@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PMYT1_HUMAN: (2015-10-17 )
MLERPPALAMPMPTEGTPPPLSGTPIPVPAYFRHAEPGFSLKRPRGLSRSLPPPPPAKGSIPISRLFPPRTPGWHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQPRAWGVLWCMAAEALSRGWALWQALLALLCWLWHGLAHPASWLQPLGPPATPPGSPPCSLLLDSSLSSNWDDDSLGPSLSPEAVLARTVGSTSTPRSRCTPRDALDLSDINSEPPRGSFPSFEPRNLLSLFEDTLDPT

Atome Classification :

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_4(1PHK)
PHKG1_RABIT
[Raw transfer]



ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]



ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]



DRK_A_2(3F3Z)
?
[Raw transfer]



274_A_10(2J7T)
STK10_HUMAN
[Raw transfer]



ADP_A_7(2RIO)
IRE1_YEAST
[Raw transfer]



38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]



839_A_2(2IN6)

[Raw transfer]



ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]



STU_A_2(3FME)
MP2K6_HUMAN
[Raw transfer]



770_A_3(2Z2W)

[Raw transfer]



GOL_C_3(1ZY4)
GCN2_YEAST
[Raw transfer]



P91_A_3(3CQE)

[Raw transfer]



0WH_A_3(4G31)

[Raw transfer]



396_A_3(3BI6)

[Raw transfer]



VGG_A_2(2WEI)
?
[Raw transfer]



STU_A_2(3A61)
KS6B1_HUMAN
[Raw transfer]



STU_A_2(3A62)
KS6B1_HUMAN
[Raw transfer]



EDO_A_3(3P1A)
PMYT1_HUMAN
[Raw transfer]



9ZP_A_2(4B6L)
PLK3_HUMAN
[Raw transfer]



EDO_A_3(3P1A)
PMYT1_HUMAN
[Raw transfer]



STU_B_4(3A60)
KS6B1_HUMAN
[Raw transfer]



MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]



1CK_A_2(4EK4)
CDK2_HUMAN
[Raw transfer]
1 PsiBlast_PDB 93.31100%-103 - C1 -3P1A 2.8 PMYT1_HUMAN
34 HHSearch 93.1799%-103 - C1 -3P1A 2.8 PMYT1_HUMAN
41 HHSearch 68.6031%-110 - C1 -4G31 9.9
3 PsiBlast_PDB 63.6833%-102 - C1 -2IN6 7.6
2 PsiBlast_PDB 63.4133%-102 - C1 -2Z2W 7.7
5 PsiBlast_PDB 63.0133%-106 - C1 -3BI6 8.4
7 PsiBlast_PDB 62.4833%-104 - C1 -3CQE 7.1
23 PsiBlast_CBE 55.2831% -89 - C1 -4B6L 9.9 PLK3_HUMAN
18 PsiBlast_PDB 54.5533% -90 - C1 -3A62 5.9 KS6B1_HUMAN
17 PsiBlast_PDB 48.9733% -81 - C1 -3A61 6.6 KS6B1_HUMAN
21 PsiBlast_CBE 44.4333% -78 - C1 -3A60 6.4 KS6B1_HUMAN
52 HHSearch 25.6331% -13 - C1 -4EK4 3.1 CDK2_HUMAN