUMAN
[Raw transfer]




DW1_A_2(3FY0)
PAK1_HUMAN
[Raw transfer]




R09_B_4(4USD)
?
[Raw transfer]




4OQ_D_9(4ZJI)
?
[Raw transfer]




4OQ_A_5(4ZJI)
PAK1_HUMAN
[Raw transfer]




4OQ_B_6(4ZJI)
PAK1_HUMAN
[Raw transfer]




4OQ_C_7(4ZJI)
?
[Raw transfer]




4OR_C_7(4ZJJ)
PAK1_HUMAN
[Raw transfer]




4OR_B_6(4ZJJ)
PAK1_HUMAN
[Raw transfer]




DB8_A_3(5AJQ)
STK10_HUMAN
[Raw transfer]




XZN_A_2(4BC6)
STK10_HUMAN
[Raw transfer]




1N1_A_2(4QMS)
STK24_HUMAN
[Raw transfer]




34W_A_2(4QMV)
STK24_HUMAN
[Raw transfer]




DMS_B_6(4ZY4)
PAK1_HUMAN
[Raw transfer]




EDO_A_5(2J0I)
PAK4_HUMAN
[Raw transfer]




DB8_A_2(4QMN)
STK24_HUMAN
[Raw transfer]




H8H_A_2(4QMX)
STK24_HUMAN
[Raw transfer]




4PV_A_3(4ZLO)
?
[Raw transfer]




X11_A_2(4QNA)
?
[Raw transfer]




DMS_B_7(4ZY5)
PAK1_HUMAN
[Raw transfer]




EDO_A_9(2Q0N)
PAK4_HUMAN
[Raw transfer]




EDO_A_4(2J0I)
PAK4_HUMAN
[Raw transfer]




EDO_A_5(2W5A)
NEK2_HUMAN
[Raw transfer]




TRS_A_4(2F57)
PAK7_HUMAN
[Raw transfer]




EDO_A_2(4QML)
STK24_HUMAN
[Raw transfer]




EDO_A_10(2Q0N)
PAK4_HUMAN
[Raw transfer]




