@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : VGFR2_HUMAN: (2015-10-22 )
MQSKVLLAVALWLCVETRAASVGLPSVSLDLPRLSIQKDILTIKANTTLQITCRGQRDLDWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTNLEIIILVGTAVIAMFFWLLLVIILRTVKRANGGELKTGYLSIVMDPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQDGKDYIVLPISETLSMEEDSGLSLPTSPVSCMEEEEVCDPKFHYDNTAGISQYLQNSKRKSRPVSVKTFEDIPLEEPEVKVIPDDNQTDSGMVLASEELKTLEDRTKLSPSFGGMVPSKSRESVASEGSNQTSGYQSGYHSDDTDTTVYSSEEAELLKLIEIGVQTGSTAQILQPDSGTTLSSPPV

Atome Classification :

(89 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BAX_A_2(3WZE)

[Raw transfer]



GIG_A_4(2OH4)

[Raw transfer]



K11_A_2(3EWH)

[Raw transfer]



BAX_A_2(4ASD)

[Raw transfer]



42Q_A_2(3VHE)

[Raw transfer]



276_A_2(2QU5)

[Raw transfer]



0KF_A_2(3VO3)

[Raw transfer]



LEV_A_2(3WZD)

[Raw transfer]



0JA_A_2(3VNT)

[Raw transfer]



608_C_3(2P2I)
VGFR2_HUMAN
[Raw transfer]



887_B_5(3B8R)

[Raw transfer]



706_B_4(3EFL)

[Raw transfer]



C92_B_4(3CPB)

[Raw transfer]



608_D_4(2P2I)

[Raw transfer]



8ST_A_2(3HNG)

[Raw transfer]



857_B_5(2QU6)

[Raw transfer]



706_A_3(3EFL)
VGFR2_HUMAN
[Raw transfer]



03X_A_2(3U6J)

[Raw transfer]



AAX_B_2(1Y6B)

[Raw transfer]



C19_B_4(3CP9)

[Raw transfer]



900_B_4(3B8Q)

[Raw transfer]



C92_A_3(3CPB)
VGFR2_HUMAN
[Raw transfer]



AXI_A_2(4AG8)

[Raw transfer]



0LI_A_2(4U0I)

[Raw transfer]



RAJ_A_2(3BE2)

[Raw transfer]



GOL_A_11(3WZD)

[Raw transfer]



2RL_A_2(2RL5)

[Raw transfer]



994_B_2(2P2H)

[Raw transfer]



00J_A_2(2XIR)

[Raw transfer]



887_A_4(3B8R)
VGFR2_HUMAN
[Raw transfer]



C52_B_4(3CPC)

[Raw transfer]



C19_A_3(3CP9)
VGFR2_HUMAN
[Raw transfer]



STI_A_2(4R7I)
?
[Raw transfer]



647_A_2(4HVS)

[Raw transfer]



C52_A_3(3CPC)
VGFR2_HUMAN
[Raw transfer]



900_A_3(3B8Q)
VGFR2_HUMAN
[Raw transfer]



STI_A_4(1T46)
?
[Raw transfer]



64M_A_2(4HW7)

[Raw transfer]



LIF_B_2(1YWN)

[Raw transfer]



KIM_A_4(3CJG)

[Raw transfer]



ACP_B_12(2PY3)

[Raw transfer]



ACP_A_6(4J99)
FGFR2_HUMAN
[Raw transfer]



ACP_A_7(2PY3)
FGFR2_HUMAN
[Raw transfer]



ACP_B_8(4J98)
FGFR2_HUMAN
[Raw transfer]



AAZ_A_2(1Y6A)

[Raw transfer]



A96_A_3(3DTW)
VGFR2_HUMAN
[Raw transfer]



ACP_D_16(4J99)
?
[Raw transfer]



ACP_B_9(4J99)

[Raw transfer]



P30_A_2(4RT7)

[Raw transfer]



ACP_C_12(4J99)
?
[Raw transfer]



