@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PLK2_HUMAN: (2015-10-17 )
MELLRTITYQPAASTKMCEQALGKGCGADSKKKRPPQPPEESQPPQSQAQVPPAAPHHHHHHSHSGPEISRIIVDPTTGKRYCRGKVLGKGGFAKCYEMTDLTNNKVYAAKIIPHSRVAKPHQREKIDKEIELHRILHHKHVVQFYHYFEDKENIYILLEYCSRRSMAHILKARKVLTEPEVRYYLRQIVSGLKYLHEQEILHRDLKLGNFFINEAMELKVGDFGLAARLEPLEHRRRTICGTPNYLSPEVLNKQGHGCESDIWALGCVMYTMLLGRPPFETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPEDRPSLDDIIRHDFFLQGFTPDRLSSSCCHTVPDFHLSSPAKNFFKKAAAALFGGKKDKARYIDTHNRVSKEDEDIYKLRHDLKKTSITQQPSKHRTDEELQPPTTTVARSGTPAVENKQQIGDAIRMIVRGTLGSCSSSSECLEDSTMGSVADTVARVLRGCLENMPEADCIPKEQLSTSFQWVTKWVDYSNKYGFGYQLSDHTVGVLFNNGAHMSLLPDKKTVHYYAELGQCSVFPATDAPEQFISQVTVLKYFSHYMEENLMDGGDLPSVTDIRRPRLYLLQWLKSDKALMMLFNDGTFQVNFYHDHTKIIICSQNEEYLLTYINEDRISTTFRLTTLLMSGCSSELKNRMEYALNMLLQRCN

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

R78_A_2(4I5M)
PLK2_HUMAN
[Raw transfer]




1C8_A_2(4I6H)
PLK2_HUMAN
[Raw transfer]




1D1_A_2(4I5P)
PLK2_HUMAN
[Raw transfer]




1D1_A_2(4I5P)
PLK2_HUMAN
[Raw transfer]




1C7_A_2(4I6F)
PLK2_HUMAN
[Raw transfer]




664_A_4(4A4O)
PLK1_HUMAN
[Raw transfer]




2FR_A_2(3DBC)
?
[Raw transfer]




939_A_4(4A4L)
PLK1_HUMAN
[Raw transfer]




ADP_A_4(4DEE)
AURKA_HUMAN
[Raw transfer]




R78_A_3(2RKU)
PLK1_HUMAN
[Raw transfer]




R78_A_3(2RKU)
PLK1_HUMAN
[Raw transfer]




FRS_A_2(3DB6)
?
[Raw transfer]




11G_A_2(4I6B)
PLK2_HUMAN
[Raw transfer]




ADP_A_5(1MQ4)
AURKA_HUMAN
[Raw transfer]




GOL_A_11(3FC2)
PLK1_HUMAN
[Raw transfer]




A0P_A_3(4B8L)
AUKBA_XENLA
[Raw transfer]




626_A_5(2OWB)
PLK1_HUMAN
[Raw transfer]




937_A_2(2YAC)
PLK1_HUMAN
[Raw transfer]




626_A_5(2OWB)
PLK1_HUMAN
[Raw transfer]




NHU_A_2(4DED)
AURKA_HUMAN
[Raw transfer]




ADP_A_2(3D5W)
?
[Raw transfer]




9ZP_A_2(4B6L)
PLK3_HUMAN
[Raw transfer]




9ZP_A_2(4B6L)
PLK3_HUMAN
[Raw transfer]




3FR_A_2(3DBD)
?
[Raw transfer]




N13_B_4(3W18)
AURKA_HUMAN
[Raw transfer]




EML_A_3(3MYG)
AURKA_HUMAN
[Raw transfer]




1J3_A_2(4J52)
PLK1_HUMAN
[Raw transfer]




IBI_A_2(3FC2)
PLK1_HUMAN
[Raw transfer]




5FR_A_2(3DBF)
?
[Raw transfer]




NHI_A_5(4DEA)
AURKA_HUMAN
[Raw transfer]




4FR_A_2(3DBE)
?
[Raw transfer]




0C9_A_2(3UP7)
AURKA_HUMAN
[Raw transfer]




ACP_A_5(4C3P)
AURKA_HUMAN
[Raw transfer]




VX6_A_3(4AF3)
AURKB_HUMAN
[Raw transfer]