123 HHSearch 91.2995%-110 - C1 -3FXZ 7.2 ?
10 PsiBlast_PDB 91.0494%-110 - C1 -3FXZ 7.2 ?
13 PsiBlast_PDB 89.9194%-109 - C1 -4EQC 8.5 PAK1_HUMAN
29 PsiBlast_CBE 89.7694%-110 - C1 -4ZY4 5.6 PAK1_HUMAN
15 PsiBlast_PDB 89.6094%-109 - C1 -4O0R 6.8 PAK1_HUMAN
14 PsiBlast_PDB 89.5893%-115 - C1 -3Q4Z 5.8 PAK1_HUMAN
16 PsiBlast_PDB 88.6994%-106 - C1 -4O0T 8.5 PAK1_HUMAN
11 PsiBlast_PDB 88.3494%-107 - C1 -3FY0 5.3 PAK1_HUMAN
2 PsiBlast_PDB 88.2595%-117 - C1 -4ZJJ 9.5 PAK1_HUMAN
1 PsiBlast_PDB 88.2595%-117 - C1 -4ZJI 7.6 PAK1_HUMAN
26 PsiBlast_CBE 88.2195%-118 - C1 -4ZJI 7.6 PAK1_HUMAN
28 PsiBlast_CBE 88.1494%-111 - C1 -4ZY5 5.5 PAK1_HUMAN
27 PsiBlast_CBE 87.1194%-109 - C1 -4ZY6 6.7 PAK1_HUMAN
23 PsiBlast_CBE 86.1495%-118 - C1 -4ZJJ 9.6 PAK1_HUMAN
32 PsiBlast_CBE 82.5294%-116 - C1 -4P90 6.6 PAK1_HUMAN
25 PsiBlast_CBE 81.7295%-110 - C1 -4ZJI 8.2 ?
122 HHSearch 80.9945% -98 - C1 -4FIE 5.8 PAK4_HUMAN
24 PsiBlast_CBE 80.8095%-110 - C1 -4ZJI 8.1 ?
21 PsiBlast_CBE 80.7895%-119 - C1 -4ZJJ 9.8 PAK1_HUMAN
45 PsiBlast_CBE 79.9352%-107 - C1 -2F57 4.0 PAK7_HUMAN
40 PsiBlast_CBE 78.8852%-108 - C1 -2CDZ 6.6 PAK4_HUMAN
43 PsiBlast_CBE 78.6553%-104 - C1 -2X4Z 7.8
124 HHSearch 78.3452%-100 - C1 -4JDI 7.3 PAK4_HUMAN
22 PsiBlast_CBE 78.1395%-111 - C1 -4ZJJ 8.8 PAK1_HUMAN
33 PsiBlast_CBE 77.8752%-103 - C1 -4JDI 7.3 PAK4_HUMAN
37 PsiBlast_CBE 77.2352%-102 - C1 -4FIF 6.2 PAK4_HUMAN
44 PsiBlast_CBE 76.8652%-100 - C1 -2F57 5.8
38 PsiBlast_CBE 76.8352%-103 - C1 -2Q0N 2.7 PAK4_HUMAN
39 PsiBlast_CBE 76.6952%-105 - C1 -2J0I 3.6 PAK4_HUMAN
42 PsiBlast_CBE 76.4553%-101 - C1 -4APP 8.0
49 PsiBlast_CBE 76.4053%-102 - C1 -4O0X 9.4 ?
51 PsiBlast_CBE 75.7750%-104 - C1 -4KS8 6.4
48 PsiBlast_CBE 75.6353%-102 - C1 -4O0Y 5.0
50 PsiBlast_CBE 75.2353%-102 - C1 -4O0V 8.8
36 PsiBlast_CBE 75.0452%-101 - C1 -4FIG 6.4 ?
19 PsiBlast_PDB 74.8152%-104 - C1 -4FIG 6.5 ?
125 HHSearch 74.4050%-104 - C1 -4KS7 7.4
52 PsiBlast_CBE 74.4050%-104 - C1 -4KS7 7.4
18 PsiBlast_PDB 74.2952% -97 - C1 -4FIF 5.8 PAK4_HUMAN
41 PsiBlast_CBE 73.6253%-101 - C1 -4NJD 7.4 PAK4_HUMAN
132 HHSearch 66.6746% -95 * C1 *3A7I 4.2 STK24_HUMAN
66 PsiBlast_CBE 64.7345% -99 - C1 -3A7I 4.2 STK24_HUMAN
7 PsiBlast_PDB 64.6794% -64 - C1 -4ZLO 6.6 ?
90 PsiBlast_CBE 63.4645% -94 - C1 -2XIK 6.1 STK25_HUMAN
108 PsiBlast_CBE 62.6039%-100 - C1 -5AJQ 6.3 STK10_HUMAN
65 PsiBlast_CBE 62.3545% -97 - C1 -3A7J 5.9 STK24_HUMAN
68 PsiBlast_CBE 62.2345% -93 - C1 -3A7H 4.3 STK24_HUMAN
67 PsiBlast_CBE 62.0145% -96 - C1 -3A7H 4.4 STK24_HUMAN
