@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : RON_HUMAN: (2015-10-18 )
MELLPPLPQSFLLLLLLPAKPAAGEDWQCPRTPYAASRDFDVKYVVPSFSAGGLVQAMVTYEGDRNESAVFVAIRNRLHVLGPDLKSVQSLATGPAGDPGCQTCAACGPGPHGPPGDTDTKVLVLDPALPALVSCGSSLQGRCFLHDLEPQGTAVHLAAPACLFSAHHNRPDDCPDCVASPLGTRVTVVEQGQASYFYVASSLDAAVAASFSPRSVSIRRLKADASGFAPGFVALSVLPKHLVSYSIEYVHSFHTGAFVYFLTVQPASVTDDPSALHTRLARLSATEPELGDYRELVLDCRFAPKRRRRGAPEGGQPYPVLRVAHSAPVGAQLATELSIAEGQEVLFGVFVTGKDGGPGVGPNSVVCAFPIDLLDTLIDEGVERCCESPVHPGLRRGLDFFQSPSFCPNPPGLEALSPNTSCRHFPLLVSSSFSRVDLFNGLLGPVQVTALYVTRLDNVTVAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQPVQRDVSRLGDHLLFASGDQVFQVPIQGPGCRHFLTCGRCLRAWHFMGCGWCGNMCGQQKECPGSWQQDHCPPKLTEFHPHSGPLRGSTRLTLCGSNFYLHPSGLVPEGTHQVTVGQSPCRPLPKDSSKLRPVPRKDFVEEFECELEPLGTQAVGPTNVSLTVTNMPPGKHFRVDGTSVLRGFSFMEPVLIAVQPLFGPRAGGTCLTLEGQSLSVGTSRAVLVNGTECLLARVSEGQLLCATPPGATVASVPLSLQVGGAQVPGSWTFQYREDPVVLSISPNCGYINSHITICGQHLTSAWHLVLSFHDGLRAVESRCERQLPEQQLCRLPEYVVRDPQGWVAGNLSARGDGAAGFTLPGFRFLPPPHPPSANLVPLKPEEHAIKFEYIGLGAVADCVGINVTVGGESCQHEFRGDMVVCPLPPSLQLGQDGAPLQVCVDGECHILGRVVRPGPDGVPQSTLLGILLPLLLLVAALATALVFSYWWRRKQLVLPPNLNDLASLDQTAGATPLPILYSGSDYRSGLALPAIDGLDSTTCVHGASFSDSEDESCVPLLRKESIQLRDLDSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARSMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWMALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHYVQLPATYMNLGPSTSHEMNVRPEQPQFSPMPGNVRRPRPLSEPPRPT

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

4K0_A_2(4AOI)

[Raw transfer]




SX8_A_3(3DKG)

[Raw transfer]




SX8_A_3(3DKF)

[Raw transfer]




3QT_A_3(3QTI)
MET_HUMAN
[Raw transfer]




3QT_B_5(3QTI)

[Raw transfer]




0JK_A_2(4DEH)

[Raw transfer]




0JL_A_2(4DEI)

[Raw transfer]




L5G_A_2(3CD8)

[Raw transfer]




3E8_A_2(4R1V)

[Raw transfer]




46G_A_2(4XMO)

[Raw transfer]




0JJ_A_2(4DEG)

[Raw transfer]




B2D_A_2(3I5N)

[Raw transfer]




44X_A_2(4XYF)

[Raw transfer]




LKG_A_2(3CCN)

[Raw transfer]




L1X_A_2(4EEV)

[Raw transfer]




0J8_A_2(4GG7)

[Raw transfer]




ATP_A_4(3DKC)

[Raw transfer]




1RU_C_10(4KNB)
MET_HUMAN
[Raw transfer]




0J3_A_2(4GG5)

[Raw transfer]




ZZY_A_2(2WD1)

[Raw transfer]




ANP_A_3(3PLS)

[Raw transfer]




044_A_2(3U6I)

[Raw transfer]




1RU_B_8(4KNB)
MET_HUMAN
[Raw transfer]




DWF_A_2(4MXC)

[Raw transfer]




AM8_A_2(2RFS)

[Raw transfer]




88Z_A_2(3LQ8)

[Raw transfer]




03X_A_2(3U6H)

[Raw transfer]




DFQ_A_5(3A4P)

[Raw transfer]




MT4_B_4(3EFK)

[Raw transfer]




3EH_A_2(4R1Y)

[Raw transfer]




MT3_B_4(3EFJ)

[Raw transfer]




319_A_2(3CTH)

[Raw transfer]




MT3_A_3(3EFJ)
MET_HUMAN
[Raw transfer]




CKK_A_2(3C1X)

[Raw transfer]




MT4_A_3(3EFK)
MET_HUMAN
[Raw transfer]




1FN_A_2(3CE3)

[Raw transfer]




353_A_2(3F82)

[Raw transfer]




1RU_D_11(4KNB)

[Raw transfer]




AM7_B_4(2RFN)

[Raw transfer]




L8V_A_2(3L8V)

[Raw transfer]




1RU_A_5(4KNB)
MET_HUMAN
[Raw transfer]




M97_B_4(3RHK)

[Raw transfer]




