@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : VGFR3_HUMAN: (2015-10-22 )
MQRGAALCLRLWLCLGLLDGLVSGYSMTPPTLNITEESHVIDTGDSLSISCRGQHPLEWAWPGAQEAPATGDKDSEDTGVVRDCEGTDARPYCKVLLLHEVHANDTGSYVCYYKYIKARIEGTTAASSYVFVRDFEQPFINKPDTLLVNRKDAMWVPCLVSIPGLNVTLRSQSSVLWPDGQEVVWDDRRGMLVSTPLLHDALYLQCETTWGDQDFLSNPFLVHITGNELYDIQLLPRKSLELLVGEKLVLNCTVWAEFNSGVTFDWDYPGKQAERGKWVPERRSQQTHTELSSILTIHNVSQHDLGSYVCKANNGIQRFRESTEVIVHENPFISVEWLKGPILEATAGDELVKLPVKLAAYPPPEFQWYKDGKALSGRHSPHALVLKEVTEASTGTYTLALWNSAAGLRRNISLELVVNVPPQIHEKEASSPSIYSRHSRQALTCTAYGVPLPLSIQWHWRPWTPCKMFAQRSLRRRQQQDLMPQCRDWRAVTTQDAVNPIESLDTWTEFVEGKNKTVSKLVIQNANVSAMYKCVVSNKVGQDERLIYFYVTTIPDGFTIESKPSEELLEGQPVLLSCQADSYKYEHLRWYRLNLSTLHDAHGNPLLLDCKNVHLFATPLAASLEEVAPGARHATLSLSIPRVAPEHEGHYVCEVQDRRSHDKHCHKKYLSVQALEAPRLTQNLTDLLVNVSDSLEMQCLVAGAHAPSIVWYKDERLLEEKSGVDLADSNQKLSIQRVREEDAGRYLCSVCNAKGCVNSSASVAVEGSEDKGSMEIVILVGTGVIAVFFWVLLLLIFCNMRRPAHADIKTGYLSIIMDPGEVPLEEQCEYLSYDASQWEFPRERLHLGRVLGYGAFGKVVEASAFGIHKGSSCDTVAVKMLKEGATASEHRALMSELKILIHIGNHLNVVNLLGACTKPQGPLMVIVEFCKYGNLSNFLRAKRDAFSPCAEKSPEQRGRFRAMVELARLDRRRPGSSDRVLFARFSKTEGGARRASPDQEAEDLWLSPLTMEDLVCYSFQVARGMEFLASRKCIHRDLAARNILLSESDVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLRDGTRMRAPELATPAIRRIMLNCWSGDPKARPAFSELVEILGDLLQGRGLQEEEEVCMAPRSSQSSEEGSFSQVSTMALHIAQADAEDSPPSLQRHSLAARYYNWVSFPGCLARGAETRGSSRMKTFEEFPMTPTTYKGSVDNQTDSGMVLASEEFEQIESRHRQESGFSCKGPGQNVAVTRAHPDSQGRRRRPERGARGGQVFYNSEYGELSEPSEEDHCSPSARVTFFTDNSY

Atome Classification :

(91 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C19_B_4(3CP9)

[Raw transfer]




K11_A_2(3EWH)

[Raw transfer]




608_D_4(2P2I)

[Raw transfer]




706_B_4(3EFL)

[Raw transfer]




GIG_A_4(2OH4)

[Raw transfer]




BAX_A_2(3WZE)

[Raw transfer]




276_A_2(2QU5)

[Raw transfer]




C92_B_4(3CPB)

[Raw transfer]




0LI_B_19(4V04)

[Raw transfer]




608_C_3(2P2I)
VGFR2_HUMAN
[Raw transfer]




42Q_A_2(3VHE)

[Raw transfer]




BAX_A_2(4ASD)

[Raw transfer]




0KF_A_2(3VO3)

[Raw transfer]




0LI_A_13(4V01)
FGFR1_HUMAN
[Raw transfer]




0LI_B_20(4V01)

[Raw transfer]




8ST_A_2(3HNG)

[Raw transfer]




706_A_3(3EFL)
VGFR2_HUMAN
[Raw transfer]




C92_A_3(3CPB)
VGFR2_HUMAN
[Raw transfer]




C19_A_3(3CP9)
VGFR2_HUMAN
[Raw transfer]




0LI_A_3(4UXQ)

[Raw transfer]




LEV_A_2(3WZD)

[Raw transfer]




0JA_A_2(3VNT)

[Raw transfer]




STI_A_2(4R7I)
?
[Raw transfer]