ANP_A_7(2OU7)
PLK1_HUMAN
[Raw transfer]




1J4_A_4(4J53)
PLK1_HUMAN
[Raw transfer]




ACP_D_6(4C3P)
AURKA_HUMAN
[Raw transfer]




0C5_A_3(3UOJ)
AURKA_HUMAN
[Raw transfer]




0C8_A_2(3UP2)
AURKA_HUMAN
[Raw transfer]




ANP_A_7(3COK)
PLK4_HUMAN
[Raw transfer]




0C5_B_4(3UOJ)
AURKA_HUMAN
[Raw transfer]




CC3_E_5(2NP8)
AURKA_HUMAN
[Raw transfer]




0C0_A_2(3UO4)
AURKA_HUMAN
[Raw transfer]




1FR_A_2(3DB8)
?
[Raw transfer]




4J7_A_2(4YUR)
PLK4_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




XU2_A_2(4JAI)
AURKA_HUMAN
[Raw transfer]




0C3_A_2(3UOD)
AURKA_HUMAN
[Raw transfer]




N13_A_3(3W18)
AURKA_HUMAN
[Raw transfer]




631_A_2(4JXF)
PLK4_HUMAN
[Raw transfer]




QMN_A_3(4UZD)
AURKA_HUMAN
[Raw transfer]




0C4_B_7(3UOH)
AURKA_HUMAN
[Raw transfer]




KWT_A_2(3D5X)
?
[Raw transfer]




ADN_B_2(1MUO)
AURKA_HUMAN
[Raw transfer]




ADN_A_2(4O0S)
AURKA_HUMAN
[Raw transfer]




ZZL_A_2(2WTW)
AURKA_HUMAN
[Raw transfer]




NHJ_A_2(4DEB)
AURKA_HUMAN
[Raw transfer]




EDO_A_4(3FC2)
PLK1_HUMAN
[Raw transfer]




TAR_A_8(2RKU)
PLK1_HUMAN
[Raw transfer]




EDO_A_5(2W5A)
NEK2_HUMAN
[Raw transfer]




EDO_A_3(4JXF)
PLK4_HUMAN
[Raw transfer]




EDO_A_3(3FC2)
PLK1_HUMAN
[Raw transfer]




