@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : TGFR2_HUMAN: (2015-10-20 )
MGRGLLRGLWPLHIVLWTRIASTIPPHVQKSVNNDMIVTDNNGAVKFPQLCKFCDVRFSTCDNQKSCMSNCSITSICEKPQEVCVAVWRKNDENITLETVCHDPKLPYHDFILEDAASPKCIMKEKKKPGETFFMCSCSSDECNDNIIFSEEYNTSNPDLLLVIFQVTGISLLPPLGVAISVIIIFYCYRVNRQQKLSSTWETGKTRKLMEFSEHCAIILEDDRSDISSTCANNINHNTELLPIELDTLVGKGRFAEVYKAKLKQNTSEQFETVAVKIFPYEEYASWKTEKDIFSDINLKHENILQFLTAEERKTELGKQYWLITAFHAKGNLQEYLTRHVISWEDLRKLGSSLARGIAHLHSDHTPCGRPKMPIVHRDLKSSNILVKNDLTCCLCDFGLSLRLDPTLSVDDLANSGQVGTARYMAPEVLESRMNLENVESFKQTDVYSMALVLWEMTSRCNAVGEVKDYEPPFGSKVREHPCVESMKDNVLRDRGRPEIPSFWLNHQGIQMVCETLTECWDHDPEARLTAQCVAERFSELEHLDRLSGRSCSEEKIPEDGSLNTTK

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

QIG_A_2(3GXL)
TGFR1_HUMAN
[Raw transfer]




ZZG_A_2(2WOT)
TGFR1_HUMAN
[Raw transfer]




GVD_B_10(3SOC)
AVR2A_HUMAN
[Raw transfer]




LDN_C_20(3Q4U)
ACVR1_HUMAN
[Raw transfer]




855_A_2(3HMM)
TGFR1_HUMAN
[Raw transfer]




GVD_A_3(3SOC)
AVR2A_HUMAN
[Raw transfer]




LDN_B_13(3Q4U)
ACVR1_HUMAN
[Raw transfer]




GOL_A_6(4DYM)
ACVR1_HUMAN
[Raw transfer]




844_B_10(4BGG)
ACVR1_HUMAN
[Raw transfer]




GVD_A_3(3SOC)
AVR2A_HUMAN
[Raw transfer]




844_C_14(4BGG)
ACVR1_HUMAN
[Raw transfer]




LDN_C_6(3MDY)
BMR1B_HUMAN
[Raw transfer]




PY1_C_3(1PY5)
TGFR1_HUMAN
[Raw transfer]




IYZ_A_4(4DYM)
ACVR1_HUMAN
[Raw transfer]




844_D_16(4BGG)
ACVR1_HUMAN
[Raw transfer]




085_A_2(3TZM)
TGFR1_HUMAN
[Raw transfer]




844_A_5(4BGG)
ACVR1_HUMAN
[Raw transfer]




LDN_A_5(3Q4U)
ACVR1_HUMAN
[Raw transfer]




LDN_A_5(3Q4U)
ACVR1_HUMAN
[Raw transfer]




TAK_A_3(3Q4T)
AVR2A_HUMAN
[Raw transfer]




507_A_4(3OOM)
ACVR1_HUMAN
[Raw transfer]




LDN_A_5(3MDY)
BMR1B_HUMAN
[Raw transfer]




LDN_A_5(3MDY)
BMR1B_HUMAN
[Raw transfer]




3WN_A_2(4X2J)
TGFR1_HUMAN
[Raw transfer]




GOL_A_8(4DYM)
ACVR1_HUMAN
[Raw transfer]




3WO_A_2(4X2K)
TGFR1_HUMAN
[Raw transfer]




TAK_A_10(4C02)
ACVR1_HUMAN
[Raw transfer]




ZZF_A_3(2WOU)
TGFR1_HUMAN
[Raw transfer]




580_B_2(1RW8)
TGFR1_HUMAN
[Raw transfer]




A3F_A_17(3MTF)
ACVR1_HUMAN
[Raw transfer]




TAK_A_3(3H9R)
ACVR1_HUMAN
[Raw transfer]




6OJ_B_8(4ASX)
AVR2A_HUMAN
[Raw transfer]




6OJ_A_3(4ASX)
AVR2A_HUMAN
[Raw transfer]




TAK_B_17(3Q4T)
AVR2A_HUMAN
[Raw transfer]




3WA_A_2(4X0M)
TGFR1_HUMAN
[Raw transfer]




