@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PK3CA_HUMAN: (2015-10-17 )
MPPRPSSGELWGIHLMPPRILVECLLPNGMIVTLECLREATLITIKHELFKEARKYPLHQLLQDESSYIFVSVTQEAEREEFFDETRRLCDLRLFQPFLKVIEPVGNREEKILNREIGFAIGMPVCEFDMVKDPEVQDFRRNILNVCKEAVDLRDLNSPHSRAMYVYPPNVESSPELPKHIYNKLDKGQIIVVIWVIVSPNNDKQKYTLKINHDCVPEQVIAEAIRKKTRSMLLSSEQLKLCVLEYQGKYILKVCGCDEYFLEKYPLSQYKYIRSCIMLGRMPNLMLMAKESLYSQLPMDCFTMPSYSRRISTATPYMNGETSTKSLWVINSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWPVPHGLEDLLNPIGVTGSNPNKETPCLELEFDWFSSVVKFPDMSVIEEHANWSVSREAGFSYSHAGLSNRLARDNELRENDKEQLKAISTRDPLSEITEQEKDFLWSHRHYCVTIPEILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAVRCLEKYLTDDKLSQYLIQLVQVLKYEQYLDNLLVRFLLKKALTNQRIGHFFFWHLKSEMHNKTVSQRFGLLLESYCRACGMYLKHLNRQVEAMEKLINLTDILKQEKKDETQKVQMKFLVEQMRRPDFMDALQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNWENPDIMSELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQIQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFDDIAYIRKTLALDKTEQEALEYFMKQMNDAHHGGWTTKMDWIFHTIKQHALN

Atome Classification :

(7 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ML9_A_2(4TV3)
PK3CA_HUMAN
[Raw transfer]



GD9_A_3(2Y3A)
PK3CB_MOUSE
[Raw transfer]



ATP_A_2(1E8X)
PK3CG_PIG
[Raw transfer]



0TB_A_2(4FAD)
PK3CG_HUMAN
[Raw transfer]



QK0_A_5(3QK0)
PK3CG_HUMAN
[Raw transfer]



093_A_3(2X6J)
?
[Raw transfer]



ML8_A_2(3ML8)
PK3CG_HUMAN
[Raw transfer]



2UG_B_3(4PH4)
PK3C3_HUMAN
[Raw transfer]



X6K_A_5(2X6K)
?
[Raw transfer]



090_A_3(2X6I)
?
[Raw transfer]



FJY_A_5(4FJY)
PK3CG_HUMAN
[Raw transfer]
5 PsiBlast_PDB 93.18100%-124 - C3 -4TV3 Error PK3CA_HUMAN
7 PsiBlast_PDB 74.7839%-109 - C3 -2Y3A Error PK3CB_MOUSE
10 PsiBlast_PDB 73.6035%-107 - C3 -4FAD 7.4 PK3CG_HUMAN
22 Fugue 73.1536% -99 * C3 *1E8X 4.9 PK3CG_PIG
8 PsiBlast_PDB 72.9435%-107 - C3 -3QK0 8.0 PK3CG_HUMAN
9 PsiBlast_PDB 72.8835%-106 - C3 -4FJY 8.4 PK3CG_HUMAN
11 PsiBlast_PDB 71.6235%-106 - C3 -3ML8 7.8 PK3CG_HUMAN