2 PsiBlast_PDB 88.4597%-115 - C1 -4I6B 5.6 PLK2_HUMAN
113 HHSearch 87.6898%-115 - C1 -4I5P 7.0 PLK2_HUMAN
3 PsiBlast_PDB 87.4997%-114 - C1 -4I6F 8.9 PLK2_HUMAN
5 PsiBlast_PDB 87.4397%-115 - C1 -4I5P 7.0 PLK2_HUMAN
1 PsiBlast_PDB 86.4597%-115 - C1 -4I6H 7.9 PLK2_HUMAN
4 PsiBlast_PDB 86.0997%-117 - C1 -4I5M 8.6 PLK2_HUMAN
114 HHSearch 78.4168%-109 - C1 -4B6L 8.5 PLK3_HUMAN
29 PsiBlast_CBE 78.3950%-116 - C1 -2RKU 6.5 PLK1_HUMAN
27 PsiBlast_CBE 78.3550%-119 - C1 -2OU7 3.4 PLK1_HUMAN
8 PsiBlast_PDB 78.1767%-109 - C1 -4B6L 8.5 PLK3_HUMAN
26 PsiBlast_CBE 77.8450%-119 - C1 -2OWB 8.3 PLK1_HUMAN
115 HHSearch 77.7550%-116 - C1 -2RKU 6.5 PLK1_HUMAN
30 PsiBlast_CBE 77.6050%-117 - C1 -4J53 6.7 PLK1_HUMAN
25 PsiBlast_CBE 77.4350%-118 - C1 -3FC2 5.8 PLK1_HUMAN
10 PsiBlast_PDB 77.2948%-114 - C1 -3D5W 5.3 ?
116 HHSearch 77.2850%-119 - C1 -2OWB 8.3 PLK1_HUMAN
15 PsiBlast_PDB 77.0950%-117 - C1 -3DB6 7.3 ?
22 PsiBlast_CBE 76.7650%-113 - C1 -4A4O 7.3 PLK1_HUMAN
24 PsiBlast_CBE 76.6850%-115 - C1 -2YAC 7.3 PLK1_HUMAN
31 PsiBlast_CBE 76.2450%-117 - C1 -4J52 6.9 PLK1_HUMAN
23 PsiBlast_CBE 76.1050%-114 - C1 -4A4L 5.7 PLK1_HUMAN
16 PsiBlast_PDB 75.9350%-118 - C1 -3D5X 4.1 ?
14 PsiBlast_PDB 75.5848%-126 - C1 -3DBD 9.0 ?
18 PsiBlast_PDB 75.2650%-127 - C1 -3DBF 6.6 ?
13 PsiBlast_PDB 74.7348%-125 - C1 -3DBC 7.6 ?
17 PsiBlast_PDB 74.3850%-116 - C1 -3DBE 6.4 ?
12 PsiBlast_PDB 73.6548%-125 - C1 -3DB8 7.9 ?
32 PsiBlast_CBE 63.3641%-135 - C1 -4YUR 1.9 PLK4_HUMAN
126 HHSearch 62.0730%-111 - C1 -2W5A 5.0 NEK2_HUMAN
34 PsiBlast_CBE 60.3341%-131 - C1 -4JXF 3.4 PLK4_HUMAN
85 PsiBlast_CBE 60.0531%-114 - C1 -3MYG 4.7 AURKA_HUMAN
63 PsiBlast_CBE 59.3731%-113 - C1 -4UZD 8.3 AURKA_HUMAN
58 PsiBlast_CBE 59.2231%-119 - C1 -3W18 8.0 AURKA_HUMAN
39 PsiBlast_CBE 58.4431%-114 - C1 -2WTW 5.7 AURKA_HUMAN
61 PsiBlast_CBE 58.1131%-116 - C1 -4JAI 6.5 AURKA_HUMAN
57 PsiBlast_CBE 57.9131%-120 - C1 -3W18 7.5 AURKA_HUMAN
76 PsiBlast_CBE 57.6631%-110 - C1 -3UOH 5.8 AURKA_HUMAN
33 PsiBlast_CBE 57.6041%-121 - C1 -3COK 5.9 PLK4_HUMAN
55 PsiBlast_CBE 57.3131%-121 - C1 -4C3P 4.5 AURKA_HUMAN
78 PsiBlast_CBE 57.0631%-105 - C1 -3UOD 4.5 AURKA_HUMAN
69 PsiBlast_CBE 56.8731%-108 - C1 -3UP2 4.7 AURKA_HUMAN
98 PsiBlast_CBE 56.8031%-113 - C1 -4B8L 5.2 AUKBA_XENLA
75 PsiBlast_CBE 56.6431%-105 - C1 -3UOJ 4.8 AURKA_HUMAN
64 PsiBlast_CBE 56.1831%-107 - C1 -4DEE 5.3 AURKA_HUMAN
67 PsiBlast_CBE 56.1431%-106 - C1 -4DEA 5.4 AURKA_HUMAN
82 PsiBlast_CBE 56.0531%-109 - C1 -3UO4 5.8 AURKA_HUMAN
56 PsiBlast_CBE 56.0531%-112 - C1 -4C3P 5.0 AURKA_HUMAN
94 PsiBlast_CBE 55.5532%-110 - C1 -4AF3 2.3 AURKB_HUMAN
54 PsiBlast_CBE 55.4231%-106 - C1 -4O0S 3.9 AURKA_HUMAN
88 PsiBlast_CBE 55.0131%-102 - C1 -1MQ4 4.7 AURKA_HUMAN
68 PsiBlast_CBE 54.8531%-102 - C1 -3UP7 6.4 AURKA_HUMAN
74 PsiBlast_CBE 54.7631%-105 - C1 -3UOJ 4.8 AURKA_HUMAN
44 PsiBlast_CBE 53.7531%-113 - C1 -1MUO 3.8 AURKA_HUMAN
66 PsiBlast_CBE 53.5831%-106 - C1 -4DEB 4.6 AURKA_HUMAN
38 PsiBlast_CBE 53.5031%-104 - C1 -4CZU - CIPKN_ARATH
65 PsiBlast_CBE 52.8031%-100 - C1 -4DED 5.7 AURKA_HUMAN
87 PsiBlast_CBE 22.3431% -68 - C1 -2NP8 6.3 AURKA_HUMAN