@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PDK3_HUMAN: (2015-10-16 )
MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_6(2E0A)
PDK4_HUMAN
[Raw transfer]



ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]



ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]



ADP_A_5(1JM6)
PDK2_RAT
[Raw transfer]



ANP_A_5(2E0A)
PDK4_HUMAN
[Raw transfer]



ADP_B_6(3D2R)
PDK4_HUMAN
[Raw transfer]



ANP_A_5(4E01)
BCKD_RAT
[Raw transfer]



ATP_A_7(1Y8P)
PDK3_HUMAN
[Raw transfer]



ADP_A_4(2ZKJ)
PDK4_HUMAN
[Raw transfer]



ADP_A_4(2ZDY)
PDK4_HUMAN
[Raw transfer]



ANP_A_9(3CRL)
PDK2_RAT
[Raw transfer]



ADP_B_7(2ZKJ)
PDK4_HUMAN
[Raw transfer]



ANP_B_10(3CRL)
PDK2_RAT
[Raw transfer]



ACP_A_6(1I58)
CHEA_THEMA
[Raw transfer]



ADP_A_5(3D2R)
PDK4_HUMAN
[Raw transfer]



ADP_B_6(1JM6)
PDK2_RAT
[Raw transfer]



ADP_A_6(1GKZ)
BCKD_RAT
[Raw transfer]



P4A_B_4(2ZDX)
PDK4_HUMAN
[Raw transfer]



SZ6_A_4(4V25)
PDK2_HUMAN
[Raw transfer]



PV1_A_2(4MP2)
PDK2_HUMAN
[Raw transfer]



7TJ_A_5(4V26)
PDK2_HUMAN
[Raw transfer]



RDC_A_5(2Q8I)
PDK3_HUMAN
[Raw transfer]



P4A_A_3(2ZDX)
PDK4_HUMAN
[Raw transfer]



TLA_A_3(4MP2)
PDK2_HUMAN
[Raw transfer]
1 PsiBlast_PDB 98.88100%-112 - C4 -1Y8P 8.1 PDK3_HUMAN
2 PsiBlast_PDB 97.93100%-114 - C4 -2Q8I 5.8 PDK3_HUMAN
24 PsiBlast_CBE 88.6267%-110 - C4 -3CRL 5.6 PDK2_RAT
7 PsiBlast_PDB 87.8267%-110 - C4 -3CRL 5.5 PDK2_RAT
9 PsiBlast_PDB 87.7468%-108 - C4 -4MP2 3.9 PDK2_HUMAN
31 PsiBlast_CBE 86.6763%-106 - C4 -2ZKJ 8.1 PDK4_HUMAN
30 PsiBlast_CBE 86.5063%-110 - C4 -3D2R 7.8 PDK4_HUMAN
29 PsiBlast_CBE 85.8463%-106 - C4 -3D2R 7.9 PDK4_HUMAN
44 HHSearch 85.5963%-106 - C4 -2E0A 9.0 PDK4_HUMAN
20 PsiBlast_PDB 85.1563%-109 - C4 -2ZKJ 7.4 PDK4_HUMAN
5 PsiBlast_PDB 84.8967%-116 - C4 -1JM6 6.4 PDK2_RAT
10 PsiBlast_PDB 84.7167%-111 - C4 -4V25 4.8 PDK2_HUMAN
17 PsiBlast_PDB 84.7063%-104 - C4 -2E0A 9.0 PDK4_HUMAN
19 PsiBlast_PDB 84.5463%-102 - C4 -2ZDY 7.0 PDK4_HUMAN
8 PsiBlast_PDB 84.4166%-110 - C4 -4V26 6.3 PDK2_HUMAN
32 Fugue 84.2769%-112 - C4 -1JM6 6.3 PDK2_RAT
26 PsiBlast_CBE 84.2567%-111 - C4 -1JM6 6.8 PDK2_RAT
27 PsiBlast_CBE 84.1863%-105 - C4 -2ZDX 4.8 PDK4_HUMAN
28 PsiBlast_CBE 83.8263%-105 - C4 -2E0A 8.4 PDK4_HUMAN
18 PsiBlast_PDB 82.8263%-108 - C4 -2ZDX 4.7 PDK4_HUMAN
45 HHSearch 68.4730%-103 - C4 -4E01 6.6 BCKD_RAT
33 Fugue 62.9831% -91 - C4 -1GKZ 4.5 BCKD_RAT