@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : RIPK1_HUMAN: (2015-10-18 )
MQPDMSLNVIKMKSSDFLESAELDSGGFGKVSLCFHRTQGLMIMKTVYKGPNCIEHNEALLEEAKMMNRLRHSRVVKLLGVIIEEGKYSLVMEYMEKGNLMHVLKAEMSTPLSVKGRIILEIIEGMCYLHGKGVIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLNNEEHNELREVDGTAKKNGGTLYYMAPEHLNDVNAKPTEKSDVYSFAVVLWAIFANKEPYENAICEQQLIMCIKSGNRPDVDDITEYCPREIISLMKLCWEANPEARPTFPGIEEKFRPFYLSQLEESVEEDVKSLKKEYSNENAVVKRMQSLQLDCVAVPSSRSNSATEQPGSLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYHLYGSRMDRQTKQQPRQNVAYNREEERRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASHGNAVHQPSGLTSQPQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMPSLHNIPVPETNYLGNTPTMPFSSLPPTDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKYQAIFDNTTSLTDKHLDPIRENLGKHWKNCARKLGFTQSQIDEIDHDYERDGLKEKVYQMLQKWVMREGIKGATVGKLAQALHQCSRIDLLSSLIYVSQN

Atome Classification :

(75 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

Q1A_A_4(4NEU)
RIPK1_HUMAN
[Raw transfer]




Q1A_A_4(4NEU)
RIPK1_HUMAN
[Raw transfer]




0LI_A_3(4C8B)
RIPK2_HUMAN
[Raw transfer]




1N8_D_4(2OG8)
?
[Raw transfer]




242_D_4(2OFV)
?
[Raw transfer]




351_A_3(3ETA)
INSR_HUMAN
[Raw transfer]




242_C_3(2OFV)
LCK_HUMAN
[Raw transfer]




AM6_A_2(3BYU)
LCK_HUMAN
[Raw transfer]




351_B_4(3ETA)

[Raw transfer]




AM0_A_4(3BYM)
LCK_HUMAN
[Raw transfer]




KSF_A_5(2ZM1)
LCK_HUMAN
[Raw transfer]




9NH_A_2(3B2W)
LCK_HUMAN
[Raw transfer]




LGX_A_2(3NW5)

[Raw transfer]




KSL_A_3(2ZYB)
LCK_HUMAN
[Raw transfer]




7KW_A_2(4C3F)
LCK_HUMAN
[Raw transfer]




925_A_4(3KXZ)
LCK_HUMAN
[Raw transfer]




1BU_B_4(3F3W)
SRC_CHICK
[Raw transfer]




1N9_B_3(2OFU)
LCK_HUMAN
[Raw transfer]




1BU_A_3(3F3W)
SRC_CHICK
[Raw transfer]




0LI_B_5(4C8B)
RIPK2_HUMAN
[Raw transfer]




LGV_A_2(3NW7)

[Raw transfer]




EBI_A_2(3I81)

[Raw transfer]




STI_A_2(2PL0)
LCK_HUMAN
[Raw transfer]




0LI_A_2(4TYJ)

[Raw transfer]




0LI_A_3(4UXQ)

[Raw transfer]




37O_A_2(4QQC)

[Raw transfer]




AM9_A_3(3BYO)
?
[Raw transfer]




547_B_2(2OF2)
LCK_HUMAN
[Raw transfer]




ANP_A_3(4M69)
RIPK3_MOUSE
[Raw transfer]




KSK_A_4(3AC8)
LCK_HUMAN
[Raw transfer]




KSM_A_5(2ZM4)
LCK_HUMAN
[Raw transfer]




0LI_A_3(4QRC)

[Raw transfer]




40M_A_3(4XCU)

[Raw transfer]




LGW_A_2(3NW6)

[Raw transfer]




37O_A_2(4QQ5)

[Raw transfer]




KZM_A_5(3AC5)
LCK_HUMAN
[Raw transfer]




13L_A_2(4HCU)

[Raw transfer]




ANP_B_8(1AD5)
HCK_HUMAN
[Raw transfer]




1BM_A_2(2HK5)
HCK_HUMAN
[Raw transfer]




01P_B_6(3QQU)
IGF1R_HUMAN
[Raw transfer]




5LK_A_2(3MPM)
LCK_HUMAN
[Raw transfer]




979_B_2(2OF4)
LCK_HUMAN
[Raw transfer]




01P_A_5(3QQU)
IGF1R_HUMAN
[Raw transfer]




STU_X_2(3A4O)
LYN_HUMAN
[Raw transfer]




01P_D_8(3QQU)

[Raw transfer]




01P_C_7(3QQU)
IGF1R_HUMAN
[Raw transfer]




FI3_A_2(4R6V)

[Raw transfer]




1HX_A_3(4ITJ)
RIPK1_HUMAN
[Raw transfer]




1HW_A_3(4ITI)
RIPK1_HUMAN
[Raw transfer]