857_B_5(2QU6)

[Raw transfer]




887_B_5(3B8R)

[Raw transfer]




C52_B_4(3CPC)

[Raw transfer]




RAJ_A_2(3BE2)

[Raw transfer]




03X_A_2(3U6J)

[Raw transfer]




900_B_4(3B8Q)

[Raw transfer]




647_A_2(4HVS)

[Raw transfer]




GOL_A_11(3WZD)

[Raw transfer]




C52_A_3(3CPC)
VGFR2_HUMAN
[Raw transfer]




AAX_B_2(1Y6B)

[Raw transfer]




AXI_A_2(4AG8)

[Raw transfer]




887_A_4(3B8R)
VGFR2_HUMAN
[Raw transfer]




ACP_A_2(4K33)

[Raw transfer]




2RL_A_2(2RL5)

[Raw transfer]




64M_A_2(4HW7)

[Raw transfer]




LIF_B_2(1YWN)

[Raw transfer]




900_A_3(3B8Q)
VGFR2_HUMAN
[Raw transfer]




994_B_2(2P2H)

[Raw transfer]




ACP_D_16(4J99)
?
[Raw transfer]




ACP_A_7(2PY3)
FGFR2_HUMAN
[Raw transfer]




XOJ_A_11(5A4C)
?
[Raw transfer]




ACP_B_12(2PY3)

[Raw transfer]




00J_A_2(2XIR)

[Raw transfer]




ACP_B_8(4J98)
FGFR2_HUMAN
[Raw transfer]




ACP_B_9(4J99)

[Raw transfer]




ACP_C_12(4J99)
?
[Raw transfer]




ACP_A_6(4J99)
FGFR2_HUMAN
[Raw transfer]




P31_A_2(4R7H)
?
[Raw transfer]




A96_A_3(3DTW)
VGFR2_HUMAN
[Raw transfer]




XOJ_B_20(5A4C)
?
[Raw transfer]




ACP_D_12(4J95)
?
[Raw transfer]




3RH_B_9(3RI1)
FGFR2_HUMAN
[Raw transfer]




07J_B_7(3TT0)

[Raw transfer]




P30_A_2(4RT7)

[Raw transfer]




ACP_B_12(2PZP)

[Raw transfer]




KIM_A_4(3CJG)

[Raw transfer]




ACP_A_7(2PZP)
FGFR2_HUMAN
[Raw transfer]




66T_A_6(4V05)
FGFR1_HUMAN
[Raw transfer]




BPK_A_2(3VHK)

[Raw transfer]




3RH_A_3(3RI1)
?
[Raw transfer]




07J_A_3(3TT0)
FGFR1_HUMAN
[Raw transfer]




ACP_A_7(2PZ5)
FGFR2_HUMAN
[Raw transfer]




3RH_B_3(3RHX)

[Raw transfer]




4UT_B_4(4ZSA)

[Raw transfer]




AAZ_A_2(1Y6A)

[Raw transfer]




ACP_B_7(4J95)
?
[Raw transfer]




ACP_B_12(2PZ5)

[Raw transfer]




P30_A_3(4XUF)
FLT3_HUMAN
[Raw transfer]




3RH_A_6(3RHX)
FGFR1_HUMAN
[Raw transfer]




ACP_A_5(4J95)
FGFR2_HUMAN
[Raw transfer]




P30_B_4(4XUF)

[Raw transfer]




ACP_B_8(4J97)

[Raw transfer]




M33_A_7(3B2T)
FGFR2_HUMAN
[Raw transfer]




ACP_B_7(4J96)
FGFR2_HUMAN
[Raw transfer]




ABG_A_7(2PWL)
FGFR2_HUMAN
[Raw transfer]




ABG_B_8(2PWL)
FGFR2_HUMAN
[Raw transfer]




ACP_C_10(4J97)
?
[Raw transfer]




ACP_C_10(4J95)
?
[Raw transfer]




AA2_A_4(1OEC)

[Raw transfer]




5CN_B_2(2I1M)

[Raw transfer]




ACP_D_12(4J97)
?
[Raw transfer]




ACP_A_5(4J97)
FGFR2_HUMAN
[Raw transfer]




M33_B_8(3B2T)

[Raw transfer]




6C3_A_3(2I0V)

[Raw transfer]




ABG_D_12(2PVY)
?
[Raw transfer]




ABG_A_7(2PZR)
FGFR2_HUMAN
[Raw transfer]




ABG_A_7(2Q0B)
FGFR2_HUMAN
[Raw transfer]




EDO_A_3(3VHK)

[Raw transfer]




