@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : STK33_HUMAN: (2015-10-20 )
MADSGLDKKSTKCPDCSSASQKDVLCVCSSKTRVPPVLVVEMSQTSSIGSAESLISLERKKEKNINRDITSRKDLPSRTSNVERKASQQQWGRGNFTEGKVPHIRIENGAAIEEIYTFGRILGKGSFGIVIEATDKETETKWAIKKVNKEKAGSSAVKLLEREVNILKSVKHEHIIHLEQVFETPKKMYLVMELCEDGELKEILDRKGHFSENETRWIIQSLASAIAYLHNNDIVHRDLKLENIMVKSSLIDDNNEINLNIKVTDFGLAVKKQSRSEAMLQATCGTPIYMAPEVISAHDYSQQCDIWSIGVVMYMLLRGEPPFLASSEEKLFELIRKGELHFENAVWNSISDCAKSVLKQLMKVDPAHRITAKELLDNQWLTGNKLSSVRPTNVLEMMKEWKNNPESVEENTTEEKNKPSTEEKLKSYQPWGNVPDANYTSDEEEEKQSTAYEKQFPATSKDNFDMCSSSFTSSKLLPAEIKGEMEKTPVTPSQGTATKYPAKSGALSRTKKKL

Atome Classification :

(7 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




4 PsiBlast_PDB 73.3038%-108 - C1 -4FG7 4.2 KCC1A_HUMAN
22 PsiBlast_CBE 71.7138%-116 - C1 -4FG8 4.4 KCC1A_HUMAN
3 PsiBlast_PDB 69.9038%-118 - C1 -4FG8 5.3 KCC1A_HUMAN
23 PsiBlast_CBE 63.1837% -85 - C1 -2JAM 6.3 KCC1G_HUMAN
13 PsiBlast_PDB 62.2136% -99 - C1 -2WEI 6.9 ?
48 PsiBlast_CBE 62.0337% -99 - C1 -3MA6 4.5 ?
47 PsiBlast_CBE 61.6437%-102 - C1 -3MA6 5.7 ?