ANP_E_5(1QPC)
?
[Raw transfer]




1HX_A_3(4ITJ)
RIPK1_HUMAN
[Raw transfer]




56G_A_4(5D11)
?
[Raw transfer]




STU_C_3(1QPJ)
LCK_HUMAN
[Raw transfer]




1HW_B_4(4ITI)
RIPK1_HUMAN
[Raw transfer]




1HX_B_9(4ITJ)
RIPK1_HUMAN
[Raw transfer]




PP2_A_5(1QPE)
LCK_HUMAN
[Raw transfer]




G97_B_4(5D12)
?
[Raw transfer]




PDR_A_5(3LVP)
IGF1R_HUMAN
[Raw transfer]




KSE_A_6(3AC2)
LCK_HUMAN
[Raw transfer]




BMI_B_2(2OJ9)

[Raw transfer]




ANP_B_9(1JQH)
IGF1R_HUMAN
[Raw transfer]




38O_A_2(4TYI)

[Raw transfer]




KSS_A_5(3ACJ)
LCK_HUMAN
[Raw transfer]




DYK_A_3(4D2R)

[Raw transfer]




KSR_A_5(3ACK)
LCK_HUMAN
[Raw transfer]




56G_B_6(5D11)
?
[Raw transfer]




KSH_A_4(3AC3)
LCK_HUMAN
[Raw transfer]




QUE_B_6(2HCK)
HCK_HUMAN
[Raw transfer]




KZI_A_6(3AC1)
LCK_HUMAN
[Raw transfer]




EDO_F_6(1QPC)
?
[Raw transfer]




KBM_A_6(3AD4)
LCK_HUMAN
[Raw transfer]




KZL_A_5(3AC4)
LCK_HUMAN
[Raw transfer]




CCX_B_7(3LW0)
IGF1R_HUMAN
[Raw transfer]




CCX_A_5(3LW0)
IGF1R_HUMAN
[Raw transfer]




EDO_A_3(3MPM)
LCK_HUMAN
[Raw transfer]




