@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : VRK2_HUMAN: (2015-10-22 )
MPPKRNEKYKLPIPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQSINVHTPNSQKVDSQKAATKQVNKAHNRLIEKKVHSERSAESCATWKVQKEEKLIGLMNNEAAQESTRRRQKYQESQEPLNEVNSFPQKISYTQFPNSFYEPHQDFTSPDIFKKSRSPSWYKYTSTVSTGITDLESSTGLWPTISQFTLSEETNADVYYYRIIIPVLLMLVFLALFFL

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1QN_A_5(4KB8)
KC1D_HUMAN
[Raw transfer]



ATP_A_5(1CSN)
CKI1_SCHPO
[Raw transfer]



REB_B_8(3OP5)
VRK1_HUMAN
[Raw transfer]



REB_A_5(3OP5)
VRK1_HUMAN
[Raw transfer]



REB_A_5(3OP5)
VRK1_HUMAN
[Raw transfer]



1QN_A_5(4KB8)
KC1D_HUMAN
[Raw transfer]



1QG_C_14(4KBK)
KC1D_HUMAN
[Raw transfer]



1QG_B_10(4KBK)
KC1D_HUMAN
[Raw transfer]



1QM_C_11(4KBA)
KC1D_HUMAN
[Raw transfer]



1QN_C_11(4KB8)
KC1D_HUMAN
[Raw transfer]



0CK_B_8(3UYT)
KC1D_HUMAN
[Raw transfer]



1QG_A_5(4KBK)
KC1D_HUMAN
[Raw transfer]



1QO_B_8(4KB8)
KC1D_HUMAN
[Raw transfer]



0CK_D_13(3UYT)
KC1D_HUMAN
[Raw transfer]



0CK_C_10(3UYT)
KC1D_HUMAN
[Raw transfer]



DTQ_A_3(4BTK)
TTBK1_HUMAN
[Raw transfer]



0CK_A_3(3UZP)
KC1D_HUMAN
[Raw transfer]



1QG_D_18(4KBK)
KC1D_HUMAN
[Raw transfer]



386_A_12(4TW9)
KC1D_HUMAN
[Raw transfer]



1QM_D_14(4KBA)
KC1D_HUMAN
[Raw transfer]



1QJ_A_3(4KBC)
KC1D_HUMAN
[Raw transfer]



REB_C_11(3OP5)
VRK1_HUMAN
[Raw transfer]



1QM_B_8(4KBA)
KC1D_HUMAN
[Raw transfer]



37J_B_18(4TWC)
KC1D_HUMAN
[Raw transfer]



1QM_A_5(4KBA)
KC1D_HUMAN
[Raw transfer]



0CK_B_4(3UZP)
KC1D_HUMAN
[Raw transfer]



0CK_A_5(3UYT)
KC1D_HUMAN
[Raw transfer]



386_B_20(4TW9)
KC1D_HUMAN
[Raw transfer]



15G_A_3(4HGT)
KC1D_HUMAN
[Raw transfer]



2KC_A_2(4NFN)
TTBK1_HUMAN
[Raw transfer]



REB_D_15(3OP5)
VRK1_HUMAN
[Raw transfer]



PFO_A_3(4TN6)
?
[Raw transfer]



37J_A_9(4TWC)
KC1D_HUMAN
[Raw transfer]



1QO_D_14(4KB8)
KC1D_HUMAN
[Raw transfer]



15G_B_4(4HGT)
KC1D_HUMAN
[Raw transfer]



16W_A_3(4HNF)
KC1D_HUMAN
[Raw transfer]



16W_B_9(4HNI)
KC1E_HUMAN
[Raw transfer]



15G_A_3(4HGT)
KC1D_HUMAN
[Raw transfer]



16W_A_3(4HNI)
KC1E_HUMAN
[Raw transfer]