ABG_B_8(2Q0B)

[Raw transfer]




ABG_B_8(2PZR)

[Raw transfer]




DTT_A_3(3WZD)

[Raw transfer]




EDO_A_3(3VNT)

[Raw transfer]




6 PsiBlast_PDB 93.6768%-125 - C4 -1Y6B 8.5
7 PsiBlast_PDB 93.2168%-110 - C4 -3VHK 7.0
8 PsiBlast_PDB 92.4569%-115 - C4 -3VHE 10.6
5 PsiBlast_PDB 92.1668%-128 - C4 -1Y6A 6.7
9 PsiBlast_PDB 90.7966%-107 - C4 -3HNG 8.6
18 PsiBlast_PDB 88.5766%-124 - C4 -3WZD 8.9
40 PsiBlast_CBE 88.4865%-130 - C4 -2QU6 10.0
19 PsiBlast_PDB 87.9966%-111 - C4 -3WZE 10.3
29 PsiBlast_CBE 87.6665%-122 - C4 -3CPC 9.5 VGFR2_HUMAN
36 PsiBlast_CBE 87.6465%-121 - C4 -3B8R 9.8 VGFR2_HUMAN
3 PsiBlast_PDB 87.0165%-110 - C4 -4ASD 9.8
16 PsiBlast_PDB 86.7865%-117 - C4 -1YWN 9.7
31 PsiBlast_CBE 86.6865%-122 - C4 -3CPB 7.6 VGFR2_HUMAN
25 PsiBlast_CBE 86.6865%-127 - C4 -2P2I 9.0
12 PsiBlast_PDB 86.6466%-114 - C4 -2XIR 9.7
23 PsiBlast_CBE 86.4965%-123 - C4 -3EFL 8.4
20 PsiBlast_PDB 86.4566%-108 - C4 -3U6J 11.9
35 PsiBlast_CBE 86.2865%-123 - C4 -3B8R 9.7
11 PsiBlast_PDB 86.2766%-113 - C4 -3VO3 9.5
10 PsiBlast_PDB 86.2566%-111 - C4 -3VNT 10.2
26 PsiBlast_CBE 86.2265%-114 - C4 -2P2I 9.6 VGFR2_HUMAN
41 PsiBlast_CBE 86.1565%-116 - C4 -2QU5 10.3
33 PsiBlast_CBE 86.0265%-117 - C4 -3CP9 9.1 VGFR2_HUMAN
24 PsiBlast_CBE 85.9065%-112 - C4 -3EFL 8.8 VGFR2_HUMAN
21 PsiBlast_CBE 85.8765%-111 - C4 -3EWH 11.1
13 PsiBlast_PDB 85.7066%-110 - C4 -4AG8 9.5
42 PsiBlast_CBE 85.6865%-116 - C4 -2P2H 7.2
17 PsiBlast_PDB 85.5966%-122 - C4 -3CJG 6.8
34 PsiBlast_CBE 85.5365%-114 - C4 -3BE2 11.4
38 PsiBlast_CBE 85.3865%-116 - C4 -3B8Q 10.3 VGFR2_HUMAN
15 PsiBlast_PDB 85.3566%-111 - C4 -2OH4 10.7
32 PsiBlast_CBE 85.2765%-122 - C4 -3CP9 9.0
27 PsiBlast_CBE 84.9165%-113 - C4 -3DTW 8.5 VGFR2_HUMAN
37 PsiBlast_CBE 84.8465%-116 - C4 -3B8Q 10.7
39 PsiBlast_CBE 84.6665%-113 - C4 -2RL5 10.2
28 PsiBlast_CBE 84.6065%-125 - C4 -3CPC 9.6
30 PsiBlast_CBE 83.7065%-120 - C4 -3CPB 8.1
44 PsiBlast_CBE 83.2449%-112 - C4 -4RT7 10.6
49 PsiBlast_CBE 80.4547%-109 - C4 -4R7H 8.2 ?
92 PsiBlast_CBE 80.0044%-101 - C4 -4ZSA 8.2
47 PsiBlast_CBE 79.4949%-107 - C4 -4XUF 7.4 FLT3_HUMAN
48 PsiBlast_CBE 79.2847%-106 - C4 -4R7I 10.2 ?
46 PsiBlast_CBE 78.9149%-104 - C4 -4XUF 9.0
85 PsiBlast_CBE 78.9045%-106 - C4 -3RI1 6.8 ?
98 PsiBlast_CBE 78.5544%-106 - C4 -3RHX 7.1
