@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : VRK1_HUMAN: (2015-10-22 )
MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRKKEIEESKEPGVEDTEWSNTQTEEAIQTRSRTRKRVQK

Atome Classification :

(7 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

REB_A_5(3OP5)
VRK1_HUMAN
[Raw transfer]




REB_A_5(3OP5)
VRK1_HUMAN
[Raw transfer]




REB_B_8(3OP5)
VRK1_HUMAN
[Raw transfer]




ATP_A_5(1CSN)
CKI1_SCHPO
[Raw transfer]




REB_D_15(3OP5)
VRK1_HUMAN
[Raw transfer]




REB_C_11(3OP5)
VRK1_HUMAN
[Raw transfer]




1QG_A_5(4KBK)
KC1D_HUMAN
[Raw transfer]




1QM_A_5(4KBA)
KC1D_HUMAN
[Raw transfer]




1QN_A_5(4KB8)
KC1D_HUMAN
[Raw transfer]




DTQ_A_3(4BTK)
TTBK1_HUMAN
[Raw transfer]




2KC_A_2(4NFN)
TTBK1_HUMAN
[Raw transfer]




15G_A_3(4HGT)
KC1D_HUMAN
[Raw transfer]




1QN_A_5(4KB8)
KC1D_HUMAN
[Raw transfer]




PFO_A_3(4TN6)
?
[Raw transfer]




1QJ_A_3(4KBC)
KC1D_HUMAN
[Raw transfer]




15G_A_3(4HGT)
KC1D_HUMAN
[Raw transfer]




ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]




STU_B_2(1BYG)
CSK_HUMAN
[Raw transfer]




37 HHSearch 88.2897% -92 - C1 -3OP5 7.0 VRK1_HUMAN
4 PsiBlast_PDB 88.0996% -92 - C1 -3OP5 7.0 VRK1_HUMAN
23 PsiBlast_CBE 87.2596% -91 - C1 -3OP5 5.5 VRK1_HUMAN
22 PsiBlast_CBE 86.9196% -99 - C1 -3OP5 6.4 VRK1_HUMAN
21 PsiBlast_CBE 86.6896% -96 - C1 -3OP5 5.7 VRK1_HUMAN
42 HHSearch 64.9132% -85 - C1 -4HGT 5.0 KC1D_HUMAN
40 HHSearch 62.9731% -96 - C1 -4KB8 6.0 KC1D_HUMAN