16W_B_4(4HNF)
KC1D_HUMAN
[Raw transfer]
74 HHSearch 78.2954% -92 - C1 -3OP5 6.4 VRK1_HUMAN
23 PsiBlast_CBE 77.3955%-104 - C1 -3OP5 6.0 VRK1_HUMAN
24 PsiBlast_CBE 76.2055% -97 - C1 -3OP5 6.0 VRK1_HUMAN
5 PsiBlast_PDB 75.8655% -96 - C1 -3OP5 6.4 VRK1_HUMAN
22 PsiBlast_CBE 71.0955% -97 - C1 -3OP5 5.4 VRK1_HUMAN
78 HHSearch 61.5232%-102 - C1 -4KB8 5.6 KC1D_HUMAN
77 HHSearch 60.8132% -95 - C1 -4HGT 5.6 KC1D_HUMAN
61 PsiBlast_CBE 58.4334% -88 - C1 -4TW9 6.0 KC1D_HUMAN
39 PsiBlast_CBE 58.2034% -91 - C1 -4KBK 7.0 KC1D_HUMAN
60 PsiBlast_CBE 57.8034% -86 - C1 -4TW9 5.4 KC1D_HUMAN
58 PsiBlast_CBE 57.6934% -85 - C1 -4TWC 5.6 KC1D_HUMAN
40 PsiBlast_CBE 57.5334% -85 - C1 -4KBK 7.1 KC1D_HUMAN
45 PsiBlast_CBE 57.3834% -91 - C1 -4KB8 6.9 KC1D_HUMAN
46 PsiBlast_CBE 56.9534% -86 - C1 -4KB8 6.2 KC1D_HUMAN
41 PsiBlast_CBE 56.5634% -90 - C1 -4KBA 7.6 KC1D_HUMAN
59 PsiBlast_CBE 56.3934% -83 - C1 -4TWC 5.8 KC1D_HUMAN
50 PsiBlast_CBE 55.9734% -86 - C1 -3UYT 7.7 KC1D_HUMAN
43 PsiBlast_CBE 55.9634% -84 - C1 -4KBA 7.8 KC1D_HUMAN
56 PsiBlast_CBE 55.9434% -85 - C1 -4KBC 6.4 KC1D_HUMAN
17 PsiBlast_PDB 55.8734% -84 - C1 -3UZP 8.1 KC1D_HUMAN
14 PsiBlast_PDB 55.8034% -88 - C1 -4KBK 6.6 KC1D_HUMAN
10 PsiBlast_PDB 55.5334% -87 - C1 -4TN6 7.8 ?
51 PsiBlast_CBE 55.2734% -83 - C1 -3UYT 7.5 KC1D_HUMAN
52 PsiBlast_CBE 55.2034% -85 - C1 -3UYT 7.1 KC1D_HUMAN
16 PsiBlast_PDB 55.1934% -85 - C1 -3UYT 7.5 KC1D_HUMAN
42 PsiBlast_CBE 55.0134% -87 - C1 -4KBA 7.6 KC1D_HUMAN
37 PsiBlast_CBE 54.9534% -89 - C1 -4HNI 7.6 KC1E_HUMAN
18 PsiBlast_PDB 54.6834% -83 - C1 -4HNF 6.6 KC1D_HUMAN
49 PsiBlast_CBE 54.2534% -89 - C1 -3UZP 7.8 KC1D_HUMAN
13 PsiBlast_PDB 54.1434% -94 - C1 -4KBA 7.5 KC1D_HUMAN
38 PsiBlast_CBE 54.0534% -91 - C1 -4KBK 6.4 KC1D_HUMAN
48 PsiBlast_CBE 53.5734% -91 - C1 -4HGT 6.5 KC1D_HUMAN
44 PsiBlast_CBE 53.4134% -93 - C1 -4KB8 5.9 KC1D_HUMAN
8 PsiBlast_PDB 53.3834% -87 - C1 -4HNI 6.2 KC1E_HUMAN
47 PsiBlast_CBE 53.3534% -80 - C1 -4HNF 7.7 KC1D_HUMAN