@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SIK2_HUMAN: (2015-10-19 )
MVMADGPRHLQRGPVRVGFYDIEGTLGKGNFAVVKLGRHRITKTEVAIKIIDKSQLDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNNMNIKIADFGFGNFFKSGELLATWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKRLTIAQIKEHKWMLIEVPVQRPVLYPQEQENEPSIGEFNEQVLRLMHSLGIDQQKTIESLQNKSYNHFAAIYFLLVERLKSHRSSFPVEQRLDGRQRRPSTIAEQTVAKAQTVGLPVTMHSPNMRLLRSALLPQASNVEAFSFPASGCQAEAAFMEEECVDTPKVNGCLLDPVPPVLVRKGCQSLPSNMMETSIDEGLETEGEAEEDPAHAFEAFQSTRSGQRRHTLSEVTNQLVVMPGAGKIFSMNDSPSLDSVDSEYDMGSVQRDLNFLEDNPSLKDIMLANQPSPRMTSPFISLRPTNPAMQALSSQKREVHNRSPVSFREGRRASDTSLTQGIVAFRQHLQNLARTKGILELNKVQLLYEQIGPEADPNLAPAAPQLQDLASSCPQEEVSQQQESVSTLPASVHPQLSPRQSLETQYLQHRLQKPSLLSKAQNTCQLYCKEPPRSLEQQLQEHRLQQKRLFLQKQSQLQAYFNQMQIAESSYPQPSQQLPLPRQETPPPSQQAPPFSLTQPLSPVLEPSSEQMQYSPFLSQYQEMQLQPLPSTSGPRAAPPLPTQLQQQQPPPPPPPPPPRQPGAAPAPLQFSYQTCELPSAASPAPDYPTPCQYPVDGAQQSDLTGPDCPRSPGLQEAPSSYDPLALSELPGLFDCEMLDAVDPQHNGYVLVN

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




AK3_A_2(3D2I)
AURKA_MOUSE
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




AK6_A_2(3DJ6)
AURKA_MOUSE
[Raw transfer]




AK2_A_2(3D15)
AURKA_MOUSE
[Raw transfer]




AK1_A_2(3D14)
AURKA_MOUSE
[Raw transfer]




AK8_B_5(3EFW)
AURKA_HUMAN
[Raw transfer]




AK7_A_2(3DJ7)
AURKA_MOUSE
[Raw transfer]




AK8_A_3(3EFW)
AURKA_HUMAN
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




OT5_A_2(4CQG)
MELK_MOUSE
[Raw transfer]




ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




AK5_A_2(3DJ5)
AURKA_MOUSE
[Raw transfer]




B49_A_5(2Y7J)
PHKG2_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




CPS_B_10(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_B_12(4CZT)
CIPKN_ARATH
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]




14 PsiBlast_PDB 80.0849%-112 - C2 -3AQV 7.7 AAPK2_HUMAN
27 PsiBlast_CBE 74.8941%-104 - C2 -4CZU - CIPKN_ARATH
24 PsiBlast_CBE 73.3142%-104 - C2 -4CZT - CIPKN_ARATH
19 PsiBlast_PDB 71.6342%-104 - C2 -4CZT 4.1 CIPKN_ARATH
26 PsiBlast_CBE 71.4842%-106 - C2 -4CZT 5.7 CIPKN_ARATH
29 PsiBlast_CBE 71.2741%-104 - C2 -4CZU 5.1 CIPKN_ARATH
20 PsiBlast_PDB 71.0241%-106 - C2 -4CZU 5.2 CIPKN_ARATH
25 PsiBlast_CBE 70.8042%-111 - C2 -4CZT - CIPKN_ARATH
59 PsiBlast_CBE 70.4640%-106 - C2 -3MA6 4.6 ?
64 PsiBlast_CBE 69.8339%-103 - C2 -2WEI 7.1 ?
109 PsiBlast_CBE 69.4435%-111 - C2 -4FG8 4.2 KCC1A_HUMAN
28 PsiBlast_CBE 69.1641%-113 - C2 -4CZU - CIPKN_ARATH
100 PsiBlast_CBE 69.0837%-114 - C2 -4FG7 4.5 KCC1A_HUMAN
30 PsiBlast_CBE 68.7840%-109 - C2 -4CQG 8.7 MELK_MOUSE
98 PsiBlast_CBE 68.6136%-107 - C2 -3D14 8.2 AURKA_MOUSE
93 PsiBlast_CBE 68.0236%-109 - C2 -3DJ7 8.2 AURKA_MOUSE
104 PsiBlast_CBE 67.9937%-109 - C2 -2Y7J 6.7 PHKG2_HUMAN
96 PsiBlast_CBE 67.7936%-113 - C2 -3D2I 8.0 AURKA_MOUSE
106 PsiBlast_CBE 67.6434%-121 - C2 -3EFW 7.6 AURKA_HUMAN
58 PsiBlast_CBE 67.5640%-106 - C2 -3MA6 6.0 ?
110 PsiBlast_CBE 67.0935%-116 - C2 -4FG8 5.7 KCC1A_HUMAN
105 PsiBlast_CBE 66.8234%-119 * C2 *3EFW 7.8 AURKA_HUMAN
107 PsiBlast_CBE 66.6835%-113 - C2 -4FG9 5.7 KCC1A_HUMAN
103 PsiBlast_CBE 66.6837%-109 - C2 -2Y7J 6.1 PHKG2_HUMAN
108 PsiBlast_CBE 66.5835%-117 - C2 -4FG9 5.9 KCC1A_HUMAN
102 PsiBlast_CBE 65.8537%-110 - C2 -2Y7J 6.3 PHKG2_HUMAN
97 PsiBlast_CBE 65.5236%-108 - C2 -3D15 8.1 AURKA_MOUSE
94 PsiBlast_CBE 64.8536%-115 - C2 -3DJ6 9.6 AURKA_MOUSE
95 PsiBlast_CBE 63.3836%-115 - C2 -3DJ5 9.0 AURKA_MOUSE
99 PsiBlast_CBE 60.7437%-112 - C2 -2W4O 4.4 KCC4_HUMAN