51 PsiBlast_CBE 78.4247%-107 - C4 -2I0V 7.4
100 PsiBlast_CBE 78.4144%-100 - C4 -4V05 8.8 FGFR1_HUMAN
88 PsiBlast_CBE 78.3544%-108 - C4 -3B2T 4.3
50 PsiBlast_CBE 78.3447%-105 - C4 -4HW7 9.3
72 PsiBlast_CBE 78.3045%-108 - C4 -4J99 5.1
68 PsiBlast_CBE 78.2045%-105 - C4 -2PZR 3.0
87 PsiBlast_CBE 78.0645%-107 - C4 -2PY3 5.5 FGFR2_HUMAN
82 PsiBlast_CBE 78.0345%-105 - C4 -2PWL 5.0 FGFR2_HUMAN
99 PsiBlast_CBE 77.9244%-102 - C4 -3RHX 6.3 FGFR1_HUMAN
57 PsiBlast_CBE 77.7645%-114 - C4 -4J95 5.1 ?
89 PsiBlast_CBE 77.4844%-105 - C4 -3B2T 4.6 FGFR2_HUMAN
81 PsiBlast_CBE 77.4845%-106 - C4 -2PZ5 5.3 FGFR2_HUMAN
79 PsiBlast_CBE 77.4145%-107 - C4 -2Q0B 3.2 FGFR2_HUMAN
73 PsiBlast_CBE 77.4045%-113 - C4 -4J99 4.8 FGFR2_HUMAN
84 PsiBlast_CBE 77.3945%-105 - C4 -3RI1 6.5 FGFR2_HUMAN
71 PsiBlast_CBE 77.3945%-107 - C4 -4J99 5.6 ?
61 PsiBlast_CBE 77.3545%-111 - C4 -2PVY 4.3 ?
96 PsiBlast_CBE 77.3344%-106 - C4 -3TT0 8.1
69 PsiBlast_CBE 77.3145%-107 - C4 -2PZR 3.1 FGFR2_HUMAN
101 PsiBlast_CBE 77.1044%-100 - C4 -4V04 11.3
53 PsiBlast_CBE 77.0845%-105 - C4 -2PZP 5.1
104 PsiBlast_CBE 77.0644%-102 * C4 *4V01 11.9 FGFR1_HUMAN
80 PsiBlast_CBE 77.0345%-105 - C4 -2PZ5 5.2
60 PsiBlast_CBE 77.0245%-111 - C4 -4J95 4.7 FGFR2_HUMAN
70 PsiBlast_CBE 76.8845%-112 - C4 -4J99 5.8 ?
54 PsiBlast_CBE 76.7745%-107 - C4 -2PZP 4.9 FGFR2_HUMAN
83 PsiBlast_CBE 76.5945%-101 - C4 -2PWL 4.9 FGFR2_HUMAN
52 PsiBlast_CBE 76.5147%-105 - C4 -2I1M 7.2
95 PsiBlast_CBE 76.5044% -96 - C4 -5A4C 8.0 ?
91 PsiBlast_CBE 76.4246%-102 - C4 -4UXQ 11.8
86 PsiBlast_CBE 76.4145%-102 - C4 -2PY3 6.1
45 PsiBlast_CBE 76.4149% -99 - C4 -4HVS 9.5
78 PsiBlast_CBE 76.2845%-103 - C4 -2Q0B 3.0
90 PsiBlast_CBE 76.2346%-108 - C4 -4K33 8.1
59 PsiBlast_CBE 75.6745%-111 - C4 -4J95 4.7 ?
55 PsiBlast_CBE 75.4545%-105 - C4 -4J98 5.4 FGFR2_HUMAN
64 PsiBlast_CBE 75.4045%-110 - C4 -4J97 4.7 ?
67 PsiBlast_CBE 75.1445%-108 - C4 -4J97 4.5 FGFR2_HUMAN
74 PsiBlast_CBE 75.0145%-104 - C4 -4J96 4.6 FGFR2_HUMAN
58 PsiBlast_CBE 74.9645%-108 - C4 -4J95 4.5 ?
65 PsiBlast_CBE 74.9445%-108 - C4 -4J97 4.7 ?
103 PsiBlast_CBE 74.6944%-100 - C4 -4V01 11.5
94 PsiBlast_CBE 74.2044%-100 - C4 -5A4C 9.0 ?
76 PsiBlast_CBE 74.1045%-103 - C4 -1OEC 6.9
97 PsiBlast_CBE 73.5644% -85 - C4 -3TT0 8.1 FGFR1_HUMAN
66 PsiBlast_CBE 73.4845%-104 - C4 -4J97 4.9