@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : STK11_HUMAN: (2015-10-19 )
MEVVDPQQLGMFTEGELMSVGMDTFIHRIDSTEVIYQPRRKRAKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISDLGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWRSMTVVPYLEDLHGADEDEDLFDIEDDIIYTQDFTVPGQVPEEEASHNGQRRGLPKAVCMNGTEAAQLSTKSRAEGRAPNPARKACSASSKIRRLSACKQQ

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_4(2YEX)
CHK1_HUMAN
[Raw transfer]




ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




1D1_A_2(4I5P)
PLK2_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




609_A_2(2ZV2)
KKCC2_HUMAN
[Raw transfer]




609_A_2(2ZV2)
KKCC2_HUMAN
[Raw transfer]




S25_A_3(3TKI)
CHK1_HUMAN
[Raw transfer]




YJA_A_5(4C2V)
AUKBA_XENLA
[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




OT5_A_2(4CQG)
MELK_MOUSE
[Raw transfer]




1C7_A_2(4I6F)
PLK2_HUMAN
[Raw transfer]




1C8_A_2(4I6H)
PLK2_HUMAN
[Raw transfer]




11G_A_2(4I6B)
PLK2_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




CPS_B_12(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_B_10(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_C_16(4CZU)
CIPKN_ARATH
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




101 HHSearch 61.1937% -93 - C1 -2ZV2 6.6 KKCC2_HUMAN
33 PsiBlast_CBE 58.8134% -94 - C1 -2ZV2 6.6 KKCC2_HUMAN
16 PsiBlast_PDB 56.7735% -86 - C1 -3AQV 7.5 AAPK2_HUMAN
102 HHSearch 56.1333% -85 - C1 -3HKO 5.3 ?
22 PsiBlast_CBE 54.2733% -81 - C1 -4CZT - CIPKN_ARATH
12 PsiBlast_PDB 53.8933% -80 - C1 -4CZU 5.3 CIPKN_ARATH
27 PsiBlast_CBE 53.5633% -79 - C1 -4CZU 5.1 CIPKN_ARATH
106 HHSearch 53.5332% -80 - C1 -1XJD 8.5
24 PsiBlast_CBE 52.7633% -76 - C1 -4CZT 4.9 CIPKN_ARATH
32 PsiBlast_CBE 52.4933% -85 - C1 -4CQG 8.5 MELK_MOUSE
8 PsiBlast_PDB 51.2833% -77 - C1 -4CZT 4.0 CIPKN_ARATH
81 PsiBlast_CBE 51.2532% -98 - C1 -4FG7 4.3 KCC1A_HUMAN
23 PsiBlast_CBE 51.1833% -82 - C1 -4CZT - CIPKN_ARATH
26 PsiBlast_CBE 50.8133% -83 - C1 -4CZU 4.5 CIPKN_ARATH
38 PsiBlast_CBE 48.3931% -77 - C1 -4I6F 6.5 PLK2_HUMAN
39 PsiBlast_CBE 48.2431% -75 - C1 -4I6B 4.1 PLK2_HUMAN
40 PsiBlast_CBE 47.4931% -75 - C1 -4I5P 4.6 PLK2_HUMAN
75 PsiBlast_CBE 46.4532% -83 - C1 -3MA6 5.5 ?
37 PsiBlast_CBE 46.1331% -75 - C1 -4I6H 4.5 PLK2_HUMAN
76 PsiBlast_CBE 45.8732% -87 - C1 -3MA6 4.1 ?
111 HHSearch 43.7230% -83 - C1 -3TKI 7.4 CHK1_HUMAN
97 HHSearch 42.1830% -75 - C1 -2YEX 6.2 CHK1_HUMAN