61 PsiBlast_CBE 60.9645%-102 - C1 -4FZD 2.1 STK26_HUMAN
105 PsiBlast_CBE 60.7338% -95 - C1 -4AOT 8.6 STK10_HUMAN
87 PsiBlast_CBE 60.3145% -97 - C1 -3CKX 8.2 STK24_HUMAN
91 PsiBlast_CBE 60.1141% -97 - C1 -4USF 7.3 ?
102 PsiBlast_CBE 59.9538% -98 - C1 -4USD 8.7 ?
58 PsiBlast_CBE 59.8045%-101 - C1 -3GGF 7.8 STK26_HUMAN
62 PsiBlast_CBE 59.7345% -93 - C1 -4FZA 2.8 STK26_HUMAN
92 PsiBlast_CBE 59.0741%-104 - C1 -4USF 7.4 ?
106 PsiBlast_CBE 58.5438% -94 - C1 -4AOT 9.7 STK10_HUMAN
60 PsiBlast_CBE 58.4045% -93 - C1 -4FZF 5.4 ?
63 PsiBlast_CBE 57.7645% -94 - C1 -4O27 5.4 STK24_HUMAN
128 HHSearch 57.6240% -97 - C1 -2J7T 8.2 STK10_HUMAN
57 PsiBlast_CBE 57.3245% -97 - C1 -3GGF 8.1 STK26_HUMAN
93 PsiBlast_CBE 56.7941% -94 - C1 -2UV2 5.2 SLK_HUMAN
109 PsiBlast_CBE 56.1138% -94 - C1 -4BC6 7.0 STK10_HUMAN
64 PsiBlast_CBE 55.7545% -98 - C1 -4NZW 5.6 STK25_HUMAN
94 PsiBlast_CBE 54.9741% -94 - C1 -2J51 5.0 SLK_HUMAN
47 PsiBlast_CBE 54.8253% -60 - C1 -5BMS 6.4
101 PsiBlast_CBE 54.6138% -91 - C1 -4USE 7.2 ?
110 PsiBlast_CBE 54.5640%-108 - C1 -2VWI 4.3 OXSR1_HUMAN
129 HHSearch 54.4841%-106 - C1 -4OBO 5.5 M4K4_HUMAN
100 PsiBlast_CBE 52.6138% -91 - C1 -4USE 6.7 ?
135 HHSearch 52.1034% -94 - C1 -3HKO 5.4 ?
103 PsiBlast_CBE 51.4038% -95 - C1 -4EQU 12.4 STK10_HUMAN
131 HHSearch 50.7031% -95 - C1 -3C0I 3.8 CSKP_HUMAN
104 PsiBlast_CBE 50.5238% -97 - C1 -4EQU 12.4 STK10_HUMAN
134 HHSearch 46.0231% -95 - C1 -2W5A 4.4 NEK2_HUMAN
86 PsiBlast_CBE 42.7845% -56 - C1 -4W8E 7.0 STK24_HUMAN
75 PsiBlast_CBE 42.6245% -54 - C1 -4QMW 7.1 STK24_HUMAN
73 PsiBlast_CBE 42.4645% -50 - C1 -4QMY 8.0 STK24_HUMAN
71 PsiBlast_CBE 42.0345% -50 - C1 -4QNA 4.3 ?
74 PsiBlast_CBE 41.9245% -52 - C1 -4QMX 7.3 STK24_HUMAN
89 PsiBlast_CBE 41.8345% -53 - C1 -4U8Z 6.4 STK24_HUMAN
76 PsiBlast_CBE 41.6145% -52 - C1 -4QMV 7.2 STK24_HUMAN
81 PsiBlast_CBE 41.4845% -51 - C1 -4QMP 5.6 STK24_HUMAN
79 PsiBlast_CBE 41.4845% -50 - C1 -4QMS 6.6 STK24_HUMAN
78 PsiBlast_CBE 41.4345% -53 - C1 -4QMT 8.4 STK24_HUMAN
72 PsiBlast_CBE 41.3445% -53 - C1 -4QMZ 5.4 STK24_HUMAN
84 PsiBlast_CBE 41.1845% -49 - C1 -4QMM 5.6 STK24_HUMAN
70 PsiBlast_CBE 41.0945% -51 - C1 -4QO9 7.4 ?
77 PsiBlast_CBE 41.0445% -52 - C1 -4QMU 5.6 STK24_HUMAN
80 PsiBlast_CBE 40.7145% -51 - C1 -4QMQ 8.2 STK24_HUMAN
88 PsiBlast_CBE 40.6045% -52 - C1 -4W8D 5.8 STK24_HUMAN
83 PsiBlast_CBE 40.5245% -49 - C1 -4QMN 7.0 STK24_HUMAN
69 PsiBlast_CBE 40.4745% -48 - C1 -4QO9 6.6 ?
82 PsiBlast_CBE 40.4645% -50 - C1 -4QMO 5.8 STK24_HUMAN
85 PsiBlast_CBE 40.0345% -47 - C1 -4QML 4.7 STK24_HUMAN