ACP_B_12(2PZP)

[Raw transfer]



BPK_A_2(3VHK)

[Raw transfer]



PD1_D_4(2FGI)
FGFR1_HUMAN
[Raw transfer]



XIN_A_7(3C7Q)

[Raw transfer]



3RH_A_3(3RI1)
?
[Raw transfer]



ACP_A_7(2PZP)
FGFR2_HUMAN
[Raw transfer]



ACP_D_12(4J95)
?
[Raw transfer]



3RH_B_9(3RI1)
FGFR2_HUMAN
[Raw transfer]



ACP_B_7(4J95)
?
[Raw transfer]



P30_A_3(4XUF)
FLT3_HUMAN
[Raw transfer]



ACP_A_7(2PZ5)
FGFR2_HUMAN
[Raw transfer]



ACP_A_5(4J95)
FGFR2_HUMAN
[Raw transfer]



LWJ_B_5(3WJ6)

[Raw transfer]



ACP_B_12(2PZ5)

[Raw transfer]



PD1_C_3(2FGI)

[Raw transfer]



ABG_B_8(2PWL)
FGFR2_HUMAN
[Raw transfer]



SU1_B_3(1FGI)

[Raw transfer]



M33_A_7(3B2T)
FGFR2_HUMAN
[Raw transfer]



ACP_B_7(4J96)
FGFR2_HUMAN
[Raw transfer]



ABG_A_7(2PWL)
FGFR2_HUMAN
[Raw transfer]



SU1_A_4(1FGI)
FGFR1_HUMAN
[Raw transfer]



P30_B_4(4XUF)

[Raw transfer]



ACP_B_8(4J97)

[Raw transfer]



LWJ_A_3(3WJ6)
FGFR1_HUMAN
[Raw transfer]



38O_B_7(5AM6)

[Raw transfer]



ACP_C_10(4J95)
?
[Raw transfer]



ACP_C_10(4J97)
?
[Raw transfer]



SU2_B_3(1AGW)

[Raw transfer]



ACP_D_12(4J97)
?
[Raw transfer]



38O_A_4(5AM6)
FGFR1_HUMAN
[Raw transfer]



ACP_A_5(4J97)
FGFR2_HUMAN
[Raw transfer]



B49_A_2(3G0E)
KIT_HUMAN
[Raw transfer]



M33_B_8(3B2T)

[Raw transfer]



B49_B_5(3G0F)
?
[Raw transfer]



B49_A_3(3G0F)
?
[Raw transfer]



EDO_A_3(3VHK)

[Raw transfer]



ABG_A_7(2Q0B)
FGFR2_HUMAN
[Raw transfer]



ABG_A_7(2PZR)
FGFR2_HUMAN
[Raw transfer]



ABG_D_12(2PVY)
?
[Raw transfer]



EDO_A_3(3VNT)

[Raw transfer]



ABG_B_8(2Q0B)

[Raw transfer]



DTT_A_3(3WZD)

[Raw transfer]



ABG_B_8(2PZR)

