@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SIK1_HUMAN: (2015-10-19 )
MVIMSEFSADPAGQGQGQQKPLRVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDSSNLEKIYREVQLMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHDHHIVHRDLKTENLLLDGNMDIKLADFGFGNFYKSGEPLSTWCGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFMSQDCESLIRRMLVVDPARRITIAQIRQHRWMRAEPCLPGPACPAFSAHSYTSNLGDYDEQALGIMQTLGVDRQRTVESLQNSSYNHFAAIYYLLLERLKEYRNAQCARPGPARQPRPRSSDLSGLEVPQEGLSTDPFRPALLCPQPQTLVQSVLQAEMDCELQSSLQWPLFFPVDASCSGVFRPRPVSPSSLLDTAISEEARQGPGLEEEQDTQESLPSSTGRRHTLAEVSTRLSPLTAPCIVVSPSTTASPAEGTSSDSCLTFSASKSPAGLSGTPATQGLLGACSPVRLASPFLGSQSATPVLQAQGGLGGAVLLPVSFQEGRRASDTSLTQGLKAFRQQLRKTTRTKGFLGLNKIKGLARQVCQAPASRASRGGLSPFHAPAQSPGLHGGAAGSREGWSLLEEVLEQQRLLQLQHHPAAAPGCSQAPQPAPAPFVIAPCDGPGAAPLPSTLLTSGLPLLPPPLLQTGASPVASAAQLLDTHLHIGTGPTALPAVPPPRLARLAPGCEPLGLLQGDCEMEDLMPCSLGTFVLVQ

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




AK3_A_2(3D2I)
AURKA_MOUSE
[Raw transfer]




AK2_A_2(3D15)
AURKA_MOUSE
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




631_A_2(4JXF)
PLK4_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ADP_A_6(3C4Z)
RK_BOVIN
[Raw transfer]




AK6_A_2(3DJ6)
AURKA_MOUSE
[Raw transfer]




ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]




AK7_A_2(3DJ7)
AURKA_MOUSE
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




ANP_A_7(3COK)
PLK4_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




4J7_A_2(4YUR)
PLK4_HUMAN
[Raw transfer]




AK5_A_2(3DJ5)
AURKA_MOUSE
[Raw transfer]




B49_A_5(2Y7J)
PHKG2_HUMAN
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_B_10(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]




1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]




CPS_B_12(4CZT)
CIPKN_ARATH
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




CPS_C_16(4CZU)
CIPKN_ARATH
[Raw transfer]




EDO_A_3(4JXF)
PLK4_HUMAN
[Raw transfer]




17 PsiBlast_PDB 74.5347%-120 - C1 -3AQV 7.6 AAPK2_HUMAN
24 PsiBlast_CBE 69.5443%-108 - C1 -4CZT - CIPKN_ARATH
19 PsiBlast_PDB 69.3143%-107 - C1 -4CZT 4.3 CIPKN_ARATH
27 PsiBlast_CBE 69.2543%-109 - C1 -4CZU - CIPKN_ARATH
20 PsiBlast_PDB 68.0743%-109 - C1 -4CZU 5.2 CIPKN_ARATH
25 PsiBlast_CBE 67.8643%-114 - C1 -4CZT - CIPKN_ARATH
26 PsiBlast_CBE 67.8243%-109 - C1 -4CZT 5.5 CIPKN_ARATH
28 PsiBlast_CBE 67.4843%-114 - C1 -4CZU 4.7 CIPKN_ARATH
29 PsiBlast_CBE 67.2743%-109 - C1 -4CZU 5.0 CIPKN_ARATH
96 PsiBlast_CBE 65.4637%-128 * C1 *4FG7 4.5 KCC1A_HUMAN
110 PsiBlast_CBE 64.8032%-117 - C1 -3D2I 8.0 AURKA_MOUSE
93 PsiBlast_CBE 64.7438%-116 - C1 -2Y7J 6.1 PHKG2_HUMAN
112 PsiBlast_CBE 64.6538%-110 - C1 -4B4L 2.3 DAPK1_HUMAN
98 PsiBlast_CBE 64.1337%-132 - C1 -4FG8 5.7 KCC1A_HUMAN
107 PsiBlast_CBE 64.0232%-110 - C1 -3DJ7 8.2 AURKA_MOUSE
94 PsiBlast_CBE 63.9838%-116 - C1 -2Y7J 6.7 PHKG2_HUMAN
91 PsiBlast_CBE 63.9637%-109 - C1 -3MA6 4.6 ?
92 PsiBlast_CBE 63.6938%-114 - C1 -2Y7J 6.2 PHKG2_HUMAN
60 PsiBlast_CBE 63.4638%-107 - C1 -2WEI 7.2 ?
97 PsiBlast_CBE 63.4137%-126 - C1 -4FG8 4.2 KCC1A_HUMAN
111 PsiBlast_CBE 63.3432%-111 - C1 -3D15 8.1 AURKA_MOUSE
90 PsiBlast_CBE 63.1437%-107 - C1 -3MA6 5.9 ?
103 PsiBlast_CBE 61.8736%-130 - C1 -4YUR 5.5 PLK4_HUMAN
99 PsiBlast_CBE 61.6837%-126 - C1 -4FG9 5.7 KCC1A_HUMAN
100 PsiBlast_CBE 61.6037%-131 - C1 -4FG9 5.9 KCC1A_HUMAN
106 PsiBlast_CBE 61.4737%-124 - C1 -4JXF 9.9 PLK4_HUMAN
105 PsiBlast_CBE 59.6236%-129 - C1 -3COK 6.1 PLK4_HUMAN
108 PsiBlast_CBE 58.1232%-115 - C1 -3DJ6 9.7 AURKA_MOUSE
109 PsiBlast_CBE 57.9432%-117 - C1 -3DJ5 9.1 AURKA_MOUSE