96 HHSearch 95.42100%-108 - C1 -4NEU 10.1 RIPK1_HUMAN
1 PsiBlast_PDB 95.42100%-108 - C1 -4NEU 10.1 RIPK1_HUMAN
97 HHSearch 94.1099%-123 - C1 -4ITJ 7.8 RIPK1_HUMAN
3 PsiBlast_PDB 93.9098%-123 - C1 -4ITJ 7.8 RIPK1_HUMAN
21 PsiBlast_CBE 92.3098%-113 - C1 -4ITJ 7.9 RIPK1_HUMAN
2 PsiBlast_PDB 92.0598%-124 - C1 -4ITI 8.4 RIPK1_HUMAN
22 PsiBlast_CBE 90.0298%-121 - C1 -4ITI 7.1 RIPK1_HUMAN
98 HHSearch 72.1830%-114 - C1 -4C8B 9.9 RIPK2_HUMAN
23 PsiBlast_CBE 66.4932%-122 - C1 -4C8B 9.0 RIPK2_HUMAN
43 PsiBlast_CBE 63.1731% -96 - C1 -3LVP 4.6 IGF1R_HUMAN
30 PsiBlast_CBE 62.8131%-103 - C1 -1QPE 5.0 LCK_HUMAN
28 PsiBlast_CBE 62.5931%-113 - C1 -2OFV 7.3 LCK_HUMAN
38 PsiBlast_CBE 62.5731%-103 - C1 -3BYO 7.9 ?
31 PsiBlast_CBE 62.4931%-100 - C1 -1QPC 4.2 ?
24 PsiBlast_CBE 62.3931% -98 - C1 -2PL0 5.8 LCK_HUMAN
113 HHSearch 62.3030% -99 - C1 -4HCU 8.2
36 PsiBlast_CBE 62.2331%-105 - C1 -2OG8 7.4 ?
9 PsiBlast_PDB 62.2231%-101 - C1 -2ZM1 5.4 LCK_HUMAN
25 PsiBlast_CBE 61.7731%-110 - C1 -3BYU 8.8 LCK_HUMAN
14 PsiBlast_PDB 61.7631%-102 - C1 -3AC3 4.9 LCK_HUMAN
10 PsiBlast_PDB 61.4431% -99 - C1 -2ZM4 6.6 LCK_HUMAN
29 PsiBlast_CBE 61.3931%-101 - C1 -1QPJ 5.1 LCK_HUMAN
16 PsiBlast_PDB 61.3931% -99 - C1 -3AC5 5.6 LCK_HUMAN
11 PsiBlast_PDB 61.3631%-102 - C1 -2ZYB 5.8 LCK_HUMAN
13 PsiBlast_PDB 61.0431%-104 - C1 -3AC2 4.8 LCK_HUMAN
15 PsiBlast_PDB 60.9731% -98 - C1 -3AC4 5.4 LCK_HUMAN
20 PsiBlast_PDB 60.9531%-101 - C1 -3AD4 4.9 LCK_HUMAN
64 PsiBlast_CBE 60.9231%-109 - C1 -2HCK 1.4 HCK_HUMAN
32 PsiBlast_CBE 60.9131%-102 - C1 -2OFU 7.7 LCK_HUMAN
33 PsiBlast_CBE 60.8731% -98 - C1 -2OF4 5.7 LCK_HUMAN
19 PsiBlast_PDB 60.8431% -98 - C1 -3ACK 5.2 LCK_HUMAN
34 PsiBlast_CBE 60.8331% -99 - C1 -2OF2 5.7 LCK_HUMAN
35 PsiBlast_CBE 60.8231%-101 - C1 -3BYM 7.3 LCK_HUMAN
18 PsiBlast_PDB 60.7631%-102 - C1 -3ACJ 4.3 LCK_HUMAN
12 PsiBlast_PDB 60.7231% -98 - C1 -3AC1 4.0 LCK_HUMAN
65 PsiBlast_CBE 60.5131%-107 - C1 -1AD5 4.2 HCK_HUMAN
27 PsiBlast_CBE 60.3731%-101 - C1 -2OFV 6.5 ?
26 PsiBlast_CBE 60.3131%-103 - C1 -3B2W 9.7 LCK_HUMAN
17 PsiBlast_PDB 60.2031% -96 - C1 -3AC8 3.4 LCK_HUMAN
4 PsiBlast_PDB 60.1331% -83 - C1 -4M69 6.1 RIPK3_MOUSE
46 PsiBlast_CBE 59.3431% -78 - C1 -3NW5 6.8
8 PsiBlast_PDB 59.1731% -95 - C1 -3KXZ 7.8 LCK_HUMAN
44 PsiBlast_CBE 58.7931% -78 - C1 -3NW7 5.6
40 PsiBlast_CBE 58.7131% -92 - C1 -3MPM 6.6 LCK_HUMAN
45 PsiBlast_CBE 58.3231% -76 - C1 -3NW6 6.2
42 PsiBlast_CBE 57.4031% -76 - C1 -1JQH 4.4 IGF1R_HUMAN
39 PsiBlast_CBE 56.9931% -93 - C1 -4C3F 6.9 LCK_HUMAN
52 PsiBlast_CBE 56.9431% -77 - C1 -4D2R 5.0
47 PsiBlast_CBE 56.9231% -76 - C1 -2OJ9 7.1
68 PsiBlast_CBE 56.7732%-100 - C1 -2HK5 6.5 HCK_HUMAN
53 PsiBlast_CBE 56.4831% -80 - C1 -3I81 5.3
6 PsiBlast_PDB 56.3631% -97 - C1 -3A4O 7.6 LYN_HUMAN
57 PsiBlast_CBE 56.0031% -78 - C1 -3LW0 6.4 IGF1R_HUMAN
55 PsiBlast_CBE 55.5231% -78 - C1 -3LW0 - IGF1R_HUMAN
51 PsiBlast_CBE 55.4931% -80 - C1 -3QQU 5.0 IGF1R_HUMAN
69 PsiBlast_CBE 55.3633% -99 - C1 -4XCU 7.5
73 PsiBlast_CBE 55.3031%-104 - C1 -5D11 4.9 ?
74 PsiBlast_CBE 55.1031%-103 - C1 -3F3W 10.0 SRC_CHICK
72 PsiBlast_CBE 55.0431%-104 - C1 -5D11 4.8 ?
54 PsiBlast_CBE 54.7231% -77 - C1 -3LW0 -
50 PsiBlast_CBE 54.7231% -74 - C1 -3QQU 6.0 IGF1R_HUMAN
85 PsiBlast_CBE 54.6132% -99 - C1 -4QQC 6.8
48 PsiBlast_CBE 54.6031% -78 - C1 -3QQU 5.3
49 PsiBlast_CBE 54.5231% -77 - C1 -3QQU 6.5 IGF1R_HUMAN
56 PsiBlast_CBE 54.1131% -79 - C1 -3LW0 6.7 IGF1R_HUMAN
75 PsiBlast_CBE 54.0431% -95 - C1 -3F3W 9.6 SRC_CHICK
81 PsiBlast_CBE 53.6632% -93 - C1 -4R6V 5.5
83 PsiBlast_CBE 53.3032% -86 - C1 -4QRC 9.4
78 PsiBlast_CBE 52.3732% -90 - C1 -4TYI 4.4
82 PsiBlast_CBE 52.3332% -95 - C1 -4QQ5 6.7
70 PsiBlast_CBE 51.8732% -83 - C1 -4UXQ 9.7
71 PsiBlast_CBE 51.5531%-101 - C1 -5D12 5.6 ?
77 PsiBlast_CBE 51.2632% -98 - C1 -4TYJ 9.5
60 PsiBlast_CBE 50.2332% -78 - C1 -3ETA 10.2 INSR_HUMAN
59 PsiBlast_CBE 49.7432% -78 - C1 -3ETA 10.2