[Raw transfer]
5 PsiBlast_PDB 93.64100%-124 - C3 -1Y6B 8.5
6 PsiBlast_PDB 93.25100%-110 - C3 -3VHE 10.6
3 PsiBlast_PDB 92.9399%-105 - C3 -3VHK 7.0
4 PsiBlast_PDB 92.04100%-125 - C3 -1Y6A 6.7
44 PsiBlast_CBE 87.9173%-105 - C3 -3HNG 8.7
22 PsiBlast_CBE 87.4785%-112 - C3 -3EWH 11.1
34 PsiBlast_CBE 86.3484%-114 - C3 -3BE2 11.4
19 PsiBlast_PDB 86.3285%-111 - C3 -3WZE 10.3
42 PsiBlast_CBE 86.2284%-118 - C3 -2P2H 7.2
21 PsiBlast_CBE 86.0985%-109 - C3 -3U6J 11.9
18 PsiBlast_PDB 85.9985%-122 - C3 -3WZD 8.9
36 PsiBlast_CBE 85.8984%-122 - C3 -3B8R 9.8 VGFR2_HUMAN
9 PsiBlast_PDB 85.7086%-108 - C3 -4ASD 9.7
26 PsiBlast_CBE 85.6884%-117 - C3 -2P2I 9.6 VGFR2_HUMAN
33 PsiBlast_CBE 85.6784%-118 - C3 -3CP9 9.1 VGFR2_HUMAN
31 PsiBlast_CBE 85.6684%-123 - C3 -3CPB 7.6 VGFR2_HUMAN
13 PsiBlast_PDB 85.6286%-113 - C3 -2XIR 9.7
39 PsiBlast_CBE 85.6184%-113 - C3 -2RL5 10.2
29 PsiBlast_CBE 85.3184%-121 - C3 -3CPC 9.5 VGFR2_HUMAN
11 PsiBlast_PDB 85.2986%-108 - C3 -3VNT 10.3
27 PsiBlast_CBE 85.2784%-113 - C3 -3DTW 8.5 VGFR2_HUMAN
41 PsiBlast_CBE 85.2184%-116 - C3 -2QU5 10.3
38 PsiBlast_CBE 85.2084%-117 - C3 -3B8Q 10.3 VGFR2_HUMAN
24 PsiBlast_CBE 85.1784%-112 - C3 -3EFL 8.8 VGFR2_HUMAN
12 PsiBlast_PDB 84.9886%-111 - C3 -3VO3 9.5
25 PsiBlast_CBE 84.9784%-128 - C3 -2P2I 9.0
14 PsiBlast_PDB 84.9586%-110 - C3 -4AG8 9.5
35 PsiBlast_CBE 84.7184%-124 - C3 -3B8R 9.7
40 PsiBlast_CBE 84.0784%-126 - C3 -2QU6 10.0
43 PsiBlast_CBE 83.7383%-117 - C3 -3CJG 6.7
37 PsiBlast_CBE 83.7284%-119 - C3 -3B8Q 10.7
17 PsiBlast_PDB 83.7185%-111 - C3 -2OH4 10.7
32 PsiBlast_CBE 83.3084%-121 - C3 -3CP9 9.0
28 PsiBlast_CBE 82.8284%-123 - C3 -3CPC 9.6
16 PsiBlast_PDB 82.6285%-114 - C3 -1YWN 9.7
23 PsiBlast_CBE 82.4584%-124 - C3 -3EFL 8.4
20 PsiBlast_PDB 81.9884%-112 - C3 -3C7Q 7.7
30 PsiBlast_CBE 81.5284%-122 - C3 -3CPB 8.1
51 PsiBlast_CBE 77.1548%-111 - C3 -4RT7 10.4
89 PsiBlast_CBE 73.7148% -98 - C3 -3RI1 6.8 ?
50 PsiBlast_CBE 73.5950%-101 - C3 -4HVS 9.5
78 PsiBlast_CBE 72.7149%-100 - C3 -4J99 5.1
65 PsiBlast_CBE 72.6950%-108 - C3 -4J95 5.1 ?
99 PsiBlast_CBE 72.6148% -89 - C3 -5AM6 6.3 FGFR1_HUMAN
97 PsiBlast_CBE 72.5848% -98 - C3 -2PY3 5.6 FGFR2_HUMAN