KSA_B_2(1R0P)

[Raw transfer]




AM7_A_3(2RFN)
MET_HUMAN
[Raw transfer]




320_A_2(3CTJ)

[Raw transfer]




M97_A_3(3RHK)
MET_HUMAN
[Raw transfer]




IHX_B_7(3F66)

[Raw transfer]




IHX_A_3(3F66)
MET_HUMAN
[Raw transfer]




GBL_B_8(3F66)

[Raw transfer]




GBL_A_4(3F66)
MET_HUMAN
[Raw transfer]




IPA_A_3(3A4P)

[Raw transfer]




GBL_A_3(4R1V)

[Raw transfer]




GBL_B_9(4KNB)
MET_HUMAN
[Raw transfer]




GBL_A_3(2WD1)

[Raw transfer]




3 PsiBlast_PDB 67.4699%-120 - C2 -3PLS 4.8
29 PsiBlast_CBE 66.7161%-122 - C2 -4XMO 6.6
37 PsiBlast_CBE 66.5861%-121 - C2 -3F66 6.6 MET_HUMAN
28 PsiBlast_CBE 66.4761%-121 - C2 -4XYF 6.7
31 PsiBlast_CBE 66.3361%-121 - C2 -4DEH 5.2
40 PsiBlast_CBE 66.3260%-122 - C2 -3RHK 9.4 MET_HUMAN
30 PsiBlast_CBE 65.9861%-122 - C2 -4DEI 5.9
17 PsiBlast_PDB 65.6661%-128 - C2 -2RFN 10.6 MET_HUMAN
32 PsiBlast_CBE 65.6261%-122 - C2 -4DEG 6.0
46 PsiBlast_CBE 65.4561%-122 - C2 -4AOI 5.5
27 PsiBlast_CBE 65.4361%-123 - C2 -2RFN 10.5
35 PsiBlast_CBE 65.2861%-122 - C2 -3I5N 6.0
33 PsiBlast_CBE 65.2661%-128 - C2 -3U6I 11.7
34 PsiBlast_CBE 65.1461%-124 - C2 -3U6H 11.2
26 PsiBlast_CBE 65.0361%-121 - C2 -3EFJ 10.7 MET_HUMAN
19 PsiBlast_PDB 64.9561%-119 - C2 -3CCN 5.0
4 PsiBlast_PDB 64.9459%-124 - C2 -3DKG 7.2
12 PsiBlast_PDB 64.7859%-121 - C2 -3DKF 5.1
24 PsiBlast_CBE 64.6161%-120 - C2 -3EFK 10.8 MET_HUMAN
16 PsiBlast_PDB 64.3659%-127 - C2 -3QTI 5.8 MET_HUMAN
23 PsiBlast_CBE 64.3061%-121 - C2 -3EFK 10.7
14 PsiBlast_PDB 64.2759%-121 - C2 -1R0P 8.9
39 PsiBlast_CBE 64.0260%-124 - C2 -3RHK 9.3
41 PsiBlast_CBE 63.6960%-123 - C2 -4EEV 11.9
20 PsiBlast_PDB 63.6461%-121 - C2 -3CD8 6.5
60 PsiBlast_CBE 63.6261%-119 - C2 -4R1V 7.0
42 PsiBlast_CBE 63.3960%-119 - C2 -4MXC 11.2
10 PsiBlast_PDB 63.2559%-119 - C2 -3L8V 9.4
38 PsiBlast_CBE 62.8861%-121 - C2 -3LQ8 11.2
36 PsiBlast_CBE 62.7261%-119 - C2 -3F66 6.4
59 PsiBlast_CBE 62.6662%-121 - C2 -4KNB 7.2 MET_HUMAN
54 PsiBlast_CBE 62.6361%-119 - C2 -4R1Y 5.7
5 PsiBlast_PDB 62.4059%-123 - C2 -3C1X 10.9
57 PsiBlast_CBE 62.2662%-119 - C2 -4KNB 7.5 MET_HUMAN
18 PsiBlast_PDB 62.1561%-116 - C2 -2RFS 6.5
25 PsiBlast_CBE 62.1461%-119 - C2 -3EFJ 9.8
9 PsiBlast_PDB 62.0259%-120 - C2 -3F82 10.8
55 PsiBlast_CBE 61.9461%-120 - C2 -2WD1 4.9
22 PsiBlast_CBE 61.4559%-124 - C2 -3QTI 5.8
58 PsiBlast_CBE 60.9862%-121 - C2 -4KNB 7.8 MET_HUMAN
13 PsiBlast_PDB 60.5959%-118 - C2 -3A4P 7.1
11 PsiBlast_PDB 60.5159%-114 - C2 -3DKC 6.7
8 PsiBlast_PDB 59.8859%-118 - C2 -3CE3 9.4
7 PsiBlast_PDB 59.0759%-117 - C2 -3CTJ 9.2
43 PsiBlast_CBE 58.9660%-110 - C2 -4GG7 5.3
56 PsiBlast_CBE 58.6662%-119 - C2 -4KNB 7.8
6 PsiBlast_PDB 58.5459%-119 - C2 -3CTH 8.4
44 PsiBlast_CBE 57.8760%-116 - C2 -4GG5 5.1