3WK_A_2(4X2G)
?
[Raw transfer]




ADE_A_4(2QLU)
AVR2B_HUMAN
[Raw transfer]




TRS_A_4(4X2G)
?
[Raw transfer]




EDO_A_10(3Q4U)
ACVR1_HUMAN
[Raw transfer]




102 HHSearch 92.7547% -77 - C1 -3SOC 7.1 AVR2A_HUMAN
1 PsiBlast_PDB 92.5245% -80 - C1 -3Q4T 5.2 AVR2A_HUMAN
23 PsiBlast_CBE 92.1045% -80 - C1 -3Q4T 5.1 AVR2A_HUMAN
3 PsiBlast_PDB 92.0645% -81 - C1 -4ASX 5.8 AVR2A_HUMAN
21 PsiBlast_CBE 91.8245% -80 - C1 -4ASX 5.6 AVR2A_HUMAN
22 PsiBlast_CBE 91.3545% -79 - C1 -3SOC 5.6 AVR2A_HUMAN
2 PsiBlast_PDB 91.3245% -76 - C1 -3SOC 7.1 AVR2A_HUMAN
4 PsiBlast_PDB 87.6945% -80 - C1 -2QLU 3.1 AVR2B_HUMAN
16 PsiBlast_PDB 84.9241% -78 - C1 -2WOU 6.1 TGFR1_HUMAN
12 PsiBlast_PDB 84.9241% -79 - C1 -1RW8 7.7 TGFR1_HUMAN
11 PsiBlast_PDB 84.2641% -77 - C1 -3TZM 7.9 TGFR1_HUMAN
13 PsiBlast_PDB 84.1941% -76 - C1 -1PY5 6.3 TGFR1_HUMAN
15 PsiBlast_PDB 83.9941% -74 - C1 -2WOT 8.9 TGFR1_HUMAN
43 PsiBlast_CBE 83.7941% -76 - C1 -4X0M 3.3 TGFR1_HUMAN
42 PsiBlast_CBE 83.6241% -77 - C1 -4X2J 5.5 TGFR1_HUMAN
41 PsiBlast_CBE 83.6241% -77 - C1 -4X2K 5.5 TGFR1_HUMAN
46 PsiBlast_CBE 82.9637% -82 - C1 -3H9R 8.0 ACVR1_HUMAN
14 PsiBlast_PDB 82.8041% -76 - C1 -4X2G 4.1 ?
18 PsiBlast_PDB 82.7841% -80 - C1 -3HMM 8.4 TGFR1_HUMAN
17 PsiBlast_PDB 82.6441% -75 - C1 -3GXL 8.3 TGFR1_HUMAN
45 PsiBlast_CBE 81.8237% -78 - C1 -4C02 7.1 ACVR1_HUMAN
47 PsiBlast_CBE 81.0537% -76 - C1 -4BGG 8.4 ACVR1_HUMAN
58 PsiBlast_CBE 80.1737% -73 - C1 -4DYM 5.3 ACVR1_HUMAN
48 PsiBlast_CBE 79.9437% -74 - C1 -4BGG 8.3 ACVR1_HUMAN
57 PsiBlast_CBE 79.7837% -72 - C1 -3MTF 7.5 ACVR1_HUMAN
99 HHSearch 79.5138% -73 - C1 -3Q4U 9.2 ACVR1_HUMAN
53 PsiBlast_CBE 79.2537% -75 - C1 -3Q4U 8.6 ACVR1_HUMAN
49 PsiBlast_CBE 79.0537% -72 - C1 -4BGG 7.8 ACVR1_HUMAN
50 PsiBlast_CBE 77.9337% -70 - C1 -4BGG 8.2 ACVR1_HUMAN
54 PsiBlast_CBE 77.7137% -68 - C1 -3Q4U 9.2 ACVR1_HUMAN
52 PsiBlast_CBE 77.5237% -65 - C1 -3Q4U 9.7 ACVR1_HUMAN
55 PsiBlast_CBE 77.4137% -70 - C1 -3OOM 7.3 ACVR1_HUMAN
59 PsiBlast_CBE 76.7036% -74 - C1 -3MDY 6.5 BMR1B_HUMAN
103 HHSearch 76.6537% -72 - C1 -3MDY 6.5 BMR1B_HUMAN
60 PsiBlast_CBE 75.9336% -74 - C1 -3MDY 6.5 BMR1B_HUMAN