106 PsiBlast_CBE 72.4648% -91 - C3 -1FGI 7.0 FGFR1_HUMAN
95 PsiBlast_CBE 72.4348% -99 - C3 -3B2T 4.6 FGFR2_HUMAN
77 PsiBlast_CBE 72.3749% -98 - C3 -4J99 5.6 ?
52 PsiBlast_CBE 72.2349%-101 - C3 -4XUF 8.8
79 PsiBlast_CBE 72.2149%-103 - C3 -4J99 4.8 FGFR2_HUMAN
60 PsiBlast_CBE 72.2146%-101 - C3 -4HW7 9.3
76 PsiBlast_CBE 72.1849%-103 - C3 -4J99 5.9 ?
68 PsiBlast_CBE 72.1750%-104 - C3 -4J95 4.7 FGFR2_HUMAN
94 PsiBlast_CBE 71.9248% -99 - C3 -3B2T 4.3
98 PsiBlast_CBE 71.8648% -96 - C3 -5AM6 6.5
92 PsiBlast_CBE 71.8548% -93 - C3 -2PWL 5.0 FGFR2_HUMAN
88 PsiBlast_CBE 71.8448% -95 - C3 -3RI1 6.5 FGFR2_HUMAN
62 PsiBlast_CBE 71.8149%-100 - C3 -2PZP 4.9 FGFR2_HUMAN
61 PsiBlast_CBE 71.7349% -96 - C3 -2PZP 5.2
53 PsiBlast_CBE 71.7249%-101 - C3 -4XUF 7.4 FLT3_HUMAN
87 PsiBlast_CBE 71.5948% -97 - C3 -2PZ5 5.3 FGFR2_HUMAN
54 PsiBlast_CBE 71.5747% -87 - C3 -1T46 10.9 ?
86 PsiBlast_CBE 71.5048% -97 - C3 -2PZ5 5.4
66 PsiBlast_CBE 71.4950%-104 - C3 -4J95 4.5 ?
59 PsiBlast_CBE 71.4546%-100 - C3 -4R7I 10.2 ?
67 PsiBlast_CBE 71.3350%-105 - C3 -4J95 4.7 ?
74 PsiBlast_CBE 71.2949% -96 - C3 -4J96 4.6 FGFR2_HUMAN
105 PsiBlast_CBE 71.2648% -97 - C3 -1FGI 7.0
90 PsiBlast_CBE 71.2049% -96 - C3 -2Q0B 3.0
63 PsiBlast_CBE 71.1150% -99 - C3 -4J98 5.4 FGFR2_HUMAN
91 PsiBlast_CBE 71.0449%-101 - C3 -2Q0B 3.2 FGFR2_HUMAN
72 PsiBlast_CBE 71.0249% -95 - C3 -4J97 4.8
81 PsiBlast_CBE 70.9449%-101 - C3 -2PZR 3.1 FGFR2_HUMAN
73 PsiBlast_CBE 70.8949% -99 - C3 -4J97 4.5 FGFR2_HUMAN
69 PsiBlast_CBE 70.7550%-105 - C3 -2PVY 4.3 ?
101 PsiBlast_CBE 70.7248% -92 - C3 -3WJ6 8.3
80 PsiBlast_CBE 70.5949% -99 - C3 -2PZR 3.0
96 PsiBlast_CBE 70.5748% -94 - C3 -2PY3 6.1
55 PsiBlast_CBE 70.4947% -86 - C3 -4U0I 11.1
104 PsiBlast_CBE 70.1548% -96 - C3 -2FGI 8.2 FGFR1_HUMAN
71 PsiBlast_CBE 70.1049% -99 - C3 -4J97 4.7 ?
70 PsiBlast_CBE 69.8549%-100 - C3 -4J97 4.7 ?
93 PsiBlast_CBE 69.4848% -91 - C3 -2PWL 4.9 FGFR2_HUMAN
107 PsiBlast_CBE 69.4448% -97 * C3 *1AGW 6.0
102 PsiBlast_CBE 69.3748% -89 - C3 -3WJ6 8.4 FGFR1_HUMAN
103 PsiBlast_CBE 69.3148% -95 - C3 -2FGI 8.5
58 PsiBlast_CBE 69.0746% -88 - C3 -3G0F 6.8 ?
57 PsiBlast_CBE 67.9346% -87 - C3 -3G0F 7.1 ?
56 PsiBlast_CBE 67.9347% -85 - C3 -3G0E 7.3